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Oryza sativa
cluster # 7481 cluster # 7481       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7481#0 length = 744 sequences # 4  

consensusID : consensus_7481#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 744
fasta sequence
                              [CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGTTTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCGCCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA-CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC-AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAATCTGCGACAAAATTTGAGTTAGCGG]

[+] EMBL AK064140             [CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGTTTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCGCCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCT                                                                                               ]
[+] EMBL OSC20493             [                                                                                   GCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTAGCCTCCGCGGCTCCGCCTCGCGTAGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGNGGACGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGNCGGCGNGAGCAGGTGCCGGTGGTGCCGCAACGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTTCCCAACCAGGTGTTCTCTTGCGA  CCGNCCGCCG  AGCGTCG CCACGNCCGGAGATGACGATGC AG CTAGGCGGCCACTG TGTCGTC                                                                                                                                                                                                                                                                 ]
[+] EMBL AU225690             [                                                                                                                                                                                                                                                                                                                     gccgctGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAATCTGCGACAAAATTTGAGTTAGCGG]
[-] EMBL OSC100611            [                                                                                                                                                                                                                                                                                                                                                                                                                   AGGTGNTNTCTTGCGACCCCGCCC CCGGCGGCGTCNCCCACGCCCGGAGATGACGATGCAAGCCTAGGCGGCNACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGNTTGATATCGA                                                         ]


>consensus_7481#0 CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGT TTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCG CCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTG GCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGC AAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGG GAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGAT GACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGAC CCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGCAGCCTAGGCGGCCACTGC TGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTG AGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAG ACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATT TTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAAT CTGCGACAAAATTTGAGTTAGCGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)