These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7472#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1179 fasta sequence [CGCAATGGCGCCTCCCTGCGGCGATGCCGCGGCGGCTGCCTCCGCCGCGCCCGGCCTGGCCAACCTGCTCATTCGCGAAGGCGCCGGCCTCCCTTCGCGTCCCGAACGGTACCCGCCATTCCGGCCCTGTACTTCTGATTCCTTTGCTCCAATCTCTAGGGAAGGGGACGATATTCCCCCCCAAAAAAAATCGGTTTCTTTACGCAGCGGCGGCGGCGGCAATGCGGCAGAGAGGGAGGAGGGCGGTGCGAACAGGAACGGGAAGAAGGAGAAGACCGGGGCGCAGAGGATCACCGGGTGGGGGCTCCGTGAGTTCAGCAAGATAGTTTCTAAGAAAGTTGAGGCCAAAGGAAGAACCACATATAATGAGGTTGCCGATGAGATTTTTGCGGAGCTGAAGTCCATTACGCAGAACGGTCTGGAGTTTGATGAGAAGAATATTAGGCGGAGGGTATATGATGCTTTCAATGTGCTCATTGCAATTCGTGTTATTGCAAAAGATAAAAAGGAGATAAAGTGGATGGGCCTTACTAATTATAGATACGAAAAGATACAGAAGTTGGAGGAAGTTCACAAAGAACTCATCACCAGGATCAAGAATAAGAAGAAGCTTCTCCAGGAAATTGAAAAGCAGTTTGATGACCTTCAGAATATTACATTACGCAACCAGGCTAGTCAGAGGCCAGCAGAAAGTGTTAATGGCATCCTCCTTCC-GTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCGAAGTTTGCACGGTTCGACTTCAACGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGT---AACAAAGGAAGAGCTGGCCTCTCCATTCACCCTTAAGAGGCACAAGAATGTGACAAAACCAATTGAAGTGTCAAAACTCAAAACTGGCACCACCAGTTTCTTTTGCACAGTTATGTATAGCTATAGCGTACCTTTCAGTATGGAAACTCGACCTAGTTTATAGGACAGTCTCTCAGGCTTTTTAGCAGATATGACCTGCGAATTTTGCCTCTTTTTTGTGCCTAGCAGGTGAGTCTGGAATAGTTTTTTCTTGCGTGTGCTGCTATGTATAAACTCAATTGCCGTTTCAATTCGAAGCTTGTGTACAAGCTCCATTGATGAAAAAA] [+] EMBL AK111611 [CGCAATGGCGCCTCCCTGCGGCGATGCCGCGGCGGCTGCCTCCGCCGCGCCCGGCCTGGCCAACCTGCTCATTCGCGAAGGCGCCGGCCTCCCTTCGCGTCCCGAACGGTACCCGCCATTCCGGCCCTGTACTTCTGATTCCTTTGCTCCAATCTCTAGGGAAGGGGACGATATTCCCCCCCAAAAAAAATCGGTTTCTTTACGCAGCGGCGGCGGCGGCAATGCGGCAGAGAGGGAGGAGGGCGGTGCGAACAGGAACGGGAAGAAGGAGAAGACCGGGGCGCAGAGGATCACCGGGTGGGGGCTCCGTGAGTTCAGCAAGATAGTTTCTAAGAAAGTTGAGGCCAAAGGAAGAACCACATATAATGAGGTTGCCGATGAGATTTTTGCGGAGCTGAAGTCCATTACGCAGAACGGTCTGGAGTTTGATGAGAAGAATATTAGGCGGAGGGTATATGATGCTTTCAATGTGCTCATTGCAATTCGTGTTATTGCAAAAGATAAAAAGAAGATAAAGTGGATGGGCCTTACTAATTATAGATACGAAAAGATACAGAAGTTGGAGGAAGTTCACAAAGAACTCATCACCAGGATCAAGAATAAGAAGAAGCTTCTCCAGGAAATTGAAAAGCAGTTTGATGACCTTCAGAATATTACATTACGCAACCAGGCTAGTCAGAGGCCAGCAGAAAGTGTTAATGGCATCCTCCTTCC GTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCGAAGTTTGCACGGTTCGACTTCAACGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGT AACAAAGGAAGAGCTGGCCTCTCCATTCACCCTTAAGAGGCACAAGAATGTGACAAAACCAATTGAAGTGTCAAAACTCAAAACTGGCACCACCAGTTTCTTTTGCACAGTTATGTATAGCTATAGCGTACCTTTCAGTATGGAAACTCGACCTAGTTTATAGGACAGTCTCTCAGGCTTTTTAGCAGATATGACCTGCGAATTTTGCCTCTTTTTTGTGCCTAGCAGGTGAGTATGGAATAGTTTTTTCTTGCGTGTGCTGCTATGTATAAACTCAATTGCCGTTTCAATTCGAAGCTTGT ] [+] EMBL AY224529 [ CCCTGCGGCGATGCCGCGGCGGCTGCCTCCGCCGCGCCCGGCCTGGCCAACCTGCTCATTCGCGAAGGCGCCGGCCTCCCTTCGCGTCCCGAACGGTACCCGCCATTCCGGCCCTGTACTTCTGATTCCTTTGCTCCAATCTCTAGGGAAGGGGACGATATTCCCCCCCAAAAAAAATCGGTTTCTTTACGCAGCGGCGGCGGCGGCAATGCGGCAGAGAGGGAGGAGGGCGGTGCGAACAGGAACGGGAAGAAGGAGAAGACCGGGGCGCAGAGGATCACCGGGTGGGGGCTCCGTGAGTTCAGCAAGATAGTTTCTAAGAAAGTTGAGGCCAAAGGAAGAACCACATATAATGAGGTTGCCGATGAGATTTTTGCGGAGCTGAAGTCCATTACGCAGAACGGTCTGGAGTTTGATGAGAAGAATATTAGGCGGAGGGTATATGATGCTTTCAATGTGCTCATTGCAATTCGTGTTATTGCAAAAGATAAAAAGGAGATAAAGTGGATGGGCCTTACTAATTATAGATACGAAAAGATACAGAAGTTGGAGGAAGTTCACAAAGAACTCATCACCAGGATCAAGAATAAGAAGAAGCTTCTCCAGGAAATTGAAAAGCAGTTTGATGACCTTCAGAATATTACATTACGCAACCAGGCTAGTCAGAGGCCAGCAGAAAGTGTTAATGGCATCCTCCTTCC GTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCGAAGTTTGCACGGTTCGACTTCAACGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGT AACAAAGGAAGAGCTGGCCTCTCCAT ] [+] EMBL CA764996 [ AGCTGAAGTCCATTACGCAGAACGGTCTGGAGTTTGATGAGAAGAATATTAGGCGGAGGGTATATGATGCTTTCAATGTGCTCATTGCAATTCGTGTTATTGCAAAAGATAAAAAGGAGATAAAGTGGATGGGCCTTACTAATTATAGATACGAAAAGATACAGAAGTTGGAGGAAGTTCACAAAGAACTCATCACCAGGATCAAGAATAAGAAGAAGCTTCTCCAGGAAATTGAAAAGCAGTTTGATGACCTTCAGAATATTACATTACGCAACCAGGCTAGTCAGAGGCCAGCAGAAAGTGTTAATGGCATCCTCCTTCC GTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCAAAGTTTGCACGGTTCGACTTCAACGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGTAACAACAAAGGAAGAGCTGGCCTCTCCATTCACCCTTAAGAGGCACAAGAATGTGACAAAACCAATTGAAGTGTCAAAACTCAAAACTGGCACCACCAGTTTCTTTTGCACAGTTATGTATAGCTATAGCGTACCTTTCAGTATGGAAACTCGACCTAGTTTATAGGACAGTCTCTCANGCTTTTTAGCAGATATGACCTGCGAATTTTGCCTCTTTTTTGTGCCTAACANGTGAGTCTGGAATAGTTTTTTCTTGCGNGNGCTGGTATGTATAAACTCAATTGC ] [+] EMBL BI802607 [ GAATA TACATTACGCAACCAGGCTAGTCAGAGGCCA CAGAAAGTGTTAATGGCATCCTCCTTCCGGTTCTTATTGATCAAGACATCCCGAAAAGCAAGGGTGGAAATTGAGATTTCGGAAGATTCAAAGTTTGCACGGTTCGACTTCAACGGTGCACCATTCACCATGCATGATGATGTATCAATCCTTGAAGCCATCAGGCGTAACAACAAAGGAAGAGCTGGCCTCTCCATTCACCCTTAAGAGGCACAAGAATGTGAC AAACC ATTGAAGTGTC AAACTCAAAACTGGCACCACCAGTTTCTTTTGCACAGTTATGTATAGCTATAGCGTACCTTTCAGTATGGAAACTCGACCTAGTTTATAGGACAGTCTCTCAGGCTTTTTAGCAGATATGACCTGCGAATTTTGCCTCTTTTTTGTGCCTAGCAGGTGAGTCTGGAATAGTTTTTTCTTGCGTGTGCTGTTATGTATAAACTC ATTGCCGTTTCAATTCGAAGCTTGTGTACAAGCTCCATTGATGAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||