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Oryza sativa
cluster # 7517 cluster # 7517       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7517#0 length = 2694 sequences # 1  
consensus_7517#1 length = 1998 sequences # 1  
consensus_7517#2 length = 1313 sequences # 1  
consensus_7517#3 length = 709 sequences # 1  

consensusID : consensus_7517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2694
fasta sequence
                              [GAAAAAATTAGGCACGTGTAATAGGAGGGAGAGAGAGAGAGTATGCAAGCAGCAGCGCAAGCAATACATGCAGGGCAGGCAAGCAACGCAGCACGGGAGTGCGGGAGAGAGCATTGACCAACAAATGAAACATTAAGTTATATATGGTGAAACAAAGAATACAACAACTGAAACATTTAAATATTTTTATGACACATGGTGAAGACACACGTTGAAACATGTCACTGTCACATATGAAACAACAAGTATTGACGGATTGAAACATATGTGTTTCTTTTATTAAAATATAATCATGCGATATCTTGTTGTAGAGATTTAATTACAATGAATACAACGGTGTGATCGGATCATAGATTAAATAAGTAATTTAAAAGAAAATTCATTTTAAAGCTTGCTAAAATACATACATGTTGCATGCATGAGGTGGAGAGAGAGTAGTAGCAGATAGTTTCACGAATTTTGTGAAACACACCGAAGACACATATTGAAACATATCATTATCACGTATGAAATATTTTATTCTAACGGTTTGAAACATATGTTTTTTTTTGACATAATATAATCATGTGATATCTTATTGTAAAGATTTAATTGCAACGAATACAACGGTGTGATCGGATCGTAGATCGGATAAGTAATTTAAGAGGAAAAATATTTAAAAAGAGGATGAAAGAATGAAAAGAAGCAGCTAGGCACATACATTACAGTGACATGGTTCGTTCCCACATGCGCTCGTTTAGACGTCCGATTTTTGGTGTGATGCCGGACGTCCGAGCCGTAGCGCTCTTCCGCTGATAGCGGGGTATGCCAAAATAGGATGCTCCGGGAAGGCACTGGAAGCATTTCACTCGATGCTGGATGACAGGATCAAGCCGGACGAGTTCACCATGGCAGGGGTGCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCAAGAAAGGTACATAGTTTCATCATCCAGCACCGTATCCGGAAGAACCACTTCGTTCTGAATGGCCTGGTTGACATGTTCGCCAAGTGCGATGACCTCGCTTTCGCACGAAAGATCTTCGACAACATGCAATGGAGGAATACCGAATGCTGGAACTTGATGATCTCTGCACTTTCCACCCATGGATAGAGCATAGAGGCTATTAAATTGTTCTCCAAGATGGAGTGTTCGGACCAGAAGCCTAATGCGATCACACTTCTCGCTGTGCTTGGAGCTTGCACGCATGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAACAAGTTCGATGTTTACGGGGTTGCTGCTGCAGTGGAGCATTCTGGTTGCCTGGTTGACCTCCTGGCCTGTGCTGGAAGATTGAGAGAAGCTTATGAGATTGTCAAGAACATGCTTGTTCAACCAAACGAGGTGATCTGGTGCTCCTTACTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATTCACCAATTGCACTCCTGTCGTGTGTCAACCAACGATGCAGAGTACATACTGCTGTCAAATATCATGGCCTCATCGGAGAGATGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACTCCAGGGTGCAGTTCAGTTGAGCTCGATGTTCCCGAACAACAAGTACGCGCAGGCAGTGAAAACATTTTCGCCAAATTTCCTAGATCAAAGGCGCCATAAAGGAGTTGGGAAGACTCCAGCAGGGTGCAGTTCAGTTGATCTTGACATTCCTGAACACCAAGTACACCCAGGCAGTGGTGCATGTGGCGCCCCGCTGGGGCCTGAACACGCATGCCGCCAAGATCCCCTTTCTCGGAGACACCCCGGGCTTGTGAGCCCATGAGCAATGGGAGGCGCCGCCGCGCACCTCCGTCCTGGAAGGAGCGGACCGCGGACGCGCTCGCACCGCTGTCGGACTGGCTCGAGCCTACCTCCCCCGAACCACCGCGCCCACTTCCTTCCGCAACTGCAGTCGCCCGCGGTGCGTTTGCGTAGCCGCCGACAACCTTCGCTTGAGTAGAGGACATGGCATCCACCGTCCTCTCGTTCACGGAGTTTTCTCTTCGGGCGCGCGACCACCCCACGCACCAATGAGAGGTTCTACTACATTGGGGATCTGAAGCCCCAGGCTCAGCAGTTCATCTTACTGAACTTCTTTTTTAATAAAAAGGAATCATTGTGTATGCAGTGAGAGGACACCAGCTGCTGATTTGAGGTGCTGCTCACAGTCACTGGTTTCGAACATTGGGTAGAGTTCCCAAAAGAGTGGATGAGGTGAGCACTCAACAGGAACCATCAGGCAACAACCATCCTTCAGCTATATAATACAGTAATTGCAAAGTCATGGCAGGCTTTCTTATGATACATCACCCTAAAATCAGAAAAAAGGTGATGGCCACTTTTACTAGCTTAGTGGGTCAAAAGTCAAAACAAGCTGAAGCTCCACCTCCACTGTATCCTAGTATGTTCATCAATACGGGCCAAAAAAATTATGCTTGTCTTGTGCCAAAAGTACTGGGATGTGCCCATCGAGGCTTTGCAAGTGTTTACGAGCTGTTCGAATTACTGTTAGGTGGGGTTTATTGGTAACCGGTATCTATGTAAAAGGTGCATTTAACAGTCCTGGTGGCTGATGTTATTTTAAGAACAAGAAACCTGACGTTTCAAGATGAAT]

