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Oryza sativa
cluster # 7609 cluster # 7609       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7609#0 length = 1103 sequences # 5  

consensusID : consensus_7609#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1103
fasta sequence
                              [GGCCGCTCCTCCGCTTGCTCTCCCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT-CTAGGTTTCCATGTGG-AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT-ATGGGGGTGCTTGGTAGA-ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTAGAATTTCGCTATGTGAAATCAACGCAAACACTGTGAAAACTTGTTGGTTGATGCAACTTCTGATCTTCCCTAGATTCCCAAGTCATAGTGTACATGGCATGCCTTGGAAGCTCATGGCATGTTCCATTTTGTCATTAGATTAGAACAATGAAAGGAAGTTAGGAACATGCCATTTTGCATATAGATGTGTCAGTCAAGACAGCAGAGCAAGGAAAGTATATATTGGGCTATTGGCACTTCATCTGGTAAGGCATAAAGCTTTTGCCTTTGCCGCGAAGCTGCCTTATTGTCTTTTCCACTTTCCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK066349             [GGCCGCTCCTCCGCTTGCTCTCCCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT ATGGGGGTGCTTGGTAGA ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTA                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB682078             [               TGCTCTCTCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTTTCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGT ATGGGGGTGCTTGGTAGA ATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACAC                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSC29171             [                  TCTCCCTTGCTTCCGAGGGCTCCG CGCACGGGGTCGTCGCGGCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGCCGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCAG GGAGCAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTNGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTNAGGTGTACGCCCAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU069132             [                                                                                                                                    GGGTTGCGGGGGCGATNGCCATGGCCGCGGCGGAGGCGCGGGTGCGGCAGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGAACACCATCGCGCA NGGNACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAAGGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTGGCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTGGT CTAGGTTTCCATGTGG AATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU069131             [                                                                                                                                                                                                                                                                                                                                                                                                                                   GGTCCTAGGTTNCCATGTGGAAATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAGAATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGCAGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGTGAAAGTTGGCAATGCAATCGTNATGGGGGTGCTTGGTAGACATGACTTGTGCTTTTGCTTTTCTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCAAAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGTAGAATTTCGCTATGTGAAATCAACGCAAACACTGTGAAAACTTGTTGGTTGATGCAACTTCTGATCTTCCCTAGATTCCCAAGTCATAGTGTACATGGCATGCCTTGGAAGCTCATGGCATGTTCCATTTTGTCATTAGATTAGAACAATGAAAGGAAGTTAGGAACATGCCATTTTGCATATAGATGTGTCAGTCAAGACAGCAGAGCAAGGAAAGTATATATTGGGCTATTGGCACTTCATCTGGTAAGGCATAAAGCTTTTGCCTTTGCCGCGAAGCTGCCTTATTGTCTTTTCCACTTTCCAAAAAAAAAAAAAAAAAA]


>consensus_7609#0 GGCCGCTCCTCCGCTTGCTCTCCCTTGCTTCCGAGGGCTCCGCCGCACGGGGTCGTCGCG GCTAGAGGGTGGGCTCGCCGTCGAGGAAGGCGGGGGTGTCTGGCTCATCGAGAACAGTGC CGAGGGGAATCCGGGTTGCGGGGGCGATGGCCATGGCCGCGGCGGAGGCGCGGGTGCGGC AGGAGAAGGTGAAGAAGTTCGAGGACTTCGTCGACCGGAGACTGAAGCCGGACCTTGTGA ACACCATCGCGCAGCGGGACAAGGTGTTCCAGCAGCAGAAGACCTTCTTGGACTTGAAAA GGAACATCGAAAATTTGGAGAAGAATGGAGTCACCAGTATGCGATCCATGGTCAATCTTG GCTCTGAGGTGTACGCCCAGGCAGAAGTGCCAGATACAAGACACATTTTTGTGGATATTG GTCTAGGTTTCCATGTGGAATTTACTTGGCAGGAAGCTTTGCAGTTTATATCTGTAAGAG AATCAAGGTTGGCAAGACAGATAGATGAGTACACTCATCTCATCGCAAGCATAAAAGCGC AGATCAAGTTGGTATGTGAAGGTATCCGCGAACTACTCGAGCTACCAGCAGAGTAAAGGT GAAAGTTGGCAATGCAATCGTATGGGGGTGCTTGGTAGAATGACTTGTGCTTTTGCTTTT CTCACGAAGGCATGGTCGCCCATCTTCGAACATGAAAGATTTTACATGTACTGTTGTGCA AAAGATGGTTTCATACACTCATCCCTGTAATAACATTCATCTAATCAGATTAACTACAGT AGAATTTCGCTATGTGAAATCAACGCAAACACTGTGAAAACTTGTTGGTTGATGCAACTT CTGATCTTCCCTAGATTCCCAAGTCATAGTGTACATGGCATGCCTTGGAAGCTCATGGCA TGTTCCATTTTGTCATTAGATTAGAACAATGAAAGGAAGTTAGGAACATGCCATTTTGCA TATAGATGTGTCAGTCAAGACAGCAGAGCAAGGAAAGTATATATTGGGCTATTGGCACTT CATCTGGTAAGGCATAAAGCTTTTGCCTTTGCCGCGAAGCTGCCTTATTGTCTTTTCCAC TTTCCAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)