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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7440 cluster # 7440       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7440#0 length = 1055 sequences # 4  

consensusID : consensus_7440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1055
fasta sequence
                              [TTTTTTTTTTTTTTTTTAATTGGGAACATTCCAATCTTGACAAAGTAAGTTTCTGGCATCTGATTCCACATGTAAATGACACCAAGAAAAAACAGCATATCTTGCTCAACAAAAAGGGTGTTAAATTGAACTTACAGCTAAAGTGGATGGCAAAGAAAAACAAAACAATATACTGAATAAACTTTGTTTTGTTTTCCCTTCCCAGTCCGAAGTATACAGTTTTAGGGAATTCCTACATCAAATCAATTCCATAAAAAACGGATCACCTGAAGCCATGACTCTAATTAGCTCTACAAAATCTATCTCATTCTGAACCTTCATTGGGTACACTGCATGTGCTTGAGCAGTGTATATTGTTGCAAAAGTGGCATTTGATGGCACATTTGTCCTATAAATAAGTTTGGTCAAAGCTTTTGATTCAAAATTGCTTGGCAAATCCATTGCAAGGAACAACATGGGGATAGCAATACTGTGATGAATGTCTAAGCTTCCAATAGCTTGAACTAGATAAGAAAAGTCACCAATGTGACTTCGAGGTATGTAGAATATCTCACTATTGCAATGAATTATCTTATCTTCGCCAACACTTCTTTTGTAGTTGGCTTGATATTGAAATGGAAAGCTAGCAATTGCCTTTTTTACCATATCTCCTTGGTTAATGAACCATTCAATTTTATTGCCATGTAAGGGGACATCGGACCATGATTCCTTCACCTTGTTGGTTATCCAGAGCTTAGCCTTGTCAAAATCATAGAGGTTCCAATAATTGAGGATCATATGATCCTGAAGGAACATAAATCCCCCAGCACCTGCAAACCGGTCAAACACCTTTGGCAAGAACTTGTAAGCTTGTGCCAAGTTGCTGACTTCAACAGCAAGATCTGAATTGCTTTTCTCTGAAAGAATAACAACTGCCCTGAATATACGACCATAAAGCAATCTCCACTCAAGTGCAACACGGTCCACAGGTACGGTGCAGTGCACTATAAGCACAACATCACCAAAGTGCTTCCTCCATTTTATGAGATTTCCAATCTCAGTGCTAACTTCCCCAA]

