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Oryza sativa
cluster # 7600 cluster # 7600       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7600#0 length = 2286 sequences # 5  

consensusID : consensus_7600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2286
fasta sequence
                              [CCACTCTCCTTGCTCCGCCCCCGCCGCGTCGCCGTCGCTATTGCGCCGCCGCCGCCGCCGCCGCCGACGCCGTGCGTCGCGAAGTGCTACCAGGAATGCTGGGATGAATTCATATTGTGATAAGAAAGAGGTTACTGTAGCTTTTAGCAAAACTAAAAGGCAAGAGGAGGATGAAGTGATTTGGAGAATGGTAGAACAAGGCGCTACAGATGATGAAGAGTGTGGTGGTACCAACTGTTCGGCTGGCGAAAATAGGGATCCTGGTTGGCCTGGAACGAGTGTCTTCAGGATGCTGATTCCTGCAACTAAAGTTGGCGCAGTAATTGGTCACAGTGGAGAAAGGCTTAGAAGACTGTGTGAGGAAACAAAAGCCTGCGTCCGAGTAATAGGTGGCCACTTTGCTGCTGCAGAGCGAGCTGTAATCATTTTTGCAAAGGAACAACCTGATGAGCCAAAACCTCCAGCTATTGATGCACTACTAAGAGTATATGAGTGTATAATCAATGATGATGGTTTAGATGTGAGATATAACAATATAGTTGTGGCACGGATTCTTACACCAAGTGAACAGGCAGCAAGCCTTATTGGCGATCAGGGTTCAGTGATTAATTATATCAAGAAAGCTTCTAAAACCAACATCCATGTTATTGACGGTGACTTGCCACCTGTTGCACTTGAAGATGATATGATTATTGAAATTTGGGGACTGCCTGCAAGAGTGCATCAAGCATTGGAACTTGTTGCTTGTCATTTGAGAAAGTACCTGGTTCATCGAAGTGTCATCCCACTGTTTGACCCCCATGTGTCTATTCCAATCTCACCTGTGGATATGCCCCCATTCCACTACAGTGACCATCATGAGGGCCTTCTGCACGAAGCTAGTCCAGGCTATTACTCCCTATATGCTGAAGCTTTTCAACTTGAACACCCATGGACTGATACTAGTTATTCAAGGTATCCAATGGAAAACTTTACACATGCTGACATATTTGAATACAGACAAGAAGCACCAGTATTTTTTGGGAGATATCGGTCAGTCACACCTCCACATTATGGGCATGAAGCAGAAGCATATTTATCATCTCCAATGGAATTATGTTTGCATAACAACCTGAATACATATGGATGGCAAGCAACTCCACCAATTGGTCGATCAGATACTGTTGAAAGAATACGCTCCCTTATATCTGTGTATGGAAAACAGGCACATCCACATCCGCTGAGGCAGACATATCAATCAACTAAAATGGAAAAACATCCACACTCGGGGATATCTTTGTACAGAAGGGATGATCATCCAACAAGGGTATCTCCATCACCTGCTACTGAACTACCCCCATCTCCTGCTGTTTCTGCATATAAATGGCAAGTATCTCCATCCTTAAAGATGTATCCTTCAACTAATGTCGAAAACCTTCAACACTGCCGTGTTTCTGCATGCGCTCCAGAAGAACTGCCAAATGTGGTTGTGCCTTCGTTAACTAGTCAATCTCCTGCAGTCACTTCTCAGGTTATAATGAAGATGCAAGTTCCAATTTTCTATGCTGAAGCGGTAATTGGCCCAACTGGTGCACGAATTGATTACATTCGCCAAGCCAGCGGATCAAGCGTCGTGATAAAGGATCTTGATGACAGTGCAATGTCTATTGAGATCACTGGAAGTGCTGCAACAGATGTTCAAATTGCAGAGCAGTTGATAAAGAACTTCATGGCTGAAGCTGCTGCCGCTTCCCCTGATCACAGTTATGACTTCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCCAACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCTGCAAGCGACCTACTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTACACCGGCAATACAGGAAATCCGCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCCTTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGACTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGATCCATGGGTTAGAAGTCTGAGATTATGGTATAGGACAACAATTTTTTGGTGGATTCAGGGTAAGTGATGTACAAGATATGTGCCCTCAGATGTTTGAGAGACAGTTTGTATTACATGACAACATGCATTATGTTATCTACAAACTAAAATTCACTTTTAAAAAAAAAAAAAAAAACACTGTCCATGCCGT]

