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Oryza sativa
cluster # 7613 cluster # 7613       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7613#0 length = 1862 sequences # 1  
consensus_7613#1 length = 1712 sequences # 4  

consensusID : consensus_7613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1862
fasta sequence
                              [ACCCATTAACGACATGGGCTCTCCACGTTCAGCCATGGCCGCCGTGAACATACACTAATCCGGCCGTCGCCTCCACCAGCTGCCGGTGGCGGCGCCGCCGGGCGCCGGTGTCAAGATGCCGGAGAAGGGCACCGTGGTGATGAGCCGGTACGAGCTCGGCCGCTCGCTGGGGCACGGCACGTTCTCCAAGGTGTACCAGGCCAGGAGCCTCGTGTCCGGCGAGACCGTCGCCGTGAAGGTGATCGACAAGGAGAAGGCGCTGCGCGCCGGCGCCGGCATGGTCGACCAGATCGAGCGCGAGGTCGCCGTCATGCGGCTCGTCGGCCGCCACCCCAACGTGGTCCGCCTCCACGAGGTGATGGCCAGCAGGAGCAAGATCTACTTCGTCATGGAGCTCGTCCGCGGCGGCGAGCTCCTCGCCAGGCTGGTCGCCGGCGGCGGCCGCCTCGGGGAGGACGCGGCGAGGAGGTACTTCCACCAGCTCGTCGCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCGTCGACGACGACGGCAGCGGCGGCGGCGGCAACCTCAAGGTCACCGACTTCGGGCTCAGCGCGCTCAGCGCGTCGCGGCGGCACGACGGCCTCCTCCACACGACGTGCGGCACGCCGTCGTACGTCGCGCCGGAGATCATCGGCGACAAGGGCTACGACGGGGCCACCGCCGACGTCTGGTCCTGCGGCGTCATCCTCTTCCTCCTCCTCGCCGGCTACCTCCCGTTCTTCGATTCCAACCTCATGGAGATGTACAAGAAGATCACCAATGGCGAGTTCAAGGTCCCCGACTGGTTCACCCCCGACGCACGCAGCCTCATCTCCAGACTCCTCGACCCAAACCCTACAACTCGCATCACCATCGACGAGCTCGTCAAGCATCCATGGTTCAAGAAGGGACACACCAAGCGGCCGGCAAGCTCGAACACCATGAAACTCAACGAGGAGGAGAAACCAGCGAACGCCGCCATGAACATGAAGCCGGCGAGCTTGAACGCGTTCGACATCATCTCGCTCTCGCAGGGATTCGACCTGTCAGGGATGTTCTGCTGCCATGGCCACAGCAGCAGGACGCAGGATCAGCTGTTCGTCACCGGGAAGCCGGCGACGGCGATCGTGTCGAGGCTGGAGGAGATCGCGGAGACGGAGCACTTCACGGTGAAGAAGAAGCAGAAGAAGAGGCAAGAAGAGGACGGGATGGCGGTGAAGCTGCAGGGGTGGAAGGAAGGGAGGAAAGGGCAGCTCGCCATTGACGCCGAGATCTTCGAGGTTTCGCCGTCGTGCTACGTCGTCGAGGTGAAGAAAACGGCCGGCGACACGCTGGAGTACCAGGCGTTCTGCAACAGAGACCTCAGGCCGTCGCTGAACGACATCTGCTGGACCTCGCCGGCGACAGCAGCGTCGGAGAAGAACCAGCTGCCGGCAGTGTCGGAGGTGTCGCCACTGAGTAGTCCTCGGAATTGATGTGACAGATTATCTAGGTGCAGTGGCAGATATTGATCATCAGATATGTGCTGTTTCCCTTGTTGTTTCCTTTGCTTTGAATTGTTGTTTTGATTTTTTTTTTATTCTTGTTTGTGTTTCATAATGATCTTGGGGGTAGTGGTCTGGTATTTCCAAGTTCAAGATGAATTTCAATTATTGTTTTTTTCTGTTCTTTTGTTGTGTGGTGGACTGGTGGTTTAGTGTTGATTGTTGGACATAGGTGATAGAATGTGTTCTCCTTTTGCTTAAATTGCATGGTCCATTTGTAAGGTAAATTAATGGCATCACACCACCATAATATCCAATTTATGAATGTTTTAGAAAT]

