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Oryza sativa
cluster # 7520 cluster # 7520       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7520#0 length = 2726 sequences # 4  

consensusID : consensus_7520#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2726
fasta sequence
                              [GCCATTTTCCCTTTTTCCTCACTCCCCCATCTCTCTCTCTCCGTCGCTCGTCGCGATCTCGCCGAAACCCTAGCCAAAACCCCCGTGGGGGAGGGGATCGGAGAGATGCTGCACGAGCTCCTCCTCGCGCTGCTCGGCTTCACCGGCGACTTCGTCCTCGACGCCGCCTCCTCCCCGTCGGCCACCCGCCGCCGCCGCCCTGTTCCCCCGGAGGCCGCCGCCGGCGGCGACGTGGGCCCCGCCTCCTTCCGCCTCGCCCCCGACCTCACCTTCCTGCAGCCGTCCGAGAGGAGTGCTATTGAAAGGCTCATATCCTTGGGCTTTTACTACAGAGAACTAAATCGCTTTGCAACTGAGTCTCGTGACCTGAGTTGGATCAATTCTCCTATAGATGTTTCACCAACTCATGGTGAGAAAACTGTGAAGGCTAAAGTGAGAAAAGGGAGTGCATACAGGAGAGCGATTGCCAATGGTATTGCTGAGATTTTGTCAGTTTATAGATCAGCTGTTCTGCAGGTTGAGCAAAACCTGTTGTCAGATCCTTTGCCTATCCTGGCAACGGTAACTCATGGGCTAAATAAGTTTGAAGTTCTCCTGCCTCCGCTCCATGAACTTGTTATGGAAATTGAGCAGAAAGACATCAAAGGAGGACAACTTCTTAACCTTTTGCATAAACGATGCCATTGTGGTGTTCCAGAACTGCAAAGCTGTATTCAAAGACTTCTTTGGCATGGACACCAAGTCATGTTTAACCAGCTGACATCTTGGATGGTTTACGGGATCCTTCAAGATCAATACAATGAATTTTTCATTAGAAGACAGGAAGACAGGGACAAGGAGAATGATTCATCTCAGGTGGACGTTGCTGATAAGTTTACGCAGAAATCAGCTAAAGAGACATCCCTGACTAGTTGGCACACAGGATTTCATGTATCTTTGGATATGCTACCTGAGTATATCCACATGCGAGTTGCAGAATCGATCCTCTTTGCTGGCAAAGCAATAAGGGTTCTTCGAAATCCTAGTCCTGGTGCTACCTTGCAGGAATCCATGAACCAAAGTCAGAATGTGAAAGGATCTTATAGAATGCAAAGTCTCATAGGAGGTTCAGGTGCTCTAAAAGAGCTACCAAACTTCCCTAACATAAGTGCAGAAGAATTGTTGCCACAGGCTGAAGCAGATAAAATTGATGCCATGCTCAAGGAGCTAAAGCATTCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCAATACGAACAATGGCAGCTAATAATCTCTGGCAGCTAGTGGTTGTACGTGCTGATCTTAATGGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGTGTTTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCAGATCTCATGGTCCCATTTCAATTGGCTGCACTGAAGACTATAGGTGATGAGGACAAATATTTTGCTAGAGTCTCATTAAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAAGATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTGGCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTTTTCTTTACTCCTGATGTTGTGTCCAAGTATCGCAAGGTTTTCCAGTATCTCATCCGATTGAAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATTTGTCAGCACTAATTTCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTCTGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATTGATCACATAACTGAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGCAGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGTTACGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTTTCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTAGCATCTTAATGGAAGTTTGCCCTGTAAAGTGTGAGTGCTAGATTATGGTTGTTTGGTGCTGATGGTGTGTGATTGTGCTAGCTTGTCTACATTTCTCGCTTTGTCATCTGCTAATGCCAGCTTTTTCAACCTTTGAGCGTTGGATTAAGCCATTGGACGCCATCAGATCGTGTCCTTGGGTAAATTATGGGTGTTAACCTGGGTTAACTACATTAACCAGATGTAGATCAGCTTGTCAACGAAGTAGAGCACATTAAGGCCAAAAA]

[+] EMBL AK119462             [GCCATTTTCCCTTTTTCCTCACTCCCCCATCTCTCTCTCTCCGTCGCTCGTCGCGATCTCGCCGAAACCCTAGCCAAAACCCCCGTGGGGGAGGGGATCGGAGAGATGCTGCACGAGCTCCTCCTCGCGCTGCTCGGCTTCACCGGCGACTTCGTCCTCGACGCCGCCTCCTCCCCGTCGGCCACCCGCCGCCGCCGCCCTGTTCCCCCGGAGGCCGCCGCCGGCGGCGACGTGGGCCCCGCCTCCTTCCGCCTCGCCCCCGACCTCACCTTCCTGCAGCCGTCCGAGAGGAGTGCTATTGAAAGGCTCATATCCTTGGGCTTTTACTACAGAGAACTAAATCGCTTTGCAACTGAGTCTCGTGACCTGAGTTGGATCAATTCTCCTATAGATGTTTCACCAACTCATGGTGAGAAAACTGTGAAGGCTAAAGTGAGAAAAGGGAGTGCATACAGGAGAGCGATTGCCAATGGTATTGCTGAGATTTTGTCAGTTTATAGATCAGCTGTTCTGCAGGTTGAGCAAAACCTGTTGTCAGATCCTTTGCCTATCCTGGCAACGGTAACTCATGGGCTAAATAAGTTTGAAGTTCTCCTGCCTCCGCTCCATGAACTTGTTATGGAAATTGAGCAGAAAGACATCAAAGGAGGACAACTTCTTAACCTTTTGCATAAACGATGCCATTGTGGTGTTCCAGAACTGCAAAGCTGTATTCAAAGACTTCTTTGGCATGGACACCAAGTCATGTTTAACCAGCTGACATCTTGGATGGTTTACGGGATCCTTCAAGATCAATACAATGAATTTTTCATTAGAAGACAGGAAGACAGGGACAAGGAGAATGATTCATCTCAGGTGGACGTTGCTGATAAGTTTACGCAGAAATCAGCTAAAGAGACATCCCTGACTAGTTGGCACACAGGATTTCATGTATCTTTGGATATGCTACCTGAGTATATCCACATGCGAGTTGCAGAATCGATCCTCTTTGCTGGCAAAGCAATAAGGGTTCTTCGAAATCCTAGTCCTGGTGCTACCTTGCAGGAATCCATGAACCAAAGTCAGAATGTGAAAGGATCTTATAGAATGCAAAGTCTCATAGGAGGTTCAGGTGCTCTAAAAGAGCTACCAAACTTCCCTAACATAAGTGCAGAAGAATTGTTGCCACAGGCTGAAGCAGATAAAATTGATGCCATGCTCAAGGAGCTAAAGCATTCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCAATACGAACAATGGCAGCTAATAATCTCTGGCAGCTAGTGGTTGTACGTGCTGATCTTAATGGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGTGTTTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCAGATCTCATGGTCCCATTTCAATTGGCTGCACTGAAGACTATAGGTGATGAGGACAAATATTTTGCTAGAGTCTCATTAAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAAGATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTGGCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTTTTCTTTACTCCTGATGTTGTGTCCAAGTATCGCAAGGTTTTCCAGTATCTCATCCGATTGAAGAGGACACAAACGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATTTGTCAGCACTAATTTCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTCTGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATTGATCACATAACTGAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGCAGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGTTACGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTTTCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTAGCATCTTAATGGAAGTTTGCCCTGTAAAGTGTGA                                                                                                                                                                                                                                        ]
[+] EMBL CB660899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCAATACGAACAATGGCAGCTAATAATCTCTGGCAGCTAGTGGTTGTACGTGCTGATCTTAATGGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGTGTTTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCAGATCTCATGGTCCCATTTCAATTGGCTGCACTGAAGACTATAGGTGATGAGGACAAATATTTTGCTAGAGTCTCATTAAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAAGATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTGGCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTTTTCTTTACTCCTGATGTTGTGTCCAAGTATCGCAAGGTTTTCCAGTATCTCATCCGATTGAAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATNTGTCAGCACTAATTTCGCAATCCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB660900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTATCTCATCCGATTGAAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTTTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATTTGTCAGCACTAATTTCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTCTGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATTGATCACATAACTGAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGCAGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGTTACGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTTTCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTAGCATCTTAATGGAAGTTTGCCCTGTAGAGTGTGAGTGCTAGATTATGGTTGTTTGGTGC                                                                                                                                                                                                               ]