[+] EMBL AK119432             [GAAAAAATTAGGCACGTGTAATAGGAGGGAGAGAGAGAGAGTATGCAAGCAGCAGCGCAAGCAATACATGCAGGGCAGGCAAGCAACGCAGCACGGGAGTGCGGGAGAGAGCATTGACCAACAAATGAAACATTAAGTTATATATGGTGAAACAAAGAATACAACAACTGAAACATTTAAATATTTTTATGACACATGGTGAAGACACACGTTGAAACATGTCACTGTCACATATGAAACAACAAGTATTGACGGATTGAAACATATGTGTTTCTTTTATTAAAATATAATCATGCGATATCTTGTTGTAGAGATTTAATTACAATGAATACAACGGTGTGATCGGATCATAGATTAAATAAGTAATTTAAAAGAAAATTCATTTTAAAGCTTGCTAAAATACATACATGTTGCATGCATGAGGTGGAGAGAGAGTAGTAGCAGATAGTTTCACGAATTTTGTGAAACACACCGAAGACACATATTGAAACATATCATTATCACGTATGAAATATTTTATTCTAACGGTTTGAAACATATGTTTTTTTTTGACATAATATAATCATGTGATATCTTATTGTAAAGATTTAATTGCAACGAATACAACGGTGTGATCGGATCGTAGATCGGATAAGTAATTTAAGAGGAAAAATATTTAAAAAGAGGATGAAAGAATGAAAAGAAGCAGCTAGGCACATACATTACAGTGACATGGTTCGTTCCCACATGCGCTCGTTTAGACGTCCGATTTTTGGTGTGATGCCGGACGTCCGAGCCGTAGCGCTCTTCCGCTGATAGCGGGGTATGCCAAAATAGGATGCTCCGGGAAGGCACTGGAAGCATTTCACTCGATGCTGGATGACAGGATCAAGCCGGACGAGTTCACCATGGCAGGGGTGCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCAAGAAAGGTACATAGTTTCATCATCCAGCACCGTATCCGGAAGAACCACTTCGTTCTGAATGGCCTGGTTGACATGTTCGCCAAGTGCGATGACCTCGCTTTCGCACGAAAGATCTTCGACAACATGCAATGGAGGAATACCGAATGCTGGAACTTGATGATCTCTGCACTTTCCACCCATGGATAGAGCATAGAGGCTATTAAATTGTTCTCCAAGATGGAGTGTTCGGACCAGAAGCCTAATGCGATCACACTTCTCGCTGTGCTTGGAGCTTGCACGCATGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAACAAGTTCGATGTTTACGGGGTTGCTGCTGCAGTGGAGCATTCTGGTTGCCTGGTTGACCTCCTGGCCTGTGCTGGAAGATTGAGAGAAGCTTATGAGATTGTCAAGAACATGCTTGTTCAACCAAACGAGGTGATCTGGTGCTCCTTACTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATTCACCAATTGCACTCCTGTCGTGTGTCAACCAACGATGCAGAGTACATACTGCTGTCAAATATCATGGCCTCATCGGAGAGATGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACTCCAGGGTGCAGTTCAGTTGAGCTCGATGTTCCCGAACAACAAGTACGCGCAGGCAGTGAAAACATTTTCGCCAAATTTCCTAGATCAAAGGCGCCATAAAGGAGTTGGGAAGACTCCAGCAGGGTGCAGTTCAGTTGATCTTGACATTCCTGAACACCAAGTACACCCAGGCAGTGGTGCATGTGGCGCCCCGCTGGGGCCTGAACACGCATGCCGCCAAGATCCCCTTTCTCGGAGACACCCCGGGCTTGTGAGCCCATGAGCAATGGGAGGCGCCGCCGCGCACCTCCGTCCTGGAAGGAGCGGACCGCGGACGCGCTCGCACCGCTGTCGGACTGGCTCGAGCCTACCTCCCCCGAACCACCGCGCCCACTTCCTTCCGCAACTGCAGTCGCCCGCGGTGCGTTTGCGTAGCCGCCGACAACCTTCGCTTGAGTAGAGGACATGGCATCCACCGTCCTCTCGTTCACGGAGTTTTCTCTTCGGGCGCGCGACCACCCCACGCACCAATGAGAGGTTCTACTACATTGGGGATCTGAAGCCCCAGGCTCAGCAGTTCATCTTACTGAACTTCTTTTTTAATAAAAAGGAATCATTGTGTATGCAGTGAGAGGACACCAGCTGCTGATTTGAGGTGCTGCTCACAGTCACTGGTTTCGAACATTGGGTAGAGTTCCCAAAAGAGTGGATGAGGTGAGCACTCAACAGGAACCATCAGGCAACAACCATCCTTCAGCTATATAATACAGTAATTGCAAAGTCATGGCAGGCTTTCTTATGATACATCACCCTAAAATCAGAAAAAAGGTGATGGCCACTTTTACTAGCTTAGTGGGTCAAAAGTCAAAACAAGCTGAAGCTCCACCTCCACTGTATCCTAGTATGTTCATCAATACGGGCCAAAAAAATTATGCTTGTCTTGTGCCAAAAGTACTGGGATGTGCCCATCGAGGCTTTGCAAGTGTTTACGAGCTGTTCGAATTACTGTTAGGTGGGGTTTATTGGTAACCGGTATCTATGTAAAAGGTGCATTTAACAGTCCTGGTGGCTGATGTTATTTTAAGAACAAGAAACCTGACGTTTCAAGATGAAT]


>consensus_7517#0 GAAAAAATTAGGCACGTGTAATAGGAGGGAGAGAGAGAGAGTATGCAAGCAGCAGCGCAA GCAATACATGCAGGGCAGGCAAGCAACGCAGCACGGGAGTGCGGGAGAGAGCATTGACCA ACAAATGAAACATTAAGTTATATATGGTGAAACAAAGAATACAACAACTGAAACATTTAA ATATTTTTATGACACATGGTGAAGACACACGTTGAAACATGTCACTGTCACATATGAAAC AACAAGTATTGACGGATTGAAACATATGTGTTTCTTTTATTAAAATATAATCATGCGATA TCTTGTTGTAGAGATTTAATTACAATGAATACAACGGTGTGATCGGATCATAGATTAAAT AAGTAATTTAAAAGAAAATTCATTTTAAAGCTTGCTAAAATACATACATGTTGCATGCAT GAGGTGGAGAGAGAGTAGTAGCAGATAGTTTCACGAATTTTGTGAAACACACCGAAGACA CATATTGAAACATATCATTATCACGTATGAAATATTTTATTCTAACGGTTTGAAACATAT GTTTTTTTTTGACATAATATAATCATGTGATATCTTATTGTAAAGATTTAATTGCAACGA ATACAACGGTGTGATCGGATCGTAGATCGGATAAGTAATTTAAGAGGAAAAATATTTAAA AAGAGGATGAAAGAATGAAAAGAAGCAGCTAGGCACATACATTACAGTGACATGGTTCGT TCCCACATGCGCTCGTTTAGACGTCCGATTTTTGGTGTGATGCCGGACGTCCGAGCCGTA GCGCTCTTCCGCTGATAGCGGGGTATGCCAAAATAGGATGCTCCGGGAAGGCACTGGAAG CATTTCACTCGATGCTGGATGACAGGATCAAGCCGGACGAGTTCACCATGGCAGGGGTGC TCTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCAAGAAAGGTACATAGTTTCATCA TCCAGCACCGTATCCGGAAGAACCACTTCGTTCTGAATGGCCTGGTTGACATGTTCGCCA AGTGCGATGACCTCGCTTTCGCACGAAAGATCTTCGACAACATGCAATGGAGGAATACCG AATGCTGGAACTTGATGATCTCTGCACTTTCCACCCATGGATAGAGCATAGAGGCTATTA AATTGTTCTCCAAGATGGAGTGTTCGGACCAGAAGCCTAATGCGATCACACTTCTCGCTG TGCTTGGAGCTTGCACGCATGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAACAAGT TCGATGTTTACGGGGTTGCTGCTGCAGTGGAGCATTCTGGTTGCCTGGTTGACCTCCTGG CCTGTGCTGGAAGATTGAGAGAAGCTTATGAGATTGTCAAGAACATGCTTGTTCAACCAA ACGAGGTGATCTGGTGCTCCTTACTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGT CTGAACTCGTATCAAGTGAGATTCACCAATTGCACTCCTGTCGTGTGTCAACCAACGATG CAGAGTACATACTGCTGTCAAATATCATGGCCTCATCGGAGAGATGGGAGCAGGCTGAAC GCATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACTCCAGGGTGCAGTTCAGTTG AGCTCGATGTTCCCGAACAACAAGTACGCGCAGGCAGTGAAAACATTTTCGCCAAATTTC CTAGATCAAAGGCGCCATAAAGGAGTTGGGAAGACTCCAGCAGGGTGCAGTTCAGTTGAT CTTGACATTCCTGAACACCAAGTACACCCAGGCAGTGGTGCATGTGGCGCCCCGCTGGGG CCTGAACACGCATGCCGCCAAGATCCCCTTTCTCGGAGACACCCCGGGCTTGTGAGCCCA TGAGCAATGGGAGGCGCCGCCGCGCACCTCCGTCCTGGAAGGAGCGGACCGCGGACGCGC TCGCACCGCTGTCGGACTGGCTCGAGCCTACCTCCCCCGAACCACCGCGCCCACTTCCTT CCGCAACTGCAGTCGCCCGCGGTGCGTTTGCGTAGCCGCCGACAACCTTCGCTTGAGTAG AGGACATGGCATCCACCGTCCTCTCGTTCACGGAGTTTTCTCTTCGGGCGCGCGACCACC CCACGCACCAATGAGAGGTTCTACTACATTGGGGATCTGAAGCCCCAGGCTCAGCAGTTC ATCTTACTGAACTTCTTTTTTAATAAAAAGGAATCATTGTGTATGCAGTGAGAGGACACC AGCTGCTGATTTGAGGTGCTGCTCACAGTCACTGGTTTCGAACATTGGGTAGAGTTCCCA AAAGAGTGGATGAGGTGAGCACTCAACAGGAACCATCAGGCAACAACCATCCTTCAGCTA TATAATACAGTAATTGCAAAGTCATGGCAGGCTTTCTTATGATACATCACCCTAAAATCA GAAAAAAGGTGATGGCCACTTTTACTAGCTTAGTGGGTCAAAAGTCAAAACAAGCTGAAG CTCCACCTCCACTGTATCCTAGTATGTTCATCAATACGGGCCAAAAAAATTATGCTTGTC TTGTGCCAAAAGTACTGGGATGTGCCCATCGAGGCTTTGCAAGTGTTTACGAGCTGTTCG AATTACTGTTAGGTGGGGTTTATTGGTAACCGGTATCTATGTAAAAGGTGCATTTAACAG TCCTGGTGGCTGATGTTATTTTAAGAACAAGAAACCTGACGTTTCAAGATGAAT



