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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7497#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1980 fasta sequence
[TTCTCCTCCTCTCTCTCTCTCCGACACGCCCCTTTAACTCGCTCCCGATTCCAAAAAATTCCGCCATAGATTAAAGCGAGAAACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGGGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTAATT-GGGGCAAGTTTAAGCTCGNGAAGAAG-TCGTGAGTGGATCCTTCGGGGAGCTCTATCTCGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAACTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGACCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAAGGAACGGATGTATTGATGTTACTGGCAAGAGACTATTATTTGGGGTGCAGTGTTA-TGAGCTGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAACAGATGTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
[+] EMBL C91756 [TTCTCCTCCTCTCTCTCTCTCCGACACGCCCCTTTAACTCGCTCCCGATTCCAAAAAATTCCGCCATAGATTAAAGCGAGAAACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGNCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGANTTNAGGCGGGAGGCTNGGATCTTGGTCTTGAAGGGAGGTNGGGAGCTCT ]
[+] EMBL C28415 [ ACCCCAAGCAACCACCACCACCACGACCCGGAGTCCTCCCGGATCGATCAGTCCAACCCTGCGAATCAAATCCCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGA GAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGTGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGNGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGNGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTAATT GGGGCAAGTTTAAGCTCGNGAAGAAG TCGTGAGTGGATCCTTCGGG ]
[+] EMBL AK111987 [ CCAAGCCTTCTCGACGCTGGCCTCGATCGATTGGGAGGCCGCGTCTGCGTCCCCTTCTCTTTCCGGAGGAAGCTGGTGGCTTGCTGTGCGGCGGTGGCATCGTCGGTTGGAGGCGCGGGGGAGCACTCGTCGCGTCCCGGGGGAGATCGAATCTAGCGGCGGACGGGCAATGCGGTTGGTTTCCGGGGTGATTTGAGGCGGGAGGCTGGGATCTGGGTCTGGAAGGGAGGTGGGGAGCTCTGTCGGTGGGGTGGGGGGTGGGGGGAGTTGGTGGCGAGTCGACCGCGTGCTCGGGTTTGTGAGTGAGTATGGAGCGCGTTATTGGGGGCAAGTTTAAGCTCGGGAAGAAGATCGGGAGTGGATCCTTCGGGGAGCTCTATCTCGCCGTGAACATACAGAATAGCGAAGAGGTGGCCGTCAAACTGGAGTCTGTGAAATCAAGGCATCCTCAGCTACACTATGAATCAAAACTATATATGCTTTTGCAAGGAGGAACTGGGATTCCACATCTTAAGTGGTTTGGGGTTGAGGGGGAGTACAATGTAATGGTGATCGATCTTCTTGGCCCAAGTCTTGAGGACCTATTTAACTACTGCAACAGAAAGCTCTCTCTTAAATCAGTGCTTATGCTTGCTGATCAGATGATTGCTAGAGTAGAGTACATGCACACGAGAGGATTCCTTCATCGTGATATTAAGCCAGACAATTTCCTTATGGGTTTGGGTCGTAAAGCAAATCAGGTTTATGTCATCGATTATGGGCTTGCGAAAAAGTACCGAGATCTCCAAACACATAAGCACATACCTTATAGGGAAAACAAAAATCTAACTGGAACTGCACGATATGCTAGTGTTAATACACATCTTGGAGTTGAACAAAGCAGGAGAGATGATTTGGAATCTCTCGGTTATGTACTGATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAAGGTCTGAAAGCTGGTACAAAGAAGCAAAAGTATGATAGAATCAGTGAAAAGAAGATGCTGACCCCAGTTGAGGTCCTCTGTAAATCTTATCCATCAGAATTTGTTTCATACTTCCATTATTGCCGATCACTACGGTTTGAAGATAAGCCAGACTATTCCTATTTGAAGAAGCTCTTCCGAGACTTATTTATCCGTGAAGGGTACCAACTTGATTATGTATTTGACTGGACCATGTTGAAGTATCCTCAAATTAGAGATAACAAACTACGACCTAGTGGGAAGACAAGTGGGTTGGTGGGTCGTTCTGCAGAACGGACTGAAAGAACTACAGGTGAAGCTCTTGCTAGAAGAACTGGCTCTGGTTCTGGCCGAAATGGAGAACCCACTAAGCACAGAACTCTACTGGACTCACTGATGTCATCTAAGGCTACCGCTGATACAGATAAAACAAGGCCGACATCACTGTCGCGGAACGGGAGCACGTCAAGACGGGCTGTTGTTTCGTCGAGCAAACCGAATTGTGGAGATCCCAGTGACACCAATCGCACAAGCCGCCTATTCTCAAGTAGCAGCAGCCGGCCATCCGCTGCCCAAAGGGCGCTTCAGTCGGCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGAGCTCACGTGATGATCCCACCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTGACAGGAGGAAATAAGGAACGGATGTATTGATGTTACTGGCAAGAGACTATTATTTGGGGTGCAGTGTTA TGAGCTGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAAC ]
[+] EMBL AU094761 [ TCCCAGTGACNCCAATCGCACAAGCCNCCTATTCTCAAGTNGCAGCAGCCNGCCATCCGCTNCCCAAAGGGCGCTTCAGTCNNCCGGAGCTGAGCTGAGGTCCTCGTCGTTGTCCAAGACGCGTAAGNGCTCACGTGATGATCCCNCCATACGGAGCTTCGAGATGCTCTCACTCAGCGCTNACAGGNGGAAATAAGGNACGGATGTATTGATGTTACTGGCAAGAGACTNTTNTTTGGGGTGCAGTGTTAGTGAG TGCCGCTCCACTATTGGTACGTTGAAATGCAATCATAATGAACAGATGTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAN]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||