[+] EMBL AK107068             [ACCCATTAACGACATGGGCTCTCCACGTTCAGCCATGGCCGCCGTGAACATACACTAATCCGGCCGTCGCCTCCACCAGCTGCCGGTGGCGGCGCCGCCGGGCGCCGGTGTCAAGATGCCGGAGAAGGGCACCGTGGTGATGAGCCGGTACGAGCTCGGCCGCTCGCTGGGGCACGGCACGTTCTCCAAGGTGTACCAGGCCAGGAGCCTCGTGTCCGGCGAGACCGTCGCCGTGAAGGTGATCGACAAGGAGAAGGCGCTGCGCGCCGGCGCCGGCATGGTCGACCAGATCGAGCGCGAGGTCGCCGTCATGCGGCTCGTCGGCCGCCACCCCAACGTGGTCCGCCTCCACGAGGTGATGGCCAGCAGGAGCAAGATCTACTTCGTCATGGAGCTCGTCCGCGGCGGCGAGCTCCTCGCCAGGCTGGTCGCCGGCGGCGGCCGCCTCGGGGAGGACGCGGCGAGGAGGTACTTCCACCAGCTCGTCGCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCGTCGACGACGACGGCAGCGGCGGCGGCGGCAACCTCAAGGTCACCGACTTCGGGCTCAGCGCGCTCAGCGCGTCGCGGCGGCACGACGGCCTCCTCCACACGACGTGCGGCACGCCGTCGTACGTCGCGCCGGAGATCATCGGCGACAAGGGCTACGACGGGGCCACCGCCGACGTCTGGTCCTGCGGCGTCATCCTCTTCCTCCTCCTCGCCGGCTACCTCCCGTTCTTCGATTCCAACCTCATGGAGATGTACAAGAAGATCACCAATGGCGAGTTCAAGGTCCCCGACTGGTTCACCCCCGACGCACGCAGCCTCATCTCCAGACTCCTCGACCCAAACCCTACAACTCGCATCACCATCGACGAGCTCGTCAAGCATCCATGGTTCAAGAAGGGACACACCAAGCGGCCGGCAAGCTCGAACACCATGAAACTCAACGAGGAGGAGAAACCAGCGAACGCCGCCATGAACATGAAGCCGGCGAGCTTGAACGCGTTCGACATCATCTCGCTCTCGCAGGGATTCGACCTGTCAGGGATGTTCTGCTGCCATGGCCACAGCAGCAGGACGCAGGATCAGCTGTTCGTCACCGGGAAGCCGGCGACGGCGATCGTGTCGAGGCTGGAGGAGATCGCGGAGACGGAGCACTTCACGGTGAAGAAGAAGCAGAAGAAGAGGCAAGAAGAGGACGGGATGGCGGTGAAGCTGCAGGGGTGGAAGGAAGGGAGGAAAGGGCAGCTCGCCATTGACGCCGAGATCTTCGAGGTTTCGCCGTCGTGCTACGTCGTCGAGGTGAAGAAAACGGCCGGCGACACGCTGGAGTACCAGGCGTTCTGCAACAGAGACCTCAGGCCGTCGCTGAACGACATCTGCTGGACCTCGCCGGCGACAGCAGCGTCGGAGAAGAACCAGCTGCCGGCAGTGTCGGAGGTGTCGCCACTGAGTAGTCCTCGGAATTGATGTGACAGATTATCTAGGTGCAGTGGCAGATATTGATCATCAGATATGTGCTGTTTCCCTTGTTGTTTCCTTTGCTTTGAATTGTTGTTTTGATTTTTTTTTTATTCTTGTTTGTGTTTCATAATGATCTTGGGGGTAGTGGTCTGGTATTTCCAAGTTCAAGATGAATTTCAATTATTGTTTTTTTCTGTTCTTTTGTTGTGTGGTGGACTGGTGGTTTAGTGTTGATTGTTGGACATAGGTGATAGAATGTGTTCTCCTTTTGCTTAAATTGCATGGTCCATTTGTAAGGTAAATTAATGGCATCACACCACCATAATATCCAATTTATGAATGTTTTAGAAAT]


