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Oryza sativa
cluster # 7491 cluster # 7491       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7491#0 length = 718 sequences # 4  

consensusID : consensus_7491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 718
fasta sequence
                              [GCTGTAACATCACGAGGTGTGACAGCCATGACGAGATCATGCTTCCTGATAGTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGCGGCGGTGGCGGCATCCCGACCACCCTC-GGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTCCTCGGCGCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGGCCGGCGAGGAAGTCCGCCGCG-AACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTGCTGTGCGGCAAGAGGTGCTTCAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCCACCAAGTGCGTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAGATTTTCCTCCCTTGTACCGAGATTCCATTCCGCGGGTTGCCCCGGGGCCTCACCTCACGATCGATACCCATTCCTGTTCCTCGTCGTGATGTTAACTCTCCACAATTTACTTTCCTATATATATAGATTCAGTTGAATAAGCAGGCAAGTCTCATGCACGAGGTAGATAGGCAGGAGTTATAGAATTTGCTAAGTCGGATATAATTTTTCGCCCTCGTACTATGTTTCTTCCACGTGAATGATCGATGAACTGCACGAGCTA]

[+] EMBL AK064693             [GCTGTAACATCACGAGGTGTGACAGCCATGACGAGATCATGCTTCCTGATAGTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGCGGCGGTGGCGGCATCCCGACCACCCTC GGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTCCTCGGCGCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGGCCGGCGAGGAAGTCCGCCGCG AACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTGCTGTGCGGCAAGAGGTGCTTCAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCCACCAAGTGCGTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAGATTTTCCTCCCTTGTACCGAGATTCCATTCCGCGGGTTGCCCCGGGGCCTCACCTCACGATCGATACCCATTCCTGTTCCTCGTCGTGATGTTAACTCTCCACAATTTACTTTCCTATATATATAGATTCAGTTGAATAAGCAGGCAAGTCTCATGCACGAGGTAGATAGGCAGGAGTTATAGAATTTGCTAAGTCGGATATAATTTTTCGCCCTCGTACTATGTTTCTTCCACGTGAATGATCGATGAACTGCACGAGCTA]
[+] EMBL AU082994             [                   TGACAGCCATGACGAGATCATGCTTCCTGATAGTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGCGGCGGTGGCGGCATCCCGACCACCCTCGGGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTCCTCGGCNCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGGCCGGCGAGGAAGTCCGCCGCG AACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTGCTGTGCGGCAAGAGGTGCTACAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCCACCAAGTGCGTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAGATTTTCCTCCCTTGTACCGAGATTCCATTCCGCGGGTTGCCCCGGGGCCTCACCTCACGATCGATACCCATTCCTGTTCCTCGTCGTGATGTTAACTCTCCACAATTTACTTTCCTATATATATAGATTCAGTTGAATAAaaaa                                                                                                                      ]
[+] EMBL C74219               [                    GACAGCCATGACGAGATCATGCTTCCTGATAGTGCTCCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGG NANAGCGGCGTTGGCGGCATCCCGACCACCCTC GGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTCCTCGGCGCNGCGCCGCGGGNGCCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCANCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAAGCCGGCGA GAANTTCGCCGCGAAATTGAATCC                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C74181               [                                                    ntncnCTGCTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGG NAATGCGGCGNTGGCGGCATCCCGACNACCCTC GGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTCCTCGGCGCNGCGCCGCGGGNGNCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCACCGGCGACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACNGCGAGGGGGAGGNCGGCGAGGAAGTCCGCCGCG AACTGCATCCCCNCCGACATGTGCCGGAAGA                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_7491#0 GCTGTAACATCACGAGGTGTGACAGCCATGACGAGATCATGCTTCCTGATAGTGCTCCTG CTCGCCGTTGCCATGGGTGGTAGCAAGCTCTCGCTCGCCGCCGGCGAGAGCGGCGGTGGC GGCATCCCGACCACCCTCGGCCGCGAGCTCAGGGAGCTCATCTCCAAGGCCAGCGACTTC CTCGGCGCGGCGCCGCGCCGGGCCGGAGCGGACGGGTGGCACGCCGCCGCGGCCACCGGC GACGGCGCCGACGCGATCAGGGCGTCCCTGAGGAGCACGGCGAGGGGGAGGCCGGCGAGG AAGTCCGCCGCGAACTGCATCCCCGCCGACATGTGCCGGAAGAAGAAGGTGCTGTGCGGC AAGAGGTGCTTCAGGTCGAGCTCCAGTAGCAGCCTCAGCCACATCCCGTCCACCAAGTGC GTTGTCAAGTGCAAGAAATGCGTGCCCACCTGCTAGATTTTCCTCCCTTGTACCGAGATT CCATTCCGCGGGTTGCCCCGGGGCCTCACCTCACGATCGATACCCATTCCTGTTCCTCGT CGTGATGTTAACTCTCCACAATTTACTTTCCTATATATATAGATTCAGTTGAATAAGCAG GCAAGTCTCATGCACGAGGTAGATAGGCAGGAGTTATAGAATTTGCTAAGTCGGATATAA TTTTTCGCCCTCGTACTATGTTTCTTCCACGTGAATGATCGATGAACTGCACGAGCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)