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Oryza sativa
cluster # 7431 cluster # 7431       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7431#0 length = 1777 sequences # 4  

consensusID : consensus_7431#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1777
fasta sequence
                              [CGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGAC-AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATT-GGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTC-GGGTTCACTTC-AAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGAGTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGTTGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGTACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTGAATTGCCCATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTT]

[+] EMBL AK071058             [CGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTCGTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCGGGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTATGGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGAC AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATT GGGAAACAGGCGTACTCGAACTGGCTTTATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGACCCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGTGCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGGGCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTCGAGTGGCGGCTC GGGTTCACTTC AAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGAGTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGTTGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGTACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTGAATTGCCCATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTT]
[+] EMBL AU182378             [                                                                                                                                                                                                                                                                                                                                              TCTCCTGGTCTCGCATTTTCCCCAGTGGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATGCTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTCCATGANCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCAGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTNTTCCCCCCTGGCAGATGCACCGGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGTGACAAAGTACCAGGCTATTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA765065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCCAGAATTGTGAGAGATTTTGTGAGATATGCGGACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCTAGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCAGCTGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTTTCACATGCCGCTGCTGTCAGGACATATCGCGAC AAGTACCAGGCTATTCAGAAGGGGAAGATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCACGCAGCTGCACATAGAGCCAGGGAGTTCACCCTTGGCTGGTACCTGCACCCGATTATATATGGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGTGAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACTTATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTGAAAATTTCATATGAGCGTAACGGTGTGCCAATTGGGGAAACAGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU182379             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCAGGATACAATNTTTTGATCAGTACCTCCATAAGCTTNAGAGGGCGANCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCNGCTTGACAACTTCGAGTGGCGGCTCAGGGTTCACTTCTANAATTCGGAATCGTCTATGTAGACCGGAGCACTTTCGCACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAACATGATAAAAAGTNAGGTTTGAGTTGNATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGAAAAANGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGNACTTCTAGTATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCAGGACATCTATATAaaaaa                                                                               ]


>consensus_7431#0 CGCTCTCTCTTCCTCTCCAACATGAATATGCCATTGCTACTCCTCATCGCCATCGTCGTC GTCTCCCTCTCCCATGGCAACGGGGAGCAGACCGACCTCACGCGGGAGACGTTCCCCGCG GGCTTCGTCTTCGGCACCGCGTCGTCGGCGTACCAGGTGGAGGGGAACGCCCTCCAGTAT GGCCGAGGGCCCTGCATCTGGGACACCTTCCTGATGCAACCTGGTGTAACTCCTGATAAT TCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGGATGATGTGGACAACATG GTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCAGT GGACTTGGGAAGATTAACAAAGACGGCGTGGATTATTACCACAGGCTCATTGATTACATG CTTGCTAACAACATTATTCCATATGTTGTGCTCTACCACTACGACCTTCCACAGGTGCTC CATGATCAATACAAGGGATGGCTACACCCCAGAATTGTGAGAGATTTTGTGAGATTTGCA GACTTCTGCTTCAAGACATATGGTCATAAGGTGAAGAACTGGTTTACCATTAACGAACCT AGGATGATGGCAAATCATGGCTACGGTGACGGCTTCTTCCCCCCTGGCAGATGCACCGGC TGCCAACCCGGTGGGAATTCCGCCACCGAGCCTTACATCGCAGCCCATAACCTTCTCCTT TCACATGCCGCTGCTGTCAGGACATATCGTGACAAGTACCAGGCTATTCAGAAGGGGAAG ATTGGCATCCTTCTCGATTTTGTATGGTATGAGCCACTCACCGACAAAGAAGAGGATCAC GCAGCTGCACATAGAGCCAGGGAGTTTACCCTTGGCTGGTACCTGCACCCGATTACATAT GGTCATTACCCAGAAACTATGCAGAATGCTGTTAAGGAAAGGCTGCCCAATTTCACACGT GAGCAGTCTGAGATGATAAAAGGATCAGCGGATTATATTGCGATCAACCATTACACAACT TATTATGTCAGTCACCACGTCAACAAGACATCCATCAGCTATCTCAATGATTGGGATGTG AAAATTTCATATGAGCGTAACGGTGTGCCAATTGGGAAACAGGCGTACTCGAACTGGCTT TATGTTGTTCCTTGGGGGATCTACAAAGCTGTCATGCATGTCAAGGAGAAGTACAAGGAC CCCATTATAATCATCGGAGAAAATGGCATTGACCAGCCAGGCAATGAGACCCTACCTGGT GCACTGTATGACTTCTTCAGGATACAATATTTTGATCAGTACCTCCATGAGCTTAAGAGG GCGATCAAGGATGGTGCAAGGGTCACTGGGTATTTTGCTTGGTCCCTGCTTGACAACTTC GAGTGGCGGCTCGGGTTCACTTCAAAATTCGGAATCGTCTATGTAGACCGGAGCACTTTC ACACGGTACCCTAAAGACTCAACACGTTGGTTCAGGAAGATGATAAAAAGTGAGGTTTGA GTTGGATTATTATCACTGTTGGCAGCTGCTGGAGTGCTTTTTTGTTATGCTAGTTTTGGT TGTATGAATAATAAGATGTCTTGTACTAGTTGAGAACTTCTTCAGATTTTGTACTTCTAG TATTCTACTTTTTGTACTTCAGATTTTGCAAGCAAGGATGATTTTAGTTTAATAGATTCA GGACATCTATATATACTGGTGATAAGAGAGGCAGATTTCAATTTTTGGCTTGAATTGCCC ATATTTGTGTTTTCCAATGTTTTTTAACTTCAAATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)