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Oryza sativa
cluster # 7422 cluster # 7422       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7422#0 length = 2053 sequences # 4  

consensusID : consensus_7422#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2053
fasta sequence
                              [CCATTCATTGCATGAATGAAGAAAGAACAGCTAGTGGTATGGTAACAGTAGTAATGGCAGCAGTTAGCCACAGCAACTGCTCCCCCTCCTCTGCTTGCTGCTGCCACTACTGCCCTGCCCTCCTTGAGTTGGGTGAGTGAGTGACAGTAGTGTGTGTGGTGTAGTGGTAGGAGAGGAGGAGTATCTCTTGTATGGCTGTGGCCTGTAGTAGGCTGTAGCCCCAAACCTCTTGTCTCCTTTTCCCCTCCTCTCTCTCCCCCACTCTACTTCAGTTCTTTGCTTGTTTGCTAGCTTCTCTCATTGCCTCTCTTGTTGCTTGATGCTTTTAGGGAGAGTAGAGTGGTGTAGTGTAGTGTTGAATCCTCCTCCACATCTTGGAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGTCTTCAAAGGCTTATCTTGGGTGAAGAAGCACCTGAAGCTTCCATCATTTTTGCTTTAATGGTGGTGGTCTTGGGGAAACTTCTGAAGAAATCTCCGGGGGAAAGATTGCTGCTTTGCTGCTGGTTTCGCGGCAAATCTTGATTGATTGCGTTGGAAGAGGTCGGCTTCGTGAAGGAATCTTGCTTGCGGGATCAATCGCCTCCGCTCGCTTGCTTGCTTTTTGGGCGGTTCTTGGTGCTGCTTTATTGGGGTGAAAGGTTGGGGGATCTCGCGGCCACTCGAGGTAGCGAGCGATCTCCCCGCGGCTTCTCCTCGTTGCCGGCATTGCGGGGGAGGCGAGCTCGCCGCCGGGTCGCTTGTTGATGCGGTGAGGCGGCGGAGCGGAGCTTCTCGCTGTGCTGCTGCTGCGGCGGCCGCCAGGTGTTCGGTGAAAGGCGCGAGCAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGGAGAGCGGCGTCCAGATCGCGGACGCGT-CGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGGCGCAGAATCTGGTGACCTGCCTCTACCAGGCGCAGT-TCTCGGGCCGGCCATGCGTGATCTCGGTGACCTGGAGCAAGAGCCTCATGGGGCAAGGGCTCAGCATTGGCGTGGACGATCTGTCCAACCAGTGCCTGTGCAAGGCAGACATCAAGCCATGGCTCTTCTCCAAGAAGAAGGGCTCCAAGAGGCTTGACGTCGAGGACGGCAAGATTGAGATCTTCTGGGACCTGTCCGGTGCCAAGTTTGGTGCTGGGCCAGAGCCAATGGAAGGGTTCTATGTCGCCGTGGTGTTTGACCTTGAGCTGATACTCCTGCTCGGCGACATGAAGAAGGATGCATACCGGAAGACCGGCGCAAACCGGCCGATGCTGAATGCTGCATTTGTGGCTAGGAGGGAGCACATATATGGGAAGAAGATTTACACTGCCAAGGCACAATTCTGTGAAAATGGTCAATTCCATGATGTTGTGATAGAGTGTGACACCGTCAGCCTCAAGGATCCATGTCTTGAGATACGGGTCGACAAGAAGCCCGTCATGCAGGTGAAGCGTCTGGCTTGGAAATTTAGGGGAAACCAGACAATTCTTGTGGATGGTTTGCCCGTGGAGGTGTTCTGGGATGTCCACAGTTGGCTGTTTGGATTGACGACAAGCAATGCGGTGTTCATGTTTCAGACATGCCAAGCACCTGAGAAGTCGATGCCTTGGTCATACTCGCAGGTTTTTAGGGAGTCTCAGTTGCAGGGTCTTGGTTTCTCGCTGATCCTATATGCATGGAAGCTTGAATAGGTTCTTGCAGAATCATAATTTGCTTCTGCAATTGCCTCCGTTTTAGTGCTAACGGGATGTTTATTGAGTGTCAATTCTTGGAAATGTTATGGAGGCTCTCCAATATATGTTCTTTCAATTTTTCTTGGTTTTGCCATCTTTTATAAACACTGTTTGAATAGTTTGGCAGGATTCTGTGACAATCCTGTGATTCTCAAATTCCCTTCCTTTTGCTCCTAATGCTCTCAATAGTTTACTGTGGCAATGCTCCAAGAAAGAATGTTGTCATGATGTAAAGTACTTCAAAGTTCGGATATAGATTATTT]