consensusID : consensus_7517#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1998
fasta sequence
                              [AATAGCAGAAATATTTTTGTTTGACACCCCGACGTTATATAAGCCCGCGAGCCGCCGCCGCCGCCGCCGCTGCTAGGGCGGACGAGCGCTCGCCATGGCGGCTAGCCGAGCGAGGCAACTCCACGCTCTCTACCTGACGAGAGGATGCCGTGACCCAGACATGTGGGCCAACCTCGCCAAGGTCTACGCCTCCAACTCCTTCCTCCGGGAGGCCGCTATCATCTACTCGAAACTACTGCCCCATCGTACTCACCACCTGCCCCTTGTCATCGTCCTCCTCAAGGCAACCGCCTCCCGCGCGGATCCCGTCCTCGGCAGGGCCCTCCACGCGGAGGCCGTGAAATCCGCCAACGCCCACGACCGCCTCGTGGGGACGACGCTGGTGTCCGTGTACTGCAAGTGCGGCCTCCTGGCCGACGCGCGCAGGGTGTTCGACGGAATGCTGGACCGGAACGCCGTGACGTGCAACGCCATGCTCGCCGGGTACGCGGCGGCGGGAGACATGGTGAGCGCGGAGGCGCTGTTCGCCGGCATGGGCTCACGGACTCCCGTCACGTGGGCAACGCTGATCCGGGGGTTCGCGGGGAAGGGCGACATGGCGGAAACGCGGCGGTGGTTTGAGGCCATGCCGCTGGGCATGCAGAACGTCGTCACGTGGACCGTGGCCGTGCAGGCCTACGTTGCCGCGGGGGACATGGAGACCGCGAGGGAGCTGTTCAACAAGATGCCTGCGCGGAACGCGTTTGTGTGGTCGTCGATGGTCACCGGGAACTTCAAGGCTGGCAATGCCGACGAAGCGCAAGCGGTGTTCGACAAAATCCCCGTGCGCAACTTGGTGAACTGGAACGCACTAATAGCAGGGTATGCCAAAATGGGATGCTGCGAGAAGGCACTGGAAGCATTTCACTCCATGCTAAAGGACAAGATCAAGCCGGACGAGTTCACCATGGCAGGTGTTCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCGAGAAAGGTTCACAATTTCATCATCCAGCACCGTATCCGGAAGAACCAGTTCGTTATGAATGGCCTGGTTGACATGTTCGCCAAGTGCGGTGACCTCGCTTTCGCACGAAATATCTTCGACAACATGCAATGGAGGAACACCGAATGCTGGAACTCGATGATCTCTGCACTTTCCAGCCATGGACAGAGCATTGAGGCTATTCGGTTGTTCTCCAAGATGGAGTGTTCGGAGCAGAAGCCTAATGAGATCACACTTCTTGCCGTACTCGGAGCTTGCACACACGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAGCAAATTCGATATTTACGGGGTTGCTGCTGCAGTAGAGCATTACGGCTGCCTGGTTGATCTCTTGGGCCGTTCTGGAAGATTGAGGGAAGCTTATGAGATTGTCAAGAACATGCTTGTTGAACCCAATGAGGTGATCTGGGGCTCCCTGCTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATCCACCAATTGCACTCCCGTCGTGTGTCAACCAACGATGCAGAGTACATCTTGCTGTCAAATATCATGGCCTCGTCGGAGAGGTGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACCCCAGGGTGCAGTTCAGTGGAGCTCGAGATTACTGAACACCAAGTATGTGCAGGCAGTGGTACGTTATCCCAGCTACACTGACTGCATTTTTTGCATGTCCCAAATGTTCTTCCGAAAGTGTTTTCACAAGTTGCCCAGAAAAGAAAAGCCCCTCATGTGCTGGATATTCTATTAACTGTACTTCTTATACATAGATGATTAGACAAGGACATTAGATTATTAGACAAGGGAATTATCTGTTCTGTTGCATCCCTTTATCAACTGGTGCTGGCATAGAAATAACTACACACTTCGTGTCAATTTTATATGCTAATATCAGTCAACAGGCACAATTGAAT]

[+] EMBL AK069671             [AATAGCAGAAATATTTTTGTTTGACACCCCGACGTTATATAAGCCCGCGAGCCGCCGCCGCCGCCGCCGCTGCTAGGGCGGACGAGCGCTCGCCATGGCGGCTAGCCGAGCGAGGCAACTCCACGCTCTCTACCTGACGAGAGGATGCCGTGACCCAGACATGTGGGCCAACCTCGCCAAGGTCTACGCCTCCAACTCCTTCCTCCGGGAGGCCGCTATCATCTACTCGAAACTACTGCCCCATCGTACTCACCACCTGCCCCTTGTCATCGTCCTCCTCAAGGCAACCGCCTCCCGCGCGGATCCCGTCCTCGGCAGGGCCCTCCACGCGGAGGCCGTGAAATCCGCCAACGCCCACGACCGCCTCGTGGGGACGACGCTGGTGTCCGTGTACTGCAAGTGCGGCCTCCTGGCCGACGCGCGCAGGGTGTTCGACGGAATGCTGGACCGGAACGCCGTGACGTGCAACGCCATGCTCGCCGGGTACGCGGCGGCGGGAGACATGGTGAGCGCGGAGGCGCTGTTCGCCGGCATGGGCTCACGGACTCCCGTCACGTGGGCAACGCTGATCCGGGGGTTCGCGGGGAAGGGCGACATGGCGGAAACGCGGCGGTGGTTTGAGGCCATGCCGCTGGGCATGCAGAACGTCGTCACGTGGACCGTGGCCGTGCAGGCCTACGTTGCCGCGGGGGACATGGAGACCGCGAGGGAGCTGTTCAACAAGATGCCTGCGCGGAACGCGTTTGTGTGGTCGTCGATGGTCACCGGGAACTTCAAGGCTGGCAATGCCGACGAAGCGCAAGCGGTGTTCGACAAAATCCCCGTGCGCAACTTGGTGAACTGGAACGCACTAATAGCAGGGTATGCCAAAATGGGATGCTGCGAGAAGGCACTGGAAGCATTTCACTCCATGCTAAAGGACAAGATCAAGCCGGACGAGTTCACCATGGCAGGTGTTCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCGAGAAAGGTTCACAATTTCATCATCCAGCACCGTATCCGGAAGAACCAGTTCGTTATGAATGGCCTGGTTGACATGTTCGCCAAGTGCGGTGACCTCGCTTTCGCACGAAATATCTTCGACAACATGCAATGGAGGAACACCGAATGCTGGAACTCGATGATCTCTGCACTTTCCAGCCATGGACAGAGCATTGAGGCTATTCGGTTGTTCTCCAAGATGGAGTGTTCGGAGCAGAAGCCTAATGAGATCACACTTCTTGCCGTACTCGGAGCTTGCACACACGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAGCAAATTCGATATTTACGGGGTTGCTGCTGCAGTAGAGCATTACGGCTGCCTGGTTGATCTCTTGGGCCGTTCTGGAAGATTGAGGGAAGCTTATGAGATTGTCAAGAACATGCTTGTTGAACCCAATGAGGTGATCTGGGGCTCCCTGCTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATCCACCAATTGCACTCCCGTCGTGTGTCAACCAACGATGCAGAGTACATCTTGCTGTCAAATATCATGGCCTCGTCGGAGAGGTGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACCCCAGGGTGCAGTTCAGTGGAGCTCGAGATTACTGAACACCAAGTATGTGCAGGCAGTGGTACGTTATCCCAGCTACACTGACTGCATTTTTTGCATGTCCCAAATGTTCTTCCGAAAGTGTTTTCACAAGTTGCCCAGAAAAGAAAAGCCCCTCATGTGCTGGATATTCTATTAACTGTACTTCTTATACATAGATGATTAGACAAGGACATTAGATTATTAGACAAGGGAATTATCTGTTCTGTTGCATCCCTTTATCAACTGGTGCTGGCATAGAAATAACTACACACTTCGTGTCAATTTTATATGCTAATATCAGTCAACAGGCACAATTGAAT]