[+] EMBL AK099068             [CCACTCTCCTTGCTCCGCCCCCGCCGCGTCGCCGTCGCTATTGCGCCGCCGCCGCCGCCGCCGCCGACGCCGTGCGTCGCGAAGTGCTACCAGGAATGCTGGGATGAATTCATATTGTGATAAGAAAGAGGTTACTGTAGCTTTTAGCAAAACTAAAAGGCAAGAGGAGGATGAAGTGATTTGGAGAATGGTAGAACAAGGCGCTACAGATGATGAAGAGTGTGGTGGTACCAACTGTTCGGCTGGCGAAAATAGGGATCCTGGTTGGCCTGGAACGAGTGTCTTCAGGATGCTGATTCCTGCAACTAAAGTTGGCGCAGTAATTGGTCACAGTGGAGAAAGGCTTAGAAGACTGTGTGAGGAAACAAAAGCCTGCGTCCGAGTAATAGGTGGCCACTTTGCTGCTGCAGAGCGAGCTGTAATCATTTTTGCAAAGGAACAACCTGATGAGCCAAAACCTCCAGCTATTGATGCACTACTAAGAGTATATGAGTGTATAATCAATGATGATGGTTTAGATGTGAGATATAACAATATAGTTGTGGCACGGATTCTTACACCAAGTGAACAGGCAGCAAGCCTTATTGGCGATCAGGGTTCAGTGATTAATTATATCAAGAAAGCTTCTAAAACCAACATCCATGTTATTGACGGTGACTTGCCACCTGTTGCACTTGAAGATGATATGATTATTGAAATTTGGGGACTGCCTGCAAGAGTGCATCAAGCATTGGAACTTGTTGCTTGTCATTTGAGAAAGTACCTGGTTCATCGAAGTGTCATCCCACTGTTTGACCCCCATGTGTCTATTCCAATCTCACCTGTGGATATGCCCCCATTCCACTACAGTGACCATCATGAGGGCCTTCTGCACGAAGCTAGTCCAGGCTATTACTCCCTATATGCTGAAGCTTTTCAACTTGAACACCCATGGACTGATACTAGTTATTCAAGGTATCCAATGGAAAACTTTACACATGCTGACATATTTGAATACAGACAAGAAGCACCAGTATTTTTTGGGAGATATCGGTCAGTCACACCTCCACATTATGGGCATGAAGCAGAAGCATATTTATCATCTCCAATGGAATTATGTTTGCATAACAACCTGAATACATATGGATGGCAAGCAACTCCACCAATTGGTCGATCAGATACTGTTGAAAGAATACGCTCCCTTATATCTGTGTATGGAAAACAGGCACATCCACATCGGCTGAGGCAGACATATCAATCAACTAAAATGGAAAAACATCCACACTCGGGGATATCTTTGTACAGAAGGGATGATCATCCAACAAGGGTATCTCCATCACCTGCTACTGAACTACCCCCATCTCCTGCTGTTTCTGCATATAAATGGCAAGTATCTCCATCCTTAAAGATGTATCCTTCAACTAATGTCGAAAACCTTCAACACTGCCGTGTTTCTGCATGCGCTCCAGAAGAACTGCCAAATGTGGTTGTGCCTTCGTTAACTAGTCAATCTCCTGCAGTCACTTCTCAGGTTATAATGAAGATGCAAGTTCCAATTTTCTATGCTGAAGCGGTAATTGGCCCAACTGGTGCACGAATTGATTACATTCGCCAAGCCAGCGGATCAAGCGTCGTGATAAAGGATCTTGATGACAGTGCAATGTCTATTGAGATCACTGGAAGTGCTGCAACAGATGTTCAAATTGCAGAGCAGTTGATAAAGAACTTCATGGCTGAAGCTGCTGCCGCTTCCCCTGATCACAGTTATGACTTCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCCAACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCTGCAAGCGACCTACTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTACACCGGCAATACAGGAAATCCGCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCCTTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGACTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGATCCATGGGTTAGAAGTCTGAGATTATGGTATAGGACAACAATTTTTTGGTGGATTCAGGGTAAGTGATGTACAAGATATGTGCCCTCAGATGTTTGAGAGACAGTTT                                                                                   ]