[+] EMBL CA762284             [TTTTTTTTTTTTTTTTTAATTGGGAACATTCCAATCTTGACAAAGTAAGTTTCTGGCATCTGATTCCACATGTAAATGACACCAAGAAAAAACAGCATATCTTGCTCAACAAAAAGGGTGTTAAATTGAACTTACAGCTAAAGTGGATGGCAAAGAAAAACAAAACAATATACTGAATAAACTTTGTTTTGTTTTCCCTTCCCAGTCCGAAGTATACAGTTTTAGGGAATTCCTACATCAAATCAATTCCATAAAAAACGGATCACCTGAAGCCATGACTCTAATTAGCTCTACAAAATCTATCTCATTCTGAACCTTCATTGGGTACACTGCATGTGCTTGAGCAGTGTATATTGTTGCAAAAGTGGCATTTGATGGCACATTTGTCCTATAAATAAGTTTGGTCAAAGCTTTTGATTCAAAATTGCTTGGCAAATCCATTGCAAGGAACAACATGGGGATAGCAATACTGTGATGAATGTCTAAGCTTCCAATAGCTTGAACTAGATAAGAAAAGTCACCAATGTGACTTCGAGGTATGTAGAATATCTCACTATTGCAATGAATTATCTTATCTTCGCCAACACTTCTTTTGTAGTTGGCTTGATATTGAAATGGAAAGCTAGCAATTGCCTTTTTTACCATATCTCCTTGGTTAATGAACCATTCAATTT                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CA999184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGGATAGCAATACTGTGATGAATGTCTAAGCTTCCAATAGCTTGAACTAGATAAGAAAAGTCACCAATGTGACTTCGAGGTATGTAGAATATCTCACTGTTGCAATGAATTATCTTATCTTCGCCAACACTTCTTTTGTAGTTGGCTTGATATTGAAATGGAAAGCTAGCAATTGCCTTTTTTACCATATCTCCTTGGTTAATGAACCATTCAATTTTATTGCCATGTAAGGGGACATCGGACCATGATTCCTTCACCTTGTTGGTTATCCAGAGCTTAGCCTTGTCAAAATCATAGAGGTTCCAATAATTGAGGATCATATGATCCTGAAGGAACATAAATCCCCCAGCACCTGCAAACCGGTCAAACACCTTTGGCAAGAACTTGTAAGCTTGTGCCAAGTTGCTGACTTCAACAGCAAGATCTGAATTGCTTTTCTCTGAAAGAATAACAACTGCCCTGAATATACGACCATAAAGCAATCTCCACTCAAGTGCAACACGGTCCACAGGTACGGTGCAGTGCACTATAAGCACAACATCACCAAAGTGCTTCCTCCATTTTATGAGATTTCCAATCTCAGTGCTAACTTCCCCAA]
[-] EMBL CA999188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGGTTCCAATAATTGAGGATCATATGATCCTGAAGGAACATAAATCCCCCAGCACCTGCAAACCGGTCAAACACCTATGGCAAGAGCTTGTAAGCATGTGCCAAGTTGCTGACTTCAACAGCAAGATCTGAATTGCTTTTCTATGAAAGAATAACATCTGCCCTGAATATACGACCATAAAGCAATCTCCACTCAAGTGCAACACGGTCCACAGGTACGGTGCAGTGCACTATAAGCTCAACATCACCAAAGTGCTTCCTCCATTTTATGAGATTTCCAATGTCAGTGCTAACTTCCCCAA]
[-] EMBL CA999739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTAAGCTTGTGCCAAGTTGCTGACTTCAACAGCAAGATCTGAATTGCTTTTCTCTGAAAGAATAACAACTGCCCTGAATATACGACCATAAAGCAATCTCCACTCAAGTGCAACACGGTCCACAGGTACGGTGCAGTGCACTATAAGCACAACATCACCAAAGTGCTTCCTCCATTTTATGAGATTTCCAATCTCAGTGCTAACTTCCCCAA]


>consensus_7440#0 TTTTTTTTTTTTTTTTTAATTGGGAACATTCCAATCTTGACAAAGTAAGTTTCTGGCATC TGATTCCACATGTAAATGACACCAAGAAAAAACAGCATATCTTGCTCAACAAAAAGGGTG TTAAATTGAACTTACAGCTAAAGTGGATGGCAAAGAAAAACAAAACAATATACTGAATAA ACTTTGTTTTGTTTTCCCTTCCCAGTCCGAAGTATACAGTTTTAGGGAATTCCTACATCA AATCAATTCCATAAAAAACGGATCACCTGAAGCCATGACTCTAATTAGCTCTACAAAATC TATCTCATTCTGAACCTTCATTGGGTACACTGCATGTGCTTGAGCAGTGTATATTGTTGC AAAAGTGGCATTTGATGGCACATTTGTCCTATAAATAAGTTTGGTCAAAGCTTTTGATTC AAAATTGCTTGGCAAATCCATTGCAAGGAACAACATGGGGATAGCAATACTGTGATGAAT GTCTAAGCTTCCAATAGCTTGAACTAGATAAGAAAAGTCACCAATGTGACTTCGAGGTAT GTAGAATATCTCACTATTGCAATGAATTATCTTATCTTCGCCAACACTTCTTTTGTAGTT GGCTTGATATTGAAATGGAAAGCTAGCAATTGCCTTTTTTACCATATCTCCTTGGTTAAT GAACCATTCAATTTTATTGCCATGTAAGGGGACATCGGACCATGATTCCTTCACCTTGTT GGTTATCCAGAGCTTAGCCTTGTCAAAATCATAGAGGTTCCAATAATTGAGGATCATATG ATCCTGAAGGAACATAAATCCCCCAGCACCTGCAAACCGGTCAAACACCTTTGGCAAGAA CTTGTAAGCTTGTGCCAAGTTGCTGACTTCAACAGCAAGATCTGAATTGCTTTTCTCTGA AAGAATAACAACTGCCCTGAATATACGACCATAAAGCAATCTCCACTCAAGTGCAACACG GTCCACAGGTACGGTGCAGTGCACTATAAGCACAACATCACCAAAGTGCTTCCTCCATTT TATGAGATTTCCAATCTCAGTGCTAACTTCCCCAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)