>consensus_7613#0 ACCCATTAACGACATGGGCTCTCCACGTTCAGCCATGGCCGCCGTGAACATACACTAATC CGGCCGTCGCCTCCACCAGCTGCCGGTGGCGGCGCCGCCGGGCGCCGGTGTCAAGATGCC GGAGAAGGGCACCGTGGTGATGAGCCGGTACGAGCTCGGCCGCTCGCTGGGGCACGGCAC GTTCTCCAAGGTGTACCAGGCCAGGAGCCTCGTGTCCGGCGAGACCGTCGCCGTGAAGGT GATCGACAAGGAGAAGGCGCTGCGCGCCGGCGCCGGCATGGTCGACCAGATCGAGCGCGA GGTCGCCGTCATGCGGCTCGTCGGCCGCCACCCCAACGTGGTCCGCCTCCACGAGGTGAT GGCCAGCAGGAGCAAGATCTACTTCGTCATGGAGCTCGTCCGCGGCGGCGAGCTCCTCGC CAGGCTGGTCGCCGGCGGCGGCCGCCTCGGGGAGGACGCGGCGAGGAGGTACTTCCACCA GCTCGTCGCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCC GGAGAACCTCCTCGTCGACGACGACGGCAGCGGCGGCGGCGGCAACCTCAAGGTCACCGA CTTCGGGCTCAGCGCGCTCAGCGCGTCGCGGCGGCACGACGGCCTCCTCCACACGACGTG CGGCACGCCGTCGTACGTCGCGCCGGAGATCATCGGCGACAAGGGCTACGACGGGGCCAC CGCCGACGTCTGGTCCTGCGGCGTCATCCTCTTCCTCCTCCTCGCCGGCTACCTCCCGTT CTTCGATTCCAACCTCATGGAGATGTACAAGAAGATCACCAATGGCGAGTTCAAGGTCCC CGACTGGTTCACCCCCGACGCACGCAGCCTCATCTCCAGACTCCTCGACCCAAACCCTAC AACTCGCATCACCATCGACGAGCTCGTCAAGCATCCATGGTTCAAGAAGGGACACACCAA GCGGCCGGCAAGCTCGAACACCATGAAACTCAACGAGGAGGAGAAACCAGCGAACGCCGC CATGAACATGAAGCCGGCGAGCTTGAACGCGTTCGACATCATCTCGCTCTCGCAGGGATT CGACCTGTCAGGGATGTTCTGCTGCCATGGCCACAGCAGCAGGACGCAGGATCAGCTGTT CGTCACCGGGAAGCCGGCGACGGCGATCGTGTCGAGGCTGGAGGAGATCGCGGAGACGGA GCACTTCACGGTGAAGAAGAAGCAGAAGAAGAGGCAAGAAGAGGACGGGATGGCGGTGAA GCTGCAGGGGTGGAAGGAAGGGAGGAAAGGGCAGCTCGCCATTGACGCCGAGATCTTCGA GGTTTCGCCGTCGTGCTACGTCGTCGAGGTGAAGAAAACGGCCGGCGACACGCTGGAGTA CCAGGCGTTCTGCAACAGAGACCTCAGGCCGTCGCTGAACGACATCTGCTGGACCTCGCC GGCGACAGCAGCGTCGGAGAAGAACCAGCTGCCGGCAGTGTCGGAGGTGTCGCCACTGAG TAGTCCTCGGAATTGATGTGACAGATTATCTAGGTGCAGTGGCAGATATTGATCATCAGA TATGTGCTGTTTCCCTTGTTGTTTCCTTTGCTTTGAATTGTTGTTTTGATTTTTTTTTTA TTCTTGTTTGTGTTTCATAATGATCTTGGGGGTAGTGGTCTGGTATTTCCAAGTTCAAGA TGAATTTCAATTATTGTTTTTTTCTGTTCTTTTGTTGTGTGGTGGACTGGTGGTTTAGTG TTGATTGTTGGACATAGGTGATAGAATGTGTTCTCCTTTTGCTTAAATTGCATGGTCCAT TTGTAAGGTAAATTAATGGCATCACACCACCATAATATCCAATTTATGAATGTTTTAGAA AT