>consensus_7517#1 AATAGCAGAAATATTTTTGTTTGACACCCCGACGTTATATAAGCCCGCGAGCCGCCGCCG CCGCCGCCGCTGCTAGGGCGGACGAGCGCTCGCCATGGCGGCTAGCCGAGCGAGGCAACT CCACGCTCTCTACCTGACGAGAGGATGCCGTGACCCAGACATGTGGGCCAACCTCGCCAA GGTCTACGCCTCCAACTCCTTCCTCCGGGAGGCCGCTATCATCTACTCGAAACTACTGCC CCATCGTACTCACCACCTGCCCCTTGTCATCGTCCTCCTCAAGGCAACCGCCTCCCGCGC GGATCCCGTCCTCGGCAGGGCCCTCCACGCGGAGGCCGTGAAATCCGCCAACGCCCACGA CCGCCTCGTGGGGACGACGCTGGTGTCCGTGTACTGCAAGTGCGGCCTCCTGGCCGACGC GCGCAGGGTGTTCGACGGAATGCTGGACCGGAACGCCGTGACGTGCAACGCCATGCTCGC CGGGTACGCGGCGGCGGGAGACATGGTGAGCGCGGAGGCGCTGTTCGCCGGCATGGGCTC ACGGACTCCCGTCACGTGGGCAACGCTGATCCGGGGGTTCGCGGGGAAGGGCGACATGGC GGAAACGCGGCGGTGGTTTGAGGCCATGCCGCTGGGCATGCAGAACGTCGTCACGTGGAC CGTGGCCGTGCAGGCCTACGTTGCCGCGGGGGACATGGAGACCGCGAGGGAGCTGTTCAA CAAGATGCCTGCGCGGAACGCGTTTGTGTGGTCGTCGATGGTCACCGGGAACTTCAAGGC TGGCAATGCCGACGAAGCGCAAGCGGTGTTCGACAAAATCCCCGTGCGCAACTTGGTGAA CTGGAACGCACTAATAGCAGGGTATGCCAAAATGGGATGCTGCGAGAAGGCACTGGAAGC ATTTCACTCCATGCTAAAGGACAAGATCAAGCCGGACGAGTTCACCATGGCAGGTGTTCT CTCTGCCTGCGCACAGCTCGGTTCGCTAGAGCAAGCGAGAAAGGTTCACAATTTCATCAT CCAGCACCGTATCCGGAAGAACCAGTTCGTTATGAATGGCCTGGTTGACATGTTCGCCAA GTGCGGTGACCTCGCTTTCGCACGAAATATCTTCGACAACATGCAATGGAGGAACACCGA ATGCTGGAACTCGATGATCTCTGCACTTTCCAGCCATGGACAGAGCATTGAGGCTATTCG GTTGTTCTCCAAGATGGAGTGTTCGGAGCAGAAGCCTAATGAGATCACACTTCTTGCCGT ACTCGGAGCTTGCACACACGGAGGATTTGTAGATGAAGGACTAAGAATCTTCAGCAAATT CGATATTTACGGGGTTGCTGCTGCAGTAGAGCATTACGGCTGCCTGGTTGATCTCTTGGG CCGTTCTGGAAGATTGAGGGAAGCTTATGAGATTGTCAAGAACATGCTTGTTGAACCCAA TGAGGTGATCTGGGGCTCCCTGCTCGGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTC TGAACTCGTATCAAGTGAGATCCACCAATTGCACTCCCGTCGTGTGTCAACCAACGATGC AGAGTACATCTTGCTGTCAAATATCATGGCCTCGTCGGAGAGGTGGGAGCAGGCTGAACG CATGAGGAGAAAGATGGCGCTCCATGGAGTTGGGAAGACCCCAGGGTGCAGTTCAGTGGA GCTCGAGATTACTGAACACCAAGTATGTGCAGGCAGTGGTACGTTATCCCAGCTACACTG ACTGCATTTTTTGCATGTCCCAAATGTTCTTCCGAAAGTGTTTTCACAAGTTGCCCAGAA AAGAAAAGCCCCTCATGTGCTGGATATTCTATTAACTGTACTTCTTATACATAGATGATT AGACAAGGACATTAGATTATTAGACAAGGGAATTATCTGTTCTGTTGCATCCCTTTATCA ACTGGTGCTGGCATAGAAATAACTACACACTTCGTGTCAATTTTATATGCTAATATCAGT CAACAGGCACAATTGAAT