[+] EMBL AK067603             [CCATTCATTGCATGAATGAAGAAAGAACAGCTAGTGGTATGGTAACAGTAGTAATGGCAGCAGTTAGCCACAGCAACTGCTCCCCCTCCTCTGCTTGCTGCTGCCACTACTGCCCTGCCCTCCTTGAGTTGGGTGAGTGAGTGACAGTAGTGTGTGTGGTGTAGTGGTAGGAGAGGAGGAGTATCTCTTGTATGGCTGTGGCCTGTAGTAGGCTGTAGCCCCAAACCTCTTGTCTCCTTTTCCCCTCCTCTCTCTCCCCCACTCTACTTCAGTTCTTTGCTTGTTTGCTAGCTTCTCTCATTGCCTCTCTTGTTGCTTGATGCTTTTAGGGAGAGTAGAGTGGTGTAGTGTAGTGTTGAATCCTCCTCCACATCTTGGAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGTCTTCAAAGGCTTATCTTGGGTGAAGAAGCACCTGAAGCTTCCATCATTTTTGCTTTAATGGTGGTGGTCTTGGGGAAACTTCTGAAGAAATCTCCGGGGGAAAGATTGCTGCTTTGCTGCTGGTTTCGCGGCAAATCTTGATTGATTGCGTTGGAAGAGGTCGGCTTCGTGAAGGAATCTTGCTTGCGGGATCAATCGCCTCCGCTCGCTTGCTTGCTTTTTGGGCGGTTCTTGGTGCTGCTTTATTGGGGTGAAAGGTTGGGGGATCTCGCGGCCACTCGAGGTAGCGAGCGATCTCCCCGCGGCTTCTCCTCGTTGCCGGCATTGCGGGGGAGGCGAGCTCGCCGCCGGGTCGCTTGTTGATGCGGTGAGGCGGCGGAGCGGAGCTTCTCGCTGTGCTGCTGCTGCGGCGGCCGCCAGGTGTTCGGTGAAAGGCGCGAGCAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGGAGAGCGGCGTCCAGATCGCGGACGCGT CGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGGCGCAGAATCTGGTGACCTGCCTCTACCAGGCGCAGT TCTCGGGCCGGCCATGCCTGATCTCGGTGACCTGGAGCAAGAGCCTCATGGGGCAAGGGCTCAGCATTGGCGTGGACGATCTGTCCAACCAGTGCCTGTGCAAGGCAGACATCAAGCCATGGCTCTTCTCCAAGAAGAAGGGCTCCAAGAGGCTTGACGTCGAGGACGGCAAGATTGAGATCTTCTGGGACCTGTCCGGTGCCAAGTTTGGTGCTGGGCCAGAGCCAATGGAAGGGTTCTATGTCGCCGTGGTGTTTGACCTTGAGCTGATACTCCTGCTCGGCGACATGAAGAAGGATGCATACCGGAAGACCGGCGCAAACCGGCCGATGCTGAATGCTGCATTTGTGGCTAGGAGGGAGCACATATATGGGAAGAAGATTTACACTGCCAAGGCACAATTCTGTGAAAATGGTCAATTCCATGATGTTGTGATAGAGTGTGACACCGTCAGCCTCAAGGATCCATGTCTTGAGATACGGGTCGACAAGAAGCCCGTCATGCAGGTGAAGCGTCTGGCTTGGAAATTTAGGGGAAACCAGACAATTCTTGTGGATGGTTTGCCCGTGGAGGTGTTCTGGGATGTCCACAGTTGGCTGTTTGGATTGACGACAAGCAATGCGGTGTTCATGTTTCAGACATGCCAAGCACCTGAGAAGTCGATGCCTTGGTCATACTCGCAGGTTTTTAGGGAGTCTCAGTTGCAGGGTCTTGGTTTCTCGCTGATCCTATATGCATGGAAGCTTGAATAGGTTCTTGCAGAATCATAATTTGCTTCTGCAATTGCCTCCGTTTTAGTGCTAACGGGATGTTTATTGAGTGTCAATTCTTGGAAATGTTATGGAGGCTCTCCAATATATGTTCTTTCAATTTTTCTTGGTTTTGCCATCTTTTATAAACACTGTTTGAATAGTTTGGCAGGATTCTGTGACAATCCTGTGATTCTCAAATTCCCTTCCTTTTGCTCCTAATGCTCTCAATAGTTTACTGTGGCAATGCTCCAAGAAAGAATGTTGTCATGATGTAAAGTACTTCAAAGTTCGGATATAGATTATTT]