[+] EMBL BI801456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ggCTGA GCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGCTACGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTTTCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTAGCATCTTAATGGAAGTTTGCCCTGTAAA  GTGAGTGCTAGATTATGGTTGTTTTGTGCTGATGGTGTGTGATTGTGCTAGCTTGTCTACATTTCTCGCTTTGTCATCTGCTAATGCCAGCTTTTTCAACCTTTGAGCGTTGGATTAAGCCATTGGACGCCATCAGATCGTGTCCTTGGGTAAATTATGGGTGTTAACCTGGGTTAACTACATTAACCAGATGTAGATCAGCTTGTCAACGAAGTAGAGCACATTAAGGCCAAAAA]


>consensus_7520#0 GCCATTTTCCCTTTTTCCTCACTCCCCCATCTCTCTCTCTCCGTCGCTCGTCGCGATCTC GCCGAAACCCTAGCCAAAACCCCCGTGGGGGAGGGGATCGGAGAGATGCTGCACGAGCTC CTCCTCGCGCTGCTCGGCTTCACCGGCGACTTCGTCCTCGACGCCGCCTCCTCCCCGTCG GCCACCCGCCGCCGCCGCCCTGTTCCCCCGGAGGCCGCCGCCGGCGGCGACGTGGGCCCC GCCTCCTTCCGCCTCGCCCCCGACCTCACCTTCCTGCAGCCGTCCGAGAGGAGTGCTATT GAAAGGCTCATATCCTTGGGCTTTTACTACAGAGAACTAAATCGCTTTGCAACTGAGTCT CGTGACCTGAGTTGGATCAATTCTCCTATAGATGTTTCACCAACTCATGGTGAGAAAACT GTGAAGGCTAAAGTGAGAAAAGGGAGTGCATACAGGAGAGCGATTGCCAATGGTATTGCT GAGATTTTGTCAGTTTATAGATCAGCTGTTCTGCAGGTTGAGCAAAACCTGTTGTCAGAT CCTTTGCCTATCCTGGCAACGGTAACTCATGGGCTAAATAAGTTTGAAGTTCTCCTGCCT CCGCTCCATGAACTTGTTATGGAAATTGAGCAGAAAGACATCAAAGGAGGACAACTTCTT AACCTTTTGCATAAACGATGCCATTGTGGTGTTCCAGAACTGCAAAGCTGTATTCAAAGA CTTCTTTGGCATGGACACCAAGTCATGTTTAACCAGCTGACATCTTGGATGGTTTACGGG ATCCTTCAAGATCAATACAATGAATTTTTCATTAGAAGACAGGAAGACAGGGACAAGGAG AATGATTCATCTCAGGTGGACGTTGCTGATAAGTTTACGCAGAAATCAGCTAAAGAGACA TCCCTGACTAGTTGGCACACAGGATTTCATGTATCTTTGGATATGCTACCTGAGTATATC CACATGCGAGTTGCAGAATCGATCCTCTTTGCTGGCAAAGCAATAAGGGTTCTTCGAAAT CCTAGTCCTGGTGCTACCTTGCAGGAATCCATGAACCAAAGTCAGAATGTGAAAGGATCT TATAGAATGCAAAGTCTCATAGGAGGTTCAGGTGCTCTAAAAGAGCTACCAAACTTCCCT AACATAAGTGCAGAAGAATTGTTGCCACAGGCTGAAGCAGATAAAATTGATGCCATGCTC AAGGAGCTAAAGCATTCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCA ATACGAACAATGGCAGCTAATAATCTCTGGCAGCTAGTGGTTGTACGTGCTGATCTTAAT GGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGTGT TTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCA GATCTCATGGTCCCATTTCAATTGGCTGCACTGAAGACTATAGGTGATGAGGACAAATAT TTTGCTAGAGTCTCATTAAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAA GATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTG GCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTT TTCTTTACTCCTGATGTTGTGTCCAAGTATCGCAAGGTTTTCCAGTATCTCATCCGATTG AAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCT GATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAA CGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAG TTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAA GATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATTTGTCAGCACTAATT TCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTC TGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATT GATCACATAACTGAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGC AGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAAT TACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGTTA CGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTT TCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTA GCATCTTAATGGAAGTTTGCCCTGTAAAGTGTGAGTGCTAGATTATGGTTGTTTGGTGCT GATGGTGTGTGATTGTGCTAGCTTGTCTACATTTCTCGCTTTGTCATCTGCTAATGCCAG CTTTTTCAACCTTTGAGCGTTGGATTAAGCCATTGGACGCCATCAGATCGTGTCCTTGGG TAAATTATGGGTGTTAACCTGGGTTAACTACATTAACCAGATGTAGATCAGCTTGTCAAC GAAGTAGAGCACATTAAGGCCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)