consensusID : consensus_7517#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1313
fasta sequence
                              [TGAGGAAAAATTAGGCACGTGTATTAGGAGGGAGAGGGAGAGAGAGTATGCAAGCAGCAGCGCAAGCAACACATGCAGTGCAGGCAAGCAACGCGGCACGGGAGCAACGTGGGCGAGCGGCAGTGCGGGGGCGAGCGTTGACCAATAAGTGAAACATTAAGTTATATATGGTGAAAAAAAATCAGCAATTGAAACATTTAAGTATTTTATGAAACATGGTGAAGATACACGTTGAAACATGTCGCTGTCACATATAAAACAACAAGTATTAACGGATTAAAACATATATTTTTCTTTTATCAAAATATAATCATGCGATATCTTGTTGTAAAGATTTAATTACAACGAATACAATGGTGTGGTCGGATCATTGATCGAATAAGTAATTTAAAAGAAAAATCATTTTGAAGCTTGCTAAAATACATGCATGTATGCATGCATGAGGTGGAGAGAGAGTAGTAGCAGGTAGTTTCAGGATTTTTGTGAAACACACCGAAGACACATATTGAAACATATCACTATCACGTATGAAACATTTTATTCTAACGGTTTGAAACACATGTTTTTCTTTTGACGTAATATAATCATGTGGTATCTTATTGTAAAGATTTAATTTCAACGAATACAACGGTGTTATCGGATCGTAGATCGGATAAGTAATTTAAGAGAAAAAAATATCTAAAGAGAGGAGGAAAGAATGAAAAGAAACAGCTAGGCACATACGTTACAGTGACAGGGTTCGTTCTCACATGCGCTCGTTGCCTGGCTAGACGTTCGATTTTTGGTGTGATGCCGGACGTCCGAGCCGTAGAGCTCTCCCAATATTCCTTCTCTCCCTTCATATTCCCCCCATATATATATAACCACCTTTTTGATAAATTTCAAACTATTTTTTCTCTTAACTTACTTCTATAATCTAAGATCCGTTTGGTCCATTAAATTTGTTGTAATTAAATCTTTGAAACAAGACCACACATGGTTATATTTTGATAAAAAAATATTTAGTTTTTCTTAATGTATTATTTTAAGTGTTGCATATGGTTTTATTTGGATGTTTCAGCAAGTATTTTATGGTGTTTCAATAGTTAGAATCTAATGTTTTCATACATGATGTAAAAATGTTTCACTATATTATCAAGTGTTACAAATATATTGTATGTTTTAGATATTATTTTTCCGATTGTTTCATTGTTGGGACTCAATGTTTTACTGTTTTATATAGTGGCTAAATGTTTCATATAGTAGTTATTGGTCTTGCAGTCAATATTTGAAATGCTGCATCTCTCTAAAATATTTTGTAAAGTGAAATAAAA]

[+] EMBL AK110754             [TGAGGAAAAATTAGGCACGTGTATTAGGAGGGAGAGGGAGAGAGAGTATGCAAGCAGCAGCGCAAGCAACACATGCAGTGCAGGCAAGCAACGCGGCACGGGAGCAACGTGGGCGAGCGGCAGTGCGGGGGCGAGCGTTGACCAATAAGTGAAACATTAAGTTATATATGGTGAAAAAAAATCAGCAATTGAAACATTTAAGTATTTTATGAAACATGGTGAAGATACACGTTGAAACATGTCGCTGTCACATATAAAACAACAAGTATTAACGGATTAAAACATATATTTTTCTTTTATCAAAATATAATCATGCGATATCTTGTTGTAAAGATTTAATTACAACGAATACAATGGTGTGGTCGGATCATTGATCGAATAAGTAATTTAAAAGAAAAATCATTTTGAAGCTTGCTAAAATACATGCATGTATGCATGCATGAGGTGGAGAGAGAGTAGTAGCAGGTAGTTTCAGGATTTTTGTGAAACACACCGAAGACACATATTGAAACATATCACTATCACGTATGAAACATTTTATTCTAACGGTTTGAAACACATGTTTTTCTTTTGACGTAATATAATCATGTGGTATCTTATTGTAAAGATTTAATTTCAACGAATACAACGGTGTTATCGGATCGTAGATCGGATAAGTAATTTAAGAGAAAAAAATATCTAAAGAGAGGAGGAAAGAATGAAAAGAAACAGCTAGGCACATACGTTACAGTGACAGGGTTCGTTCTCACATGCGCTCGTTGCCTGGCTAGACGTTCGATTTTTGGTGTGATGCCGGACGTCCGAGCCGTAGAGCTCTCCCAATATTCCTTCTCTCCCTTCATATTCCCCCCATATATATATAACCACCTTTTTGATAAATTTCAAACTATTTTTTCTCTTAACTTACTTCTATAATCTAAGATCCGTTTGGTCCATTAAATTTGTTGTAATTAAATCTTTGAAACAAGACCACACATGGTTATATTTTGATAAAAAAATATTTAGTTTTTCTTAATGTATTATTTTAAGTGTTGCATATGGTTTTATTTGGATGTTTCAGCAAGTATTTTATGGTGTTTCAATAGTTAGAATCTAATGTTTTCATACATGATGTAAAAATGTTTCACTATATTATCAAGTGTTACAAATATATTGTATGTTTTAGATATTATTTTTCCGATTGTTTCATTGTTGGGACTCAATGTTTTACTGTTTTATATAGTGGCTAAATGTTTCATATAGTAGTTATTGGTCTTGCAGTCAATATTTGAAATGCTGCATCTCTCTAAAATATTTTGTAAAGTGAAATAAAA]


>consensus_7517#2 TGAGGAAAAATTAGGCACGTGTATTAGGAGGGAGAGGGAGAGAGAGTATGCAAGCAGCAG CGCAAGCAACACATGCAGTGCAGGCAAGCAACGCGGCACGGGAGCAACGTGGGCGAGCGG CAGTGCGGGGGCGAGCGTTGACCAATAAGTGAAACATTAAGTTATATATGGTGAAAAAAA ATCAGCAATTGAAACATTTAAGTATTTTATGAAACATGGTGAAGATACACGTTGAAACAT GTCGCTGTCACATATAAAACAACAAGTATTAACGGATTAAAACATATATTTTTCTTTTAT CAAAATATAATCATGCGATATCTTGTTGTAAAGATTTAATTACAACGAATACAATGGTGT GGTCGGATCATTGATCGAATAAGTAATTTAAAAGAAAAATCATTTTGAAGCTTGCTAAAA TACATGCATGTATGCATGCATGAGGTGGAGAGAGAGTAGTAGCAGGTAGTTTCAGGATTT TTGTGAAACACACCGAAGACACATATTGAAACATATCACTATCACGTATGAAACATTTTA TTCTAACGGTTTGAAACACATGTTTTTCTTTTGACGTAATATAATCATGTGGTATCTTAT TGTAAAGATTTAATTTCAACGAATACAACGGTGTTATCGGATCGTAGATCGGATAAGTAA TTTAAGAGAAAAAAATATCTAAAGAGAGGAGGAAAGAATGAAAAGAAACAGCTAGGCACA TACGTTACAGTGACAGGGTTCGTTCTCACATGCGCTCGTTGCCTGGCTAGACGTTCGATT TTTGGTGTGATGCCGGACGTCCGAGCCGTAGAGCTCTCCCAATATTCCTTCTCTCCCTTC ATATTCCCCCCATATATATATAACCACCTTTTTGATAAATTTCAAACTATTTTTTCTCTT AACTTACTTCTATAATCTAAGATCCGTTTGGTCCATTAAATTTGTTGTAATTAAATCTTT GAAACAAGACCACACATGGTTATATTTTGATAAAAAAATATTTAGTTTTTCTTAATGTAT TATTTTAAGTGTTGCATATGGTTTTATTTGGATGTTTCAGCAAGTATTTTATGGTGTTTC AATAGTTAGAATCTAATGTTTTCATACATGATGTAAAAATGTTTCACTATATTATCAAGT GTTACAAATATATTGTATGTTTTAGATATTATTTTTCCGATTGTTTCATTGTTGGGACTC AATGTTTTACTGTTTTATATAGTGGCTAAATGTTTCATATAGTAGTTATTGGTCTTGCAG TCAATATTTGAAATGCTGCATCTCTCTAAAATATTTTGTAAAGTGAAATAAAA



consensusID : consensus_7517#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 709
fasta sequence
                              [CGGTCGGCAGGGCGCTCCACGCGGAGGCTGTGAAATCCGCCAACGCCCATGACCGCCTCGTGGGCACCACGCTGGTGTCCGGTGTACTGCAAGTGCGGCCTCCTGGCCAACGCACGCGGGGTATTGGACAGAATGCCGGACCGGAACACCGTGACGTGTAATGCCATGCTCACCGGGTATACGGCGGCGGGCGACATGGCCAACGCTGAGGCGGTGTTTGCCGGCATGGGCTCACGGACGCCCGTCACGTGGGCGACGCTGATCCGGGGGTTCGCGGAGGAGCGCGACATGGTGGATGCGCGGCGGTGGTTCGAGGCCGCGCCGCCGGGCATGCGGAACGTCGTCACGTGGACCGTGGCTGTGCAGGGTTACATGGCCACGGGGGACATGGAGACCGCGAGGGAGCTGTTCGACAAGATGCCTACGTGGAACGCGTTCGTGTGGTCATCGATGGTCACTGGGTACTTCAAGGCTGGCAATGCCAACGAAGCGCACGCGGTGTTCAACAGAATACCCGTGCGAAACTTGGTGAATTGGAACACGCTGATAGCGGAAATGCTTACCATCGGCAGTCCGGCCAGAAATAAAAAATCGGACGTCTTAATCTAAAAGAACAACAGTGTAGGTGCATGGTGCAACGGTTGGTCAGGTGTACTGACAAGCAACGGAGCATGTATACAAACATGTTTCAAAATTTAAATGATTTTTA]