[+] EMBL AK062034             [                                                                                                                                                                                                                                                                                                                      TGTTGCTTGATGCTTTTAGGGAGAGTAGAGTGGTGTAGTGTAGTGTTGAATCCTCCTCCACATCTTGGAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGTCTTCAAAGGCTTATCTTGGGTGAAGAAGCACCTGAAGCTTCCATCATTTTTGCTTTAATGGTGGTGGTCTTGGGGAAACTTCTGAAGAAATCTCCGGGGGAAAGATTGCTGCTTTGCTGCTGGTTTCGCGGCAAATCTTGATTGATTGCGTTGGAAGAGGTCGGCTTCGTGAAGGAATCTTGCTTGCGGGATCAATCGCCTCCGCTCGCTTGCTTGCTTTTTGGGCGGTTCTTGGTGCTGCTTTATTGGGGTGAAAGGTTGGGGGATCTCGCGGCCACTCGAGGTAGCGAGCGATCTCCCCGCGGCTTCTCCTCGTTGCCGGCATTGCGGGGGAGGCGAGCTCGCCGCCGGGTCGCTTGTTGATGCGGTGAGGCGGCGGAGCGGAGCTTCTCGCTGTGCTGCTGCTGCGGCGGCCGCCAGGTGTTCGGTGAAAGGCGCGAGCAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGGAGAGCGGCGTCCAGATCGCGGACGCGT CGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGGCGCAGAATCTGGTGACCTGCCTCTACCAGGCGCAGT TCTCGGGCCGGCCATGCGTGATCTCGGTGACCTGGAGCAAGAGCCTCATGGGGCAAGGGCTCAGCATTGGCGTGGACGATCTGTCCAACCAGTGCCTGTGCAAGGCAGACATCAAGCCATGGCTCTTCTCCAAGAAGAAGGGCTCCAAGAGGCTTGACGTCGAGGACGGCAAGATTGAGATCTTCTGGGACCTGTCCGGTGCCAAGTTTGGTGCTGGGCCAGAGCCAATGGAAGGGTTCTATGTCGCCGTGGTGTTTGACCTTGAGCTGATACTCCTGCTCGGCGACATGAAGAAGGATGCATACCGGAAGACCGGCGCAAACCGGCCGATGCTGAATGCTGCATTTGTGGCTAGGAGGGAGCACATATATGGGAAGAAGATTTACACTGCCAAGGCACAATTCTGTGAAAATGGTCAATTCCATGATGTTGTGATAGAGTGTGACACCGTCAGCCTCAAGGATCCATGTCTTGAGATACGGGTCGACAAGAAGCCCGTCATGCAGGTGAAGCGTCTGGCTTGGAAATTTAGGGGAAACCAGACAATTCTTGTGGATGGTTTGCCCGTGGAGGTGTTCTGGGATGTCCACAGTTGGCTGTTTGGATTGACGACAAGCAATGCGGTGTTCATGTTTCAGACATGCCAAGCACCTGAGAAGTCGATGCCTTGGTCATACTCACAGGTTTTTAGGGAGTCTCAGTTGCAGGGTCTTGGTTTCTCGCTGATCCTATATGCATGGAAGCTTGAATAGGTTCTTGCAGAATCATAATTTGCTTCTGCAATTGCCTCCGTTTTAGTGCTAACGGGATGTTTATTGAGTGTCAATTCTTGGAAATGTTATGGAGGCTCTCCAATATATGT                                                                                                                                                                                                   ]
[-] EMBL AU082752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGAAAGGCGCGA CAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGGAGAGCGGCGTCCAGATCGCGGACGCGTACGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGGCGCAGAATCTGGTGANCTGCCTCTACCAGGCGCA T TCTCGGGCCGGACATGCGTGATCTCGGTGACCTGGAGCAAGAGCCTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AU082750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCGCGA CAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGGAGAGCGGCGTCCAGATCGCGGACGCGT CGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGGCGCAGAATCTGGTGACCTGCCTCTACCAGGCGCAGTGGGNCGGGNCGGCNNTTTNTTATCTCGGTGACCTGGAGCAAGANCCTCATGGGGCAAGGGCTCAGCATTGGCGTGGACGATCTGTCCAACCAGTGCCTGTGCAAGGCAGACATCAAGCCATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_7422#0 CCATTCATTGCATGAATGAAGAAAGAACAGCTAGTGGTATGGTAACAGTAGTAATGGCAG CAGTTAGCCACAGCAACTGCTCCCCCTCCTCTGCTTGCTGCTGCCACTACTGCCCTGCCC TCCTTGAGTTGGGTGAGTGAGTGACAGTAGTGTGTGTGGTGTAGTGGTAGGAGAGGAGGA GTATCTCTTGTATGGCTGTGGCCTGTAGTAGGCTGTAGCCCCAAACCTCTTGTCTCCTTT TCCCCTCCTCTCTCTCCCCCACTCTACTTCAGTTCTTTGCTTGTTTGCTAGCTTCTCTCA TTGCCTCTCTTGTTGCTTGATGCTTTTAGGGAGAGTAGAGTGGTGTAGTGTAGTGTTGAA TCCTCCTCCACATCTTGGAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAA GTCTTCAAAGGCTTATCTTGGGTGAAGAAGCACCTGAAGCTTCCATCATTTTTGCTTTAA TGGTGGTGGTCTTGGGGAAACTTCTGAAGAAATCTCCGGGGGAAAGATTGCTGCTTTGCT GCTGGTTTCGCGGCAAATCTTGATTGATTGCGTTGGAAGAGGTCGGCTTCGTGAAGGAAT CTTGCTTGCGGGATCAATCGCCTCCGCTCGCTTGCTTGCTTTTTGGGCGGTTCTTGGTGC TGCTTTATTGGGGTGAAAGGTTGGGGGATCTCGCGGCCACTCGAGGTAGCGAGCGATCTC CCCGCGGCTTCTCCTCGTTGCCGGCATTGCGGGGGAGGCGAGCTCGCCGCCGGGTCGCTT GTTGATGCGGTGAGGCGGCGGAGCGGAGCTTCTCGCTGTGCTGCTGCTGCGGCGGCCGCC AGGTGTTCGGTGAAAGGCGCGAGCAAGCGAGCATGAGGGACTTCCCTTCCTGCTTCGGGG AGAGCGGCGTCCAGATCGCGGACGCGTCGTCGTCGTCGTCGAGCGCCGGAAAGGGCGCGG CGCAGAATCTGGTGACCTGCCTCTACCAGGCGCAGTTCTCGGGCCGGCCATGCGTGATCT CGGTGACCTGGAGCAAGAGCCTCATGGGGCAAGGGCTCAGCATTGGCGTGGACGATCTGT CCAACCAGTGCCTGTGCAAGGCAGACATCAAGCCATGGCTCTTCTCCAAGAAGAAGGGCT CCAAGAGGCTTGACGTCGAGGACGGCAAGATTGAGATCTTCTGGGACCTGTCCGGTGCCA AGTTTGGTGCTGGGCCAGAGCCAATGGAAGGGTTCTATGTCGCCGTGGTGTTTGACCTTG AGCTGATACTCCTGCTCGGCGACATGAAGAAGGATGCATACCGGAAGACCGGCGCAAACC GGCCGATGCTGAATGCTGCATTTGTGGCTAGGAGGGAGCACATATATGGGAAGAAGATTT ACACTGCCAAGGCACAATTCTGTGAAAATGGTCAATTCCATGATGTTGTGATAGAGTGTG ACACCGTCAGCCTCAAGGATCCATGTCTTGAGATACGGGTCGACAAGAAGCCCGTCATGC AGGTGAAGCGTCTGGCTTGGAAATTTAGGGGAAACCAGACAATTCTTGTGGATGGTTTGC CCGTGGAGGTGTTCTGGGATGTCCACAGTTGGCTGTTTGGATTGACGACAAGCAATGCGG TGTTCATGTTTCAGACATGCCAAGCACCTGAGAAGTCGATGCCTTGGTCATACTCGCAGG TTTTTAGGGAGTCTCAGTTGCAGGGTCTTGGTTTCTCGCTGATCCTATATGCATGGAAGC TTGAATAGGTTCTTGCAGAATCATAATTTGCTTCTGCAATTGCCTCCGTTTTAGTGCTAA CGGGATGTTTATTGAGTGTCAATTCTTGGAAATGTTATGGAGGCTCTCCAATATATGTTC TTTCAATTTTTCTTGGTTTTGCCATCTTTTATAAACACTGTTTGAATAGTTTGGCAGGAT TCTGTGACAATCCTGTGATTCTCAAATTCCCTTCCTTTTGCTCCTAATGCTCTCAATAGT TTACTGTGGCAATGCTCCAAGAAAGAATGTTGTCATGATGTAAAGTACTTCAAAGTTCGG ATATAGATTATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)