consensusID : consensus_7613#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1712
fasta sequence
                              [ACCGTCTCCATCTGTGCACGGAGGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGCCGGAACGGCGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCCATGGAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTCCTCGGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCCGTCGCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCGGCACGGTGGAGCAGGTGAAGCGCGAGGTGGACGTCATGCGGCGTGTGCACCACCGCCACGT-CA-TCC-GCCTCCACGAGGTGATGGCTACGCGGTCCAGGATCTACTTCGTCATGGAGTACGCGAGCGGCGGCGAGCTCTTCACCCGCCTCTCCCGGAGCCCGCGGTTCCCGGAGCCCGTCGCGCGCCGCTACTTCCAGCAGCTGATCACCGCCGTGGAGTTCTGCCACAGCCGCGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTCCTCCTCGACGCCCGCGGCGACCTCAAGGTCACCGACTTCGGCCTCAGCGCGCTAGACGGAGGCCTCCGCGGCGACGGCCTCTTGCACACCACGTGCGGCACGCCGGCGTACGTCGCTCCCGAGGTGCTCCTGAAGCGTGGCTACGACGGCGCCAAGGCGGACATCTGGTCGTGCGGCGTGATCCTTTTCGTGCTCCTCGCCGGCTACCTCCCCTTCAACGAAACCAACCTCGTGATCCTGTACCGGAATATCACGGAGAGCAACTACAGGTGCCCGCCGTGGTTCTCCGTCGAGGCGCGCAAGCTCCTTGCCAGGCTGCTCGACCCGAACCCCAAGACCCGGATCACCATCTCCAAGATCATGGACAGGCCATGGTTCCAGCAGGCGACGTGCCCGCTCGGCGACATGTCCCTCGTCGCGAGCGCGCCCTCGGTGCTGCTTGCCAGAAAGGAAGCCAGCCAGCAGCACGACGACGAGGAGGACGATGGGTTTGCACGGGAGAAGAAGAAGCGGTCCAATGTGATCATGTCGTCGCCGGTGATCGACGTGAGGCCCTCGAGCATGAACGCCTTCGACATCATCTCGCGGTCGAGAGGGCTGGACCTGTCCAAGATGTTCGACGCGGAGGAGCGCAGGTCGGAGGCGCGGTTCTCCACCAGGGAGACCACGACGGCGATCGTCTCCAAGCTGGAGGAGATCGCGGAGGCGGGGAGGTTCAGCTTCAAGCTGAAGGAGAAAGGGAGGGTCGAGCTGGAGGGGAGCCAGGACGGGCGGAAGGGCGCGCTGGCCATCGAGGCGGAGATCTTCAAGGTGGCGCCGGAGGTGCACGTGGTGGAGGTGAGGAAGACCGGCGGCGACTCACCGGATTTCCGGGACTTCTACAAGCAGGAGCTTAAGCCGTCGCTTGGCGACATGGTGTGGGCGTGGCAGGGAGGTGATTCGCCGCCGCTCGTGCCGGCGGCGGGGAGGAGGCCGATCACGAAGCGCTCTTGATATGCCGACTCGATATCGAATTTTCACGTTGTAATTGATATGCTCTCTGCTTATTGATCTCTCGTACGTGTTTGTGAAGGGTGATGGGTGAACCACCGTCCAGCTGATCTGTGAGTTTTTAAAAGCACGAATTACATNNNTNTTGGCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100202             [ACCGTCTCCATCTGTGCACGGAGGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGCCGGAACGGCGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCCATGGAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTCCTCGGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCCGTCGCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCGGCACGGTGGAGCAGGTGAAGCGCGAGGTGGACGTCATGCGGCGTGTGCACCACCGCCACGT CA TCC GCCTCCACGAGGTGATGGCTACGCGGTCCAGGATCTACTTCGTCATGGAGTACGCGAGCGGCGGCGAGCTCTTCACCCGCCTCTCCCGGAGCCCGCGGTTCCCGGAGCCCGTCGCGCGCCGCTACTTCCAGCAGCTGATCACCGCCGTGGAGTTCTGCCACAGCCGCGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTCCTCCTCGACGCCCGCGGCGACCTCAAGGTCACCGACTTCGGCCTCAGCGCGCTAGACGGAGGCCTCCGCGGCGACGGCCTCTTGCACACCACGTGCGGCACGCCGGCGTACGTCGCTCCCGAGGTGCTCCTGAAGCGTGGCTACGACGGCGCCAAGGCGGACATCTGGTCGTGCGGCGTGATCCTTTTCGTGCTCCTCGCCGGCTACCTCCCCTTCAACGAAACCAACCTCGTGATCCTGTACCGGAATATCACGGAGAGCAACTACAGGTGCCCGCCGTGGTTCTCCGTCGAGGCGCGCAAGCTCCTTGCCAGGCTGCTCGACCCGAACCCCAAGACCCGGATCACCATCTCCAAGATCATGGACAGGCCATGGTTCCAGCAGGCGACGTGCCCGCTCGGCGACATGTCCCTCGTCGCGAGCGCGCCCTCGGTGCTGCTTGCCAGAAAGGAAGCCAGCCAGCAGCACGACGACGAGGAGGACGATGGGTTTGCACGGGAGAAGAAGAAGCGGTCCAATGTGATCATGTCGTCGCCGGTGATCGACGTGAGGCCCTCGAGCATGAACGCCTTCGACATCATCTCGCGGTCGAGAGGGCTGGACCTGTCCAAGATGTTCGACGCGGAGGAGCGCAGGTCGGAGGCGCGGTTCTCCACCAGGGAGACCACGACGGCGATCGTCTCCAAGCTGGAGGAGATCGCGGAGGCGGGGAGGTTCAGCTTCAAGCTGAAGGAGAAAGGGAGGGTCGAGCTGGAGGGGAGCCAGGACGGGCGGAAGGGCGCGCTGGCCATCGAGGCGGAGATCTTCAAGGTGGCGCCGGAGGTGCACGTGGTGGAGGTGAGGAAGACCGGCGGCGACTCACCGGATTTCCGGGACTTCTACAAGCAGGAGCTTAAGCCGTCGCTTGGCGACATGGTGTGGGCGTGGCAGGGAGGTGATTCGCCGCCGCTCGTGCCGGCGGCGGGGAGGAGGCCGATCACGAAGCGCTCTTGATATGCCGACTCGATATCGAATTTTCACGTTGTAATTGATATGCTCTCTGCTTATTGATCTCTCGTAC                                                                                                       ]