[+] EMBL AK106953             [CGGTCGGCAGGGCGCTCCACGCGGAGGCTGTGAAATCCGCCAACGCCCATGACCGCCTCGTGGGCACCACGCTGGTGTCCGGTGTACTGCAAGTGCGGCCTCCTGGCCAACGCACGCGGGGTATTGGACAGAATGCCGGACCGGAACACCGTGACGTGTAATGCCATGCTCACCGGGTATACGGCGGCGGGCGACATGGCCAACGCTGAGGCGGTGTTTGCCGGCATGGGCTCACGGACGCCCGTCACGTGGGCGACGCTGATCCGGGGGTTCGCGGAGGAGCGCGACATGGTGGATGCGCGGCGGTGGTTCGAGGCCGCGCCGCCGGGCATGCGGAACGTCGTCACGTGGACCGTGGCTGTGCAGGGTTACATGGCCACGGGGGACATGGAGACCGCGAGGGAGCTGTTCGACAAGATGCCTACGTGGAACGCGTTCGTGTGGTCATCGATGGTCACTGGGTACTTCAAGGCTGGCAATGCCAACGAAGCGCACGCGGTGTTCAACAGAATACCCGTGCGAAACTTGGTGAATTGGAACACGCTGATAGCGGAAATGCTTACCATCGGCAGTCCGGCCAGAAATAAAAAATCGGACGTCTTAATCTAAAAGAACAACAGTGTAGGTGCATGGTGCAACGGTTGGTCAGGTGTACTGACAAGCAACGGAGCATGTATACAAACATGTTTCAAAATTTAAATGATTTTTA]


>consensus_7517#3 CGGTCGGCAGGGCGCTCCACGCGGAGGCTGTGAAATCCGCCAACGCCCATGACCGCCTCG TGGGCACCACGCTGGTGTCCGGTGTACTGCAAGTGCGGCCTCCTGGCCAACGCACGCGGG GTATTGGACAGAATGCCGGACCGGAACACCGTGACGTGTAATGCCATGCTCACCGGGTAT ACGGCGGCGGGCGACATGGCCAACGCTGAGGCGGTGTTTGCCGGCATGGGCTCACGGACG CCCGTCACGTGGGCGACGCTGATCCGGGGGTTCGCGGAGGAGCGCGACATGGTGGATGCG CGGCGGTGGTTCGAGGCCGCGCCGCCGGGCATGCGGAACGTCGTCACGTGGACCGTGGCT GTGCAGGGTTACATGGCCACGGGGGACATGGAGACCGCGAGGGAGCTGTTCGACAAGATG CCTACGTGGAACGCGTTCGTGTGGTCATCGATGGTCACTGGGTACTTCAAGGCTGGCAAT GCCAACGAAGCGCACGCGGTGTTCAACAGAATACCCGTGCGAAACTTGGTGAATTGGAAC ACGCTGATAGCGGAAATGCTTACCATCGGCAGTCCGGCCAGAAATAAAAAATCGGACGTC TTAATCTAAAAGAACAACAGTGTAGGTGCATGGTGCAACGGTTGGTCAGGTGTACTGACA AGCAACGGAGCATGTATACAAACATGTTTCAAAATTTAAATGATTTTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7517#1      AATAGCAGAAATATTTTTGTTTGACACCCCGACGTTATATAAGCCCGCGAGCCGCCGCCG 60
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      ---------------------------------------------GAAAAAATTAGGCAC 15
consensus_7517#2      ------------------------------------------TGAGGAAAAATTAGGCAC 18
                                                                                  

consensus_7517#1      CCGCCGCCGCTGCTAGGGCGGACGAGCGCTCGCCA-TGGCGGCTAGCCGAGCGAGGCAAC 119
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GTGTAATAGGAGGGAGAG--AGAGAGAGTATGCAAGCAGCAGCGCAAGCAATACATGCAG 73
consensus_7517#2      GTGTATTAGGAGGGAGAGGGAGAGAGAGTATGCAAGCAGCAGCGCAAGCAACACATGCAG 78
                                                                                  

consensus_7517#1      TCCACGCTCTCTACCTGACGAGAGGATGCCGTGACCCAGACATGTGGGCCAACCTCGCCA 179
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GGCAGGCAAGCAACGCAGCACGGGAG-------------------TGCGGGAGAGAGCAT 114
consensus_7517#2      TGCAGGCAAGCAACGCGGCACGGGAGCAACGTGGGCGAGCGGCAGTGCGGGGGCGAGCGT 138
                                                                                  

consensus_7517#1      AGGTCTACGCCTCCAACTCCTTCCTCCGGGAGGCCGCTATCATCTACTCGAAACTACTGC 239
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TGACCAACAAATGAAACATTAAGTTATATATGGTGAAACAAAGAATACAACAACTGAAAC 174
consensus_7517#2      TGACCAATAAGTGAAACATTAAGTTATATATGGTGAAA--AAAAAT-CAGCAATTGAAAC 195
                                                                                  

consensus_7517#1      CCCATCGTACTCACCACCTGCCCCTTGTCATCGTCCTCCTCAAGGCAACCGCCTCCCGCG 299
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      ATTTAAATATTTTTATGACACATGGTGAAGACACACGTTGAAACATGTCACTGTCACATA 234
consensus_7517#2      ATTTAAGTATTTT-ATGAAACATGGTGAAGATACACGTTGAAACATGTCGCTGTCACATA 254
                                                                                  

consensus_7517#1      CGGATCCCGTCCTCGGCAGGGCCCTCCACGCGGAGGCCG-TGAAATCCGCCAACGCCCAC 358
consensus_7517#3      ---------CGGTCGGCAGGGCGCTCCACGCGGAGGCTG-TGAAATCCGCCAACGCCCAT 50
consensus_7517#0      TGAAACAACAAGTATTGACGGATTGAAACATATGTGTTTCTTTTATTAAAATATAATCAT 294
consensus_7517#2      TAAAACAACAAGTATTAACGGATTAAAACATATATTTTTCTTTTATCAAAATATAATCAT 314
                                  *    * **      **           *   **      *    ** 

consensus_7517#1      G-ACCGCCTCGTGGGGACGACGCTGGTGTCCG-TGTACTGCAAGTGCGGCCTCCTGGCCG 416
consensus_7517#3      G-ACCGCCTCGTGGGCACCACGCTGGTGTCCGGTGTACTGCAAGTGCGGCCTCCTGGCCA 109
consensus_7517#0      GCGATATCTTGTTGTAGAGATTTAATTACAATGAATACAACG-GTGTGATCGGATCATAG 353
consensus_7517#2      GCGATATCTTGTTGTAAAGATTTAATTACAACGAATACAATG-GTGTGGTCGGATCATTG 373
                      *      ** ** *     *      *        ***     *** *  *   *     