[+] EMBL AK063266             [ CACTCTCCTTGCTCCGCCCCCGCCGCGTCGCCGTCGCCATTGCGCCGCCGCCGCCGCCGCCGCCGACGCCGTGCGTCGCGAAGTGCTACCAGGAATGCTGGGATGAATTCATATTGTGATAAGAAAGAGGTTACTGTAGCTTTTAGCAAAACTAAAAGGCAAGAGGAGGATGAAGTGATTTGGAGAATGGTAGAACAAGGCGCTACAGATGATGAAGAGTGTGGTGGTACCAACTGTTCGGCTGGCGAAAATAGGGATCCTGGTTGGCCTGGAACGAGTGTCTTCAGGATGCTGATTCCTGCAACTAAAGTTGGCGCAGTAATTGGTCACAGTGGAGAAAGGCTTAGAAGACTGTGTGAGGAAACAAAAGCCTGCGTCCGAGTAATAGGTGGCCACTTTGCTGCTGCAGAGCGAGCTGTAATCATTTTTGCAAAGGAACAACCTGATGAGCCAAAACCTCCAGCTATTGATGCACTACTAAGAGTATATGAGTGTATAATCAATGATGATGGTTTAGATGTGAGATATAACAATATAGTTGTGGCACGGATTCTTACACCAAGTGAACAGGCAGCAAGCCTTATTGGCGATCAGGGTTCAGTGATTAATTATATCAAGAAAGCTTCTAAAACCAACATCCATGTTATTGACGGTGACTTGCCACCTGTTGCACTTGAAGATGATATGATTATTGAAATTTGGGGACTGCCTGCAAGAGTGCATCAAGCATTGGAACTTGTTGCTTGTCATTTGAGAAAGTACCTGGTTCATCGAAGTGTCATCCCACTGTTTGACCCCCATGTGTCTATTCCAATCTCACCTGTGGATATGCCCCCATTCCACTACAGTGACCATCATGAGGGCCTTCTGCACGAAGCTAGTCCAGGCTATTACTCCCTATATGCTGAAGCTTTTCAACTTGAACACCCATGGACTGATACTAGTTATTCAAGGTATCCAATGGAAAACTTTACACATGCTGACATATTTGAATACAGACAAGAAGCACCAGTATTTTTTGGGAGATATCGGTCAGTCACACCTCCACATTATGGGCATGAAGCAGAAGCATATTTATCATCTCCAATGGAATTATGTTTGCATAACAACCTGAATACATATGGATGGCAAGCAACTCCACCAATTGGTCGATCAGATACTGTTGAAAGAATACGCTCCCTTATATCTGTGTATGGAAAACAGGCACATCCACATCCGCTGAGGCAGACATATCAATCAACTAAAATGGAAAAACATCCACACTCGGGGATATCTTTGTACAGAAGGGATGATCATCCAACAAGGGTATCTCCATCACCTGCTACTGAACTACCCCCATCTCCTGCTGTTTCTGCATATAAATGGCAAGTATCTCCATCCTTAAAGATGTATCCTTCAACTAATGTCGAAAACCTTCAACACTGCCGTGTTTCTGCATGCGCTCCAGAAGAACTGCCAAATGTGGTTGTGCCTTCGTTAACTAGTCAATCTCCTGCAGTCACTTCTCAGGTTATAATGAAGATGCAAGTTCCAATTTTCTATGCTGAAGCGGTAATTGGCCCAACTGGTGCACGAATTGATTACATTCGCCAAGCCAGCGGATCAAGCGTCGTGATAAAGGATCTTGATGACAGTGCAATGTCTATTGAGATCACTGGAAGTGCTGCAACAGATGTTCAAATTGCAGAGCAGTTGATAAAGAACTTCATGGCTGAAGCTGCTGCCGCTTCCCCTGATCACAGTTATGACTTCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCCAACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCTGCAAGCGACCTACTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTACACCGGCAATACAGGAAATCCGCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCCTTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGACTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGATCCATGGGTTAGAAGTCTGAGATTATGGTATAGGACAACAATTTTTTGGTGGATTCAGGGTAAGTGATGTACAAGATATGTGCCCTCAGATGTTTGAGAGACAGTTTGTATTACATGACAACATGCATTATGTTATCTACAAACTAAA                                          ]
[+] EMBL CF315000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGGTCAGTCACACCTCCACATTATGGGCATGAAGCAGAAGCATATTTATCATCTCCAATGGAATTATGTTTGCATAACAACCTGAATACATATGGATGGCAAGCAACTCCACCAATTGGTCGATCAGATACTGTTGAAAGAATACGCTCCCTTATATCTGTGTATGGAAAACAGGCACATCCACATCCGCTGAGGCAGACATATCAATCAACTAAAATGGAAAAACATCCACACTCGGGGATATCTTTGTACAGAAGGGATGATCATCCAACAAGGGTATCTCCATCACCTGCTACTGAACTACCCCCATCTCCTGCTGTTTCTGCATATAAATGGCAAGTATCTCCATCCTTAAAGATGTATCCTTCAACTAATGTCGAAAACCTTCAACACTGCCGTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF331138             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       acggcATGACAGTGCAGTGCCTATTGAGATCACTGGAAGTGCTGCAACAGATGTTCAAATTGCAGAGCAGTTGATAAAGAACTTCATGGCTGAAGCTGCTGCCGCTTCCCCTGATCACAGTTATGACTTCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCCAACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCCGCAAGCGACCTACTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTACACCGGCAATACAGGAAATCCGCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCCTTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGACTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGA                                                                                                                                                                                              ]
[-] EMBL CF315001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCCAACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCTGCAAGCGACCTACTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTCCACCGGCAATACAGGAAATCCGCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCCTTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGACTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGATCCATGGGTTAGAAGTCTGAGATTATGGTATAGGACAACAATTTTTTGGTGGATTCAGGGTAAGTGATGTACAAGATATGTGCCCTCAGATGTTTGAGAGACAGTTTGTATTACATGACAACATGCATTATGTTATCTACAAACTAAAATTCACTTTTAAAAAAAAAAAAAAAAACACTGTCCATGCCGT]