[+] EMBL AK069231             [        CATCTGTGCACGGAGGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGCCGGAACGGCGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCCATGGAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTCCTCGGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCCGTCGCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCGGCACGGTGGAGCAGGTGAAGCGCGAGGTGGACGTCATGCGGCGTGTGCACCACCGCCACGT CA TCC GCCTCCACGAGGTGATGGCTACGCGGTCCAGGATCTACTTCGTCATGGAGTACGCGAGCGGCGGCGAGCTCTTCACCCGCCTCTCCCGGAGCCCGCGGTTCCCGGAGCCCGTCGCGCGCCGCTACTTCCAGCAGCTGATCACCGCCGTGGAGTTCTGCCACAGCCGCGGCGTGTACCACCGCGACCTCAAGCCCGAGAACCTCCTCCTCGACGCCCGCGGCGACCTCAAGGTCACCGACTTCGGCCTCAGCGCGCTAGACGGAGGCCTCCGCGGCGACGGCCTCTTGCACACCACGTGCGGCACGCCGGCGTACGTCGCTCCCGAGGTGCTCCTGAAGCGTGGCTACGACGGCGCCAAGGCGGACATCTGGTCGTGCGGCGTGATCCTTTTCGTGCTCCTCGCCGGCTACCTCCCCTTCAACGAAACCAACCTCGTGATCCTGTACCGGAATATCACGGAGAGCAACTACAGGTGCCCGCCGTGGTTCTCCGTCGAGGCGCGCAAGCTCCTTGCCAGGCTGCTCGACCCGAACCCCAAGACCCGGATCACCATCTCCAAGATCATGGACAGGCCATGGTTCCAGCAGGCGACGTGCCCGCTCGGCGACATGTCCCTCGTCGCGAGCGCGCCCTCGGTGCTGCTTGCCAGAAAGGAAGCCAGCCAGCAGCACGACGACGAGGAGGACGATGGGTTTGCACGGGAGAAGAAGAAGCGGTCCAATGTGATCATGTCGTCGCCGGTGATCGACGTGAGGCCCTCGAGCATGAACGCCTTCGACATCATCTCGCGGTCGAGAGGGCTGGACCTGTCCAAGATGTTCGACGCGGAGGAGCGCAGGTCGGAGGCGCGGTTCTCCACCAGGGAGACCACGACGGCGATCGTCTCCAAGCTGGAGGAGATCGCGGAGGCGGGGAGGTTCAGCTTCAAGCTGAAGGAGAAAGGGAGGGTCGAGCTGGAGGGGAGCCAGGACGGGCGGAAGGGCGCGCTGGCCATCGAGGCGGAGATCTTCAAGGTGGCGCCGGAGGTGCACGTGGTGGAGGTGAGGAAGACCGGCGGCGACTCACCGGATTTCCGGGACTTCTACAAGCAGGAGCTTAAGCCGTCGCTTGGCGACATGGTGTGGGCGTGGCAGGGAGGTGATTCGCCGCCGCTCGTGCCGGCGGCGGGGAGGAGGCCGATCACGAAGCGCTCTTGATATGCCGACTCGATATCGAATTTTCACGTTGTAATTGATATGCTCTCTGCTTATTGATCTCTCGTACGTGTTTGTGAAGGGTGATGGGTGAACCACCGTCCAGCTGATCTGTGAGTTTTTAAAAGCACGAATTACAT                                 ]
[+] EMBL C22494               [                      GGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGCCGGAACGGGGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCCATGGAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTCCTCGGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCCGTCGCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCGGCACGGTGGAGCAGGTGAAGCGCGAGGTGGACGTCATGCGGCGTGTGCACCACCGCCANGTNCATTCCGGGCTCCACGAGGTGATGGNTAAGCGGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C22495               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCGACATGGTNTGGGCGTGGCAGGGAGGTGATTCGCCGCCGCTCGTGCCGGCGGCGGGGAGGAGGCCGATCACGAAGCGCTCTTGATATGCCGACTCGATATCGAATTTTCACGTTGTAATTGATATGCTCTCTGCTTATTGATCTCTCGTACGTGTTTGTGAAGGGTGATGGGTGAACCNCCGTCCAGCTGATCTGTGNGTTTTTAAAAGCACGNATTACANNNNTNTTGGCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7613#1 ACCGTCTCCATCTGTGCACGGAGGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGCC GGAACGGCGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCCATG GAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTCCTC GGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCCGTC GCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCGGCACGGTGGAGCAGGTGAAG CGCGAGGTGGACGTCATGCGGCGTGTGCACCACCGCCACGTCATCCGCCTCCACGAGGTG ATGGCTACGCGGTCCAGGATCTACTTCGTCATGGAGTACGCGAGCGGCGGCGAGCTCTTC ACCCGCCTCTCCCGGAGCCCGCGGTTCCCGGAGCCCGTCGCGCGCCGCTACTTCCAGCAG CTGATCACCGCCGTGGAGTTCTGCCACAGCCGCGGCGTGTACCACCGCGACCTCAAGCCC GAGAACCTCCTCCTCGACGCCCGCGGCGACCTCAAGGTCACCGACTTCGGCCTCAGCGCG CTAGACGGAGGCCTCCGCGGCGACGGCCTCTTGCACACCACGTGCGGCACGCCGGCGTAC GTCGCTCCCGAGGTGCTCCTGAAGCGTGGCTACGACGGCGCCAAGGCGGACATCTGGTCG TGCGGCGTGATCCTTTTCGTGCTCCTCGCCGGCTACCTCCCCTTCAACGAAACCAACCTC GTGATCCTGTACCGGAATATCACGGAGAGCAACTACAGGTGCCCGCCGTGGTTCTCCGTC GAGGCGCGCAAGCTCCTTGCCAGGCTGCTCGACCCGAACCCCAAGACCCGGATCACCATC TCCAAGATCATGGACAGGCCATGGTTCCAGCAGGCGACGTGCCCGCTCGGCGACATGTCC CTCGTCGCGAGCGCGCCCTCGGTGCTGCTTGCCAGAAAGGAAGCCAGCCAGCAGCACGAC GACGAGGAGGACGATGGGTTTGCACGGGAGAAGAAGAAGCGGTCCAATGTGATCATGTCG TCGCCGGTGATCGACGTGAGGCCCTCGAGCATGAACGCCTTCGACATCATCTCGCGGTCG AGAGGGCTGGACCTGTCCAAGATGTTCGACGCGGAGGAGCGCAGGTCGGAGGCGCGGTTC TCCACCAGGGAGACCACGACGGCGATCGTCTCCAAGCTGGAGGAGATCGCGGAGGCGGGG AGGTTCAGCTTCAAGCTGAAGGAGAAAGGGAGGGTCGAGCTGGAGGGGAGCCAGGACGGG CGGAAGGGCGCGCTGGCCATCGAGGCGGAGATCTTCAAGGTGGCGCCGGAGGTGCACGTG GTGGAGGTGAGGAAGACCGGCGGCGACTCACCGGATTTCCGGGACTTCTACAAGCAGGAG CTTAAGCCGTCGCTTGGCGACATGGTGTGGGCGTGGCAGGGAGGTGATTCGCCGCCGCTC GTGCCGGCGGCGGGGAGGAGGCCGATCACGAAGCGCTCTTGATATGCCGACTCGATATCG AATTTTCACGTTGTAATTGATATGCTCTCTGCTTATTGATCTCTCGTACGTGTTTGTGAA GGGTGATGGGTGAACCACCGTCCAGCTGATCTGTGAGTTTTTAAAAGCACGAATTACATN NNTNTTGGCAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7613#0      ---------ACCCATTAACGACATGGGCTCTCCA--CGTTCAGCCATGGCCGCCGTGAAC 49
consensus_7613#1      ACCGTCTCCATCTGTGCACGG-AGGGATTCATTGTCCCTCCGGCCAATTTCCCGGCCGGC 59
                               * *  *  ***  * **  **      * * * ****    * * *    *