consensus_7517#1      ACGCGCGCAGGGTGTTCGACGGAATGCTGGACCGGAACGCCGTGACGTGCA---ACGC-- 471
consensus_7517#3      ACGCACGCGGGGTATTGGACAGAATGCCGGACCGGAACACCGTGACGTGTA---ATGC-- 164
consensus_7517#0      ATTAAATAAGTAATTTAAAAGAAAATTCATTTTAAAGCTTGCTAAAATACATACATGT-T 412
consensus_7517#2      ATCGAATAAGTAATTTAAAAGAAAAATCATTTTGAAGCTTGCTAAAATACATGCATGTAT 433
                      *        *    **  *   **           * *    * *  *  *   * *   

consensus_7517#1      -CATGCTCGC--CGGGTACGCGGCGGCGGGAGACATGGTGAGCGCGGAGGCGCTGTTCGC 528
consensus_7517#3      -CATGCTCAC--CGGGTATACGGCGGCGGGCGACATGGCCAACGCTGAGGCGGTGTTTGC 221
consensus_7517#0      GCATGCATGAGGTGGAGAGAGAGTAGTAGCAGATAGTTTCACGAATTTTGTGAAACACAC 472
consensus_7517#2      GCATGCATGAGGTGGAGAGAGAGTAGTAGCAGGTAGTTTCAGGATTTTTGTGAAACACAC 493
                       *****       **  *    *  *  *  *  *     *        * *       *

consensus_7517#1      CGG-----CATGGGCTCACGGACTCCCGTCACGTGGGCAACGCT--GATCCGGGGGTTCG 581
consensus_7517#3      CGG-----CATGGGCTCACGGACGCCCGTCACGTGGGCGACGCT--GATCCGGGGGTTCG 274
consensus_7517#0      CGAAGACACATATTGAAACATATCATTATCACGTATGAAATATTTTATTCTAACGGTTTG 532
consensus_7517#2      CGAAGACACATATTGAAACATATCACTATCACGTATGAAACATTTTATTCTAACGGTTTG 553
                      **      ***      **  *      ******  *  *   *    **    **** *

consensus_7517#1      CGGGGAAGGGCGACATGGCGGAAACGCGGCGGTGGTTTGAGGCCATGCCGCTGGGCATGC 641
consensus_7517#3      CGGAGGAGCGCGACATGGTGGATGCGCGGCGGTGGTTCGAGGCCGCGCCGCCGGGCATGC 334
consensus_7517#0      -AAACATATGTTTTT-TTTTGACATAATATAATCATGTGATATCTTATTGTAAAG-ATTT 589
consensus_7517#2      -AAACACATGTTTTTCTTTTGACGTAATATAATCATGTGGTATCTTATTGTAAAG-ATTT 611
                               *          **          *  *  *    *     *    * **  

consensus_7517#1      AGAACGTCGTCACGTGGACCGTGGCCGTGCAGGCCTACGTTGCCGCGGGGGACATGGAGA 701
consensus_7517#3      GGAACGTCGTCACGTGGACCGTGGCTGTGCAGGGTTACATGGCCACGGGGGACATGGAGA 394
consensus_7517#0      A----ATTGCAACGAATACAACGGTGTGATCGGATCGTAGATCGGATAAGTAATTTAAGA 645
consensus_7517#2      A----ATTTCAACGAATACAACGGTGTTATCGGATCGTAGATCGGATAAGTAATTTAAGA 667
                            *    ***   **   **       **         *      * *  *  ***

consensus_7517#1      CCGCGAGGGAGCTGTTCAACAAGATGCCTGCGCGGAACGCGTTTGTGTGGT-CGT---CG 757
consensus_7517#3      CCGCGAGGGAGCTGTTCGACAAGATGCCTACGTGGAACGCGTTCGTGTGGT-CAT---CG 450
consensus_7517#0      GGAAAAA-TATTTAAA-AAGAGGATGAAAGAATGAAAAGAAGCAGCTAGGCACATACATT 703
consensus_7517#2      GAAAAAAATATCTAAA-GAGAGGAGGAAAGAATGAAAAGAAACAGCTAGGCACATACGTT 726
                           *   *  *     * * ** *       * ** *     *   **  * *     

consensus_7517#1      ATGGTCACCGGGAACTTCAAGGCTGGCAATGCCGAC---GAAGCGCAAGCGGTGTTCGAC 814
consensus_7517#3      ATGGTCACTGGGTACTTCAAGGCTGGCAATGCCAAC---GAAGCGCACGCGGTGTTCAAC 507
consensus_7517#0      ACAGTGACATGGTTCGTTCCCACATGCGCTCGTT-------TAGACGTCCGATTTTTGGT 756
consensus_7517#2      ACAGTGACAGGGTTCGTTCTCACATGCGCTCGTTGCCTGGCTAGACGTTCGATTTTTGGT 786
                      *  ** **  **  * *     *  **  *               *   ** * **    

consensus_7517#1      AAAATCCC---CGTGCGCAACTTGGTGAACTGGAACGCACTAATAGCAGGGTATGCCAAA 871
consensus_7517#3      AGAATACC---CGTGCGAAACTTGGTGAATTGGAACACGCTGATAGCGGAA-ATGCTTAC 563
consensus_7517#0      GTGATGCCGGACGTCCGAGCCGTAGCGCTCT----TCCGCTGATAGCGGGGTATGCCAAA 812
consensus_7517#2      GTGATGCCGGACGTCCGAGCCGTAGAGCTCT----CCCAATATT--CCTTCTCTCCCTTC 840
                         ** **   *** **   * * * *   *      *  *  *  *      * *    

consensus_7517#1      ATGGGATGCTGCGAGAAGGCACTGGAAGCATTTCACTCCATGCTAAAGGACAAGATCAAG 931
consensus_7517#3      CATCGGCAGTCCGGCCAGAAATAAAAAATCGGACGTCTTAATCTAAA-----AGAACAA- 617
consensus_7517#0      ATAGGATGCTCCGGGAAGGCACTGGAAGCATTTCACTCGATGCTGGATGACAGGATCAAG 872
consensus_7517#2      ATATT-CCCCCCATATATATATAACCACCTTTTTGATAAATTTCAAACTATTTTTTCT-- 897
                                 *    *   *     *            *      *         *   

consensus_7517#1      CCGGACGAGTTCACCATGGCAGGTGTTCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAG 991
consensus_7517#3      CAGTGTAGGTGCATGGTG-CAACGGTTGGTCAGGTGTACTGACAAGCAACGGAGC--ATG 674
consensus_7517#0      CCGGACGAGTTCACCATGGCAGGGGTGCTCTCTGCCTGCGCACAGCTCGGTTCGCTAGAG 932
consensus_7517#2      CTTAACTTACTT-CTATAATCTAAGATCCGTTTGGTC-CATTAAATTTGTTGTAATTAAA 955
                      *               *       *        *    *    *                

consensus_7517#1      CAAGCGAGAAAGGTTCACAATTTCATCATCCAGCACCGTATCCGGAAGAACCAGTTCGTT 1051
consensus_7517#3      TATACAAACATGTTTCAAAATTTAAATGATTTTTA------------------------- 709
consensus_7517#0      CAAGCAAGAAAGGTACATAGTTTCATCATCCAGCACCGTATCCGGAAGAACCACTTCGTT 992
consensus_7517#2      TCTTTGAAACAAGACCACA----CATGGTTATATTTTG-ATAAAAAAATATTTAGTTTTT 1010
                            *        ** *     *                                   