>consensus_7600#0 CCACTCTCCTTGCTCCGCCCCCGCCGCGTCGCCGTCGCTATTGCGCCGCCGCCGCCGCCG CCGCCGACGCCGTGCGTCGCGAAGTGCTACCAGGAATGCTGGGATGAATTCATATTGTGA TAAGAAAGAGGTTACTGTAGCTTTTAGCAAAACTAAAAGGCAAGAGGAGGATGAAGTGAT TTGGAGAATGGTAGAACAAGGCGCTACAGATGATGAAGAGTGTGGTGGTACCAACTGTTC GGCTGGCGAAAATAGGGATCCTGGTTGGCCTGGAACGAGTGTCTTCAGGATGCTGATTCC TGCAACTAAAGTTGGCGCAGTAATTGGTCACAGTGGAGAAAGGCTTAGAAGACTGTGTGA GGAAACAAAAGCCTGCGTCCGAGTAATAGGTGGCCACTTTGCTGCTGCAGAGCGAGCTGT AATCATTTTTGCAAAGGAACAACCTGATGAGCCAAAACCTCCAGCTATTGATGCACTACT AAGAGTATATGAGTGTATAATCAATGATGATGGTTTAGATGTGAGATATAACAATATAGT TGTGGCACGGATTCTTACACCAAGTGAACAGGCAGCAAGCCTTATTGGCGATCAGGGTTC AGTGATTAATTATATCAAGAAAGCTTCTAAAACCAACATCCATGTTATTGACGGTGACTT GCCACCTGTTGCACTTGAAGATGATATGATTATTGAAATTTGGGGACTGCCTGCAAGAGT GCATCAAGCATTGGAACTTGTTGCTTGTCATTTGAGAAAGTACCTGGTTCATCGAAGTGT CATCCCACTGTTTGACCCCCATGTGTCTATTCCAATCTCACCTGTGGATATGCCCCCATT CCACTACAGTGACCATCATGAGGGCCTTCTGCACGAAGCTAGTCCAGGCTATTACTCCCT ATATGCTGAAGCTTTTCAACTTGAACACCCATGGACTGATACTAGTTATTCAAGGTATCC AATGGAAAACTTTACACATGCTGACATATTTGAATACAGACAAGAAGCACCAGTATTTTT TGGGAGATATCGGTCAGTCACACCTCCACATTATGGGCATGAAGCAGAAGCATATTTATC ATCTCCAATGGAATTATGTTTGCATAACAACCTGAATACATATGGATGGCAAGCAACTCC ACCAATTGGTCGATCAGATACTGTTGAAAGAATACGCTCCCTTATATCTGTGTATGGAAA ACAGGCACATCCACATCCGCTGAGGCAGACATATCAATCAACTAAAATGGAAAAACATCC ACACTCGGGGATATCTTTGTACAGAAGGGATGATCATCCAACAAGGGTATCTCCATCACC TGCTACTGAACTACCCCCATCTCCTGCTGTTTCTGCATATAAATGGCAAGTATCTCCATC CTTAAAGATGTATCCTTCAACTAATGTCGAAAACCTTCAACACTGCCGTGTTTCTGCATG CGCTCCAGAAGAACTGCCAAATGTGGTTGTGCCTTCGTTAACTAGTCAATCTCCTGCAGT CACTTCTCAGGTTATAATGAAGATGCAAGTTCCAATTTTCTATGCTGAAGCGGTAATTGG CCCAACTGGTGCACGAATTGATTACATTCGCCAAGCCAGCGGATCAAGCGTCGTGATAAA GGATCTTGATGACAGTGCAATGTCTATTGAGATCACTGGAAGTGCTGCAACAGATGTTCA AATTGCAGAGCAGTTGATAAAGAACTTCATGGCTGAAGCTGCTGCCGCTTCCCCTGATCA CAGTTATGACTTCATTCCATCACATTTGCCAGCACCGAGATCTCCAGAGCCAGATATTCC AACTACTTCACTCACTCGCAGAGCAAGCTGTTTTACAGAACCTCGCCTGCAAGCGACCTA CTGAGTTCCCAAGAGTTCTCTTTCTGCACATAGTCCCTACACCGGCAATACAGGAAATCC GCGAGAGTACATTCCCAGAAAGTTTTGATATCCATCCTCAGATGATTAATATGCGCCCCC TTTTTGAACCCCCAAGACTTGTATCTAATATTTTCTTTTTCTTTGGCTTTTAGCCATAGA CTTTGATCCATGAGTTAGAAATTGACTCTGATCCATGAGTTAGAAATAGACCTTGATCCA TGGGTTAGAAGTCTGAGATTATGGTATAGGACAACAATTTTTTGGTGGATTCAGGGTAAG TGATGTACAAGATATGTGCCCTCAGATGTTTGAGAGACAGTTTGTATTACATGACAACAT GCATTATGTTATCTACAAACTAAAATTCACTTTTAAAAAAAAAAAAAAAAACACTGTCCA TGCCGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)