consensus_7613#0      ATACACTAATCCGGCCGTCGCCTCCACCAGCTGCCGGTGGCGGCGCCGCCGGGCGCCGGT 109
consensus_7613#1      CGGAAC--GGCGGAACCTCGCCCATGATCACTTGAAACACCTCCCTTGCTCTTCATGGCC 117
                          **    * *  * *****        **        *  *   **    *   *  

consensus_7613#0      GTCAAGATGCCGGAGAAGGGCACC---GTGGTGATGAGCCGGTACGAGCTCGGCCGCTCG 166
consensus_7613#1      ATGGAGACGACGAGCCAAGATTCGCAGGTGATCATGGGGCGGTACAAGCTCGGCCGGCTC 177
                       *  *** * **    * *   *    *** * *** * ****** **********    

consensus_7613#0      CTGGGGCACGGCACGTTCTCCAAGGTGTACCAGGCCAGGAGCCTCGTGTCCGGCGAGACC 226
consensus_7613#1      CTCGGCCGTGGCACGTTCGCCAAGGTCTACAAGGCCTATAAGTTGGCCACCGGCGAGGCC 237
                      ** ** *  ********* ******* *** *****   *   * *   ******** **

consensus_7613#0      GTCGCCGTGAAGGTGATCGACAAGGAGAAGGCGCTGCGCGCCGGCGCCGGCATGGTCGAC 286
consensus_7613#1      GTCGCCATCAAGGTGTTCGACAAGGAGGCGGTGCAGCGGTCCG------GCACGGTGGAG 291
                      ****** * ****** ***********  ** ** ***  ***      *** *** ** 

consensus_7613#0      CAGATCGAGCGCGAGGTCGCCGTCATGCGGCTCGTCGGCCGCCACCCCAACGTGGTCCGC 346
consensus_7613#1      CAGGTGAAGCGCGAGGTGGACGTCATGCGGCGTGTG---CACCACCGCCACGTCATCCGC 348
                      *** *  ********** * ***********  **    * ***** * ****  *****

consensus_7613#0      CTCCACGAGGTGATGGCCAGCAGGAGCAAGATCTACTTCGTCATGGAGCTCGTCCGCGGC 406
consensus_7613#1      CTCCACGAGGTGATGGCTACGCGGTCCAGGATCTACTTCGTCATGGAGTACGCGAGCGGC 408
                      ***************** *   **  ** *******************  **   *****