consensus_7517#1      ATGAATGGCCTGGTTGACATGTTCGCCAAGTGCGGTGACCTCGCTTTCGCACGAAATATC 1111
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CTGAATGGCCTGGTTGACATGTTCGCCAAGTGCGATGACCTCGCTTTCGCACGAAAGATC 1052
consensus_7517#2      CTTAATGTATTATTTTAAGTGTT--GCATATGGTTTTATTTGGATGTTTCAGCAAGTATT 1068
                                                                                  

consensus_7517#1      TTCGACAACATGCAATGGAGGAACACCGAATGCTGGAACTCGATGATCTCTGCACTTTCC 1171
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TTCGACAACATGCAATGGAGGAATACCGAATGCTGGAACTTGATGATCTCTGCACTTTCC 1112
consensus_7517#2      TT--ATGGTGTTTCAATAGTTAGAATCTAATGTTTTCA-TACATGATGTAAAAATGTTTC 1125
                                                                                  

consensus_7517#1      AGCCATGGACAGAGCATTGAGGCTATTCGGTTGTTCTCCAAGATGGAGTGTTCGGAGCAG 1231
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      ACCCATGGATAGAGCATAGAGGCTATTAAATTGTTCTCCAAGATGGAGTGTTCGGACCAG 1172
consensus_7517#2      ACTATATTATCAAGTGTTACAAATATATTGTATGTTTTAGATATT-ATTTTTCCGATTGT 1184
                                                                                  

consensus_7517#1      AAGCCTAATGAGATCACACTTCTTGCCGTACT---CGGAGCTTGCACA---CACGGAGGA 1285
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      AAGCCTAATGCGATCACACTTCTCGCTGTGCT---TGGAGCTTGCACG---CATGGAGGA 1226
consensus_7517#2      TTCATTGTTGGGACTCAATGTTTTACTGTTTTATATAGTGGCTAAATGTTTCATATAGTA 1244
                                                                                  

consensus_7517#1      TTTGTAGATGAAGGACTAAGAATCTTCAGCAAATTCGATATTTACGGGGTTGCTGCTGCA 1345
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TTTGTAGATGAAGGACTAAGAATCTTCAACAAGTTCGATGTTTACGGGGTTGCTGCTGCA 1286
consensus_7517#2      GTTATTGGTCTTGCAGTC--AATATTTGAAATGCTGCATCTCTCTAAAATATTTTGTAAA 1302
                                                                                  

consensus_7517#1      GTAGAGCATTACGGCTGCCTGGTTGATCTCTTGGGCCGTTCTGGAAGATTGAGGGAAGCT 1405
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GTGGAGCATTCTGGTTGCCTGGTTGACCTCCTGGCCTGTGCTGGAAGATTGAGAGAAGCT 1346
consensus_7517#2      GTGAAATAAAA------------------------------------------------- 1313
                                                                                  

consensus_7517#1      TATGAGATTGTCAAGAACATGCTTGTTGAACCCAATGAGGTGATCTGGGGCTCCCTGCTC 1465
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TATGAGATTGTCAAGAACATGCTTGTTCAACCAAACGAGGTGATCTGGTGCTCCTTACTC 1406
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      GGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATCCAC 1525
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GGAGCTTGCAGGGTGCATGGCGATGCAGAGATGTCTGAACTCGTATCAAGTGAGATTCAC 1466
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      CAATTGCACTCCCGTCGTGTGTCAACCAACGATGCAGAGTACATCTTGCTGTCAAATATC 1585
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CAATTGCACTCCTGTCGTGTGTCAACCAACGATGCAGAGTACATACTGCTGTCAAATATC 1526
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ATGGCCTCGTCGGAGAGGTGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCAT 1645
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      ATGGCCTCATCGGAGAGATGGGAGCAGGCTGAACGCATGAGGAGAAAGATGGCGCTCCAT 1586
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      GGAGTTGGGAAGACCCCAGGGTGCAGTTCAGTGGAGCTCGAGATTACTGAACACCAAGTA 1705
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GGAGTTGGGAAGACTCCAGGGTGCAGTTCAGTTGAGCTCGATGTTCCCGAACAACAAGTA 1646
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      TGTGCAGGCAGTGGTACGTTATCCCAGCTACACTGACTGCATTTTTTGCATGTCCCAAAT 1765
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CGCGCAGGCAGTG--AAAACATTTTCGCCAAATTTCCTAGATCAAAGGCGCCATAAAGGA 1704
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      GTTCTTCCGAAAGTGTTTTCACAAGTTGCCCAGAAAAGAAAAGCCCCTCATGTGCTGGAT 1825
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GTTGGGAAGACTCCAGCAGGGTGCAGTTCAGTTGATCTTGACATTCCTGAACACCAAGTA 1764
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ATTCTATTAACTGTACTTCTTATACATAGATGATTAGACAAGGACATTAGATTATTAGAC 1885
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CACCCAGGCAGTGGTGCATGTGGCGCCCCGCTGGGGCCTGAACACGCATGCCGCCAAGAT 1824
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      AAGGGAATTATCTGTTCTGTTGCATCCCTTTATCAACTGGTGCTGGCATAGAAATAACTA 1945
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CCCCTTTCTCGGAGACACCCCGGGCTTGTGAGCCCATGAGCAATGGGAGGCGCCGCCGCG 1884
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      CACACTTCGTGTCAATTTTATATGCTAATATCAGTCAACAGGCACAATTGAAT------- 1998
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CACCTCCGTCCTGGAAGGAGCGGACCGCGGACGCGCTCGCACCGCTGTCGGACTGGCTCG 1944
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      AGCCTACCTCCCCCGAACCACCGCGCCCACTTCCTTCCGCAACTGCAGTCGCCCGCGGTG 2004
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CGTTTGCGTAGCCGCCGACAACCTTCGCTTGAGTAGAGGACATGGCATCCACCGTCCTCT 2064
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CGTTCACGGAGTTTTCTCTTCGGGCGCGCGACCACCCCACGCACCAATGAGAGGTTCTAC 2124
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TACATTGGGGATCTGAAGCCCCAGGCTCAGCAGTTCATCTTACTGAACTTCTTTTTTAAT 2184
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      AAAAAGGAATCATTGTGTATGCAGTGAGAGGACACCAGCTGCTGATTTGAGGTGCTGCTC 2244
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      ACAGTCACTGGTTTCGAACATTGGGTAGAGTTCCCAAAAGAGTGGATGAGGTGAGCACTC 2304
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      AACAGGAACCATCAGGCAACAACCATCCTTCAGCTATATAATACAGTAATTGCAAAGTCA 2364
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TGGCAGGCTTTCTTATGATACATCACCCTAAAATCAGAAAAAAGGTGATGGCCACTTTTA 2424
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CTAGCTTAGTGGGTCAAAAGTCAAAACAAGCTGAAGCTCCACCTCCACTGTATCCTAGTA 2484
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      TGTTCATCAATACGGGCCAAAAAAATTATGCTTGTCTTGTGCCAAAAGTACTGGGATGTG 2544
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      CCCATCGAGGCTTTGCAAGTGTTTACGAGCTGTTCGAATTACTGTTAGGTGGGGTTTATT 2604
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------------------------------------
consensus_7517#3      ------------------------------------------------------------
consensus_7517#0      GGTAACCGGTATCTATGTAAAAGGTGCATTTAACAGTCCTGGTGGCTGATGTTATTTTAA 2664
consensus_7517#2      ------------------------------------------------------------
                                                                                  

consensus_7517#1      ------------------------------
consensus_7517#3      ------------------------------
consensus_7517#0      GAACAAGAAACCTGACGTTTCAAGATGAAT 2694
consensus_7517#2      ------------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)