consensus_7613#0      GGCGAGCTCCTCGCCAGGCTGGTCGCCGGCGGCGGCCGCCTCGGGGAGGACGCGGCGAGG 466
consensus_7613#1      GGCGAGCTCTTCACCCGCCT---CTCCCGGAGCCCGCGGTTCCCGGAGCCCGTCGCGCGC 465
                      ********* ** ** * **   * ** *  **   **  **  ****  **  *** * 

consensus_7613#0      AGGTACTTCCACCAGCTCGTCGCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCAC 526
consensus_7613#1      CGCTACTTCCAGCAGCTGATCACCGCCGTGGAGTTCTGCCACAGCCGCGGCGTGTACCAC 525
                       * ******** *****  ** ******* ** ******************** ******

consensus_7613#0      CGCGACCTCAAGCCGGAGAACCTCCTCGTCGACGACGACGGCAGCGGCGGCGGCGGCAAC 586
consensus_7613#1      CGCGACCTCAAGCCCGAGAACCTCCTCCTCGACGCCC---------------GCGGCGAC 570
                      ************** ************ ****** *                ***** **

consensus_7613#0      CTCAAGGTCACCGACTTCGGGCTCAGCGCGCTCAGCGCGTCGCGGCGGCACGACGGCCTC 646
consensus_7613#1      CTCAAGGTCACCGACTTCGGCCTCAGCGCGCTAGACGGAGGCCTCCGCGGCGACGGCCTC 630
                      ******************** ***********   **     *  **   **********

consensus_7613#0      CTCCACACGACGTGCGGCACGCCGTCGTACGTCGCGCCGGAGATCATCGGCGACAAGGGC 706
consensus_7613#1      TTGCACACCACGTGCGGCACGCCGGCGTACGTCGCTCCCGAGGTGCTCCTGAAGCGTGGC 690
                       * ***** *************** ********** ** *** *  **    *    ***

consensus_7613#0      TACGACGGGGCCACCGCCGACGTCTGGTCCTGCGGCGTCATCCTCTTCCTCCTCCTCGCC 766
consensus_7613#1      TACGACGGCGCCAAGGCGGACATCTGGTCGTGCGGCGTGATCCTTTTCGTGCTCCTCGCC 750
                      ******** ****  ** *** ******* ******** ***** *** * *********

consensus_7613#0      GGCTACCTCCCGTTCTTCGATTCCAACCTCATGGAGATGTACAAGAAGATCACCAATGGC 826
consensus_7613#1      GGCTACCTCCCCTTCAACGAAACCAACCTCGTGATCCTGTACCGGAATATCACGGAGAGC 810
                      *********** ***  ***  ******** **    *****  *** *****  *  **

consensus_7613#0      GAGTTCAAGGTCCCCGACTGGTTCACCCCCGACGCACGCAGCCTCATCTCCAGACTCCTC 886
consensus_7613#1      AACTACAGGTGCCCGCCGTGGTTCTCCGTCGAGGCGCGCAAGCTCCTTGCCAGGCTGCTC 870
                       * * ** *  ***    ****** **  *** ** ****  *** *  **** ** ***

consensus_7613#0      GACCCAAACCCTACAACTCGCATCACCATCGACGAGCTCGTCAAGCATCCATGGTTCAAG 946
consensus_7613#1      GACCCGAACCCCAAGACCCGGATCACCATCTCCAAGATCATGGACAGGCCATGGTTCCAG 930
                      ***** ***** *  ** ** *********  * ** ** *  *    ********* **

consensus_7613#0      AAGG-GACACACCAAGCGGCCGGCAAGCTC--------GAACAC---CATGAAACTCAAC 994
consensus_7613#1      CAGGCGACGTGCCCGCTCGGCGACATGTCCCTCGTCGCGAGCGCGCCCTCGGTGCTGCTT 990
                       *** ***   **     * ** ** *  *        ** * *   *  *   **    

consensus_7613#0      GA-GGAGGAGAAACCAGCGAACGCCGCCATGAACATGAAGCCGGCGAGCTTGAACGCG-- 1051
consensus_7613#1      GCCAGAAAGGAAGCCAGCCAGCAGCACGACGACGAGGAGGACGATGGGTTTGCACGGGAG 1050
                      *   **   *** ***** * *  * * * **  * ** * **  * * *** *** *  

consensus_7613#0      ------------TTCGACATCATCTCGCTCTCGCAGGGATTCGACCTG------TCAGGG 1093
consensus_7613#1      AAGAAGAAGCGGTCCAATGTGATCATGTCGTCGCCGGTGATCGACGTGAGGCCCTCGAGC 1110
                                  * * *  * ***  *   **** **   ***** **      **  * 

consensus_7613#0      ATGTTCTGCTGCCATGGCCACA-GCAGC--AGGACGCAGGATC------AGCTGTTCGTC 1144
consensus_7613#1      ATGAACGCCTTCGACATCATCTCGCGGTCGAGAGGGCTGGACCTGTCCAAGATGTTCGAC 1170
                      ***  *  ** * *   *  *  ** *   **   ** *** *      ** ****** *

consensus_7613#0      ACCGGGAAGCCGGCGACGGCGATCGTGTCGAGGCTGGAGGAGATCGCGGAGACGGAGCAC 1204
consensus_7613#1      GCGGAGGAGCGCAGGTCGGAGGCGCGGTTCTCCACCAGGGAGACCACGACGGCGATCGTC 1230
                       * * * ***    * *** *     **          ***** * **  * **     *

consensus_7613#0      TTCACGGTGAAGAAGAA-GCAGAAGAAGAGG----------CAAGAAGAGGACGGGATGG 1253
consensus_7613#1      TCCAAGCTGGAGGAGATCGCGGAGGCGGGGAGGTTCAGCTTCAAGCTGAAGGAGAAAGGG 1290
                      * ** * ** ** ***  ** ** *  * *           ****  ** *  *  * **

consensus_7613#0      CGG-TGAAGCTGCAGGGGTGGAAGGAAGGGAGGAAAGGGCAGCTCGCCATTGACGCCGAG 1312
consensus_7613#1      AGGGTCGAGCTGGAGGGGAGCCAGGACGGGCGGAAGGGCGCGCTGGCCATCGAGGCGGAG 1350
                       ** *  ***** ***** *  **** *** **** **   *** ***** ** ** ***

consensus_7613#0      ATCTTCGAGGTTTCGCCGTCGTGCTACGTCGTCGAGGTGAAGAAAACGGCCGGCGACACG 1372
consensus_7613#1      ATCTTCAAGGTGGCGCCGGAGGTGCACGTGGTGGAGGTGAGGAAGACCGGCGGCGACTCA 1410
                      ****** ****  *****  *    **** ** ******* *** ** * ******* * 

consensus_7613#0      CTGGAGTACCAGGCGTTCTGCAACAGAGACCTCAGGCCGTCGCTGAACGACATCTGCTGG 1432
consensus_7613#1      CCGGATTTCCGGGACTTCTACAAGCAGGAGCTTAAGCCGTCGCTTGGCGACATGGTGTGG 1470
                      * *** * ** **  **** ***    ** ** * *********   ******    ***

consensus_7613#0      ACCTCGCCGGCGACAGCAGCGTCGGAGAAGAACCAGCTGCCGGCAGTGTCGGAGGTGTCG 1492
consensus_7613#1      GCGTGGCAGGGAGGTGATTCGCCGCCG------CTCGTGCCGGCGGCGGGGAGGAGGCCG 1524
                       * * ** **     *   ** **  *      *   ******* * *  *  *  * **

consensus_7613#0      CCACTGAGTAGTCCTCGGAAT--TGATGTGACAGATTATCTAGGTGCAGTGGCAGATATT 1550
consensus_7613#1      ATCACGAAGCGCTCTTGATATGCCGACTCGATATCGAATTTTCACGTTGTAATTGATAT- 1583
                           **   *  ** *  **   **   ** *    ** *    *  **    ***** 

consensus_7613#0      GATCATCAGATATGTGCTGTTTCCCTTGTTGTTTCCTTTGCTTTGAATTGTTGTTTTGAT 1610
consensus_7613#1      --------GCTCTCTGCTTATTGATCTCTCGTACGTGTTTGTGAAGGGTGATGGGTGAAC 1635
                              * * * ****  **    * * **     **  *      ** **  *  * 

consensus_7613#0      TTTTTTTTTATTCTTGTTTGTGTTTCATAATGATCTTGGGGGTAGTGGTCTGGTATTTCC 1670
consensus_7613#1      CACCGTCCAGCTGATCTGTGAGTTTTTAAAAGCAC------GAATTACATNNNTNTTGGC 1689
                           *     *  * * ** ****   ** *  *      * * *       * **  *

consensus_7613#0      AAGTTCAAGATGAATTTCAATTATTGTTTTTTTCTGTTCTTTTGTTGTGTGGTGGACTGG 1730
consensus_7613#1      AAAAAAAAAAAAAAAAAAAAAAA------------------------------------- 1712
                      **    ** *  **    **  *                                     

consensus_7613#0      TGGTTTAGTGTTGATTGTTGGACATAGGTGATAGAATGTGTTCTCCTTTTGCTTAAATTG 1790
consensus_7613#1      ------------------------------------------------------------
                                                                                  

consensus_7613#0      CATGGTCCATTTGTAAGGTAAATTAATGGCATCACACCACCATAATATCCAATTTATGAA 1850
consensus_7613#1      ------------------------------------------------------------
                                                                                  

consensus_7613#0      TGTTTTAGAAAT 1862
consensus_7613#1      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)