cluster # 7623

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Oryza sativa
cluster # 7623 cluster # 7623 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7623#0 length = 2663 sequences # 5
consensusID : consensus_7623#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2663
fasta sequence
                              [GATCGACGGCGACGCCGCCCTCTCCATCTCCAGAGAGAGCCCTCTTCTCCGTTTCTTCCTACTAGGCTACTACTACTCCTCCTCGGCTCAACCCTCCCGTCCCCTCACCCCCACGCGCGCCGCCTTCTCCCCAGAACGCGCCGCGGCGAAGCGCCGCCGAAGCAGCCCCCACTCCTCCGCGCGCGGCGGCGGCGGCGCAGTCTCCAGACGCTTCCTCCTCCGGGGATCTCGCCTTTGAATGGACCGAAGTGATTCCATGGCTGATTCGCCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCCGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTCCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTTGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTCTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGACCATATCTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA-ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA-TAGTCATTTTACTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK102236             [GATCGACGGCGACGCCGCCCTCTCCATCTCCAGAGAGAGCCCTCTTCTCCGTTTCTTCCTACTAGGCTACTACTACTCCTCCTCGGCTCAACCCTCCCGTCCCCTCACCCCCACGCGCGCCGCCTTCTCCCCAGAACGCGCCGCGGCGAAGCGCCGCCGAAGCAGCCCCCACTCCTCCGCGCGCGGCGGCGGCGGCGCAGTCTCCAGACGCTTCCTCCTCCGGGGATCTCGCCTTTGAATGGACCGAAGTGATTCCATGGCTGATTCGCCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCCGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTCCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTTGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCACTCTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGACCATATCTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGT                                            ]
[+] EMBL OSR31271A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAGGAGAAAGAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB673473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATTTGACCAGCTTGCTTCATGAGCATTTGGCCTTGCCCCGCCAAGGAAATGCAGTCCGCCGAAACGGGATCCTGGAAATGGACATGTCCATTTGCCCCCTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGGGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCCCCAAGTTCAACCCAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTTTTCAGTACTCAGTCCAGACCCCAAACCGATGTTTTCCTGCGAGCTATAGCCGGTCCTCACTCAGATCATTGGTCTCATGGGGCCCATATTTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTTTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGACCAAGTCGTGGGAAAAAAGCATTAGTCA                                          ]
[+] EMBL AU173439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCNCCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTNTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGNCCATATNTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTNTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGTCATTTTACTGGAAAAA                            ]
[+] EMBL CF329880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGNAGTGNTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCTTTATCATATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGTCATTTTACTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_7623#0
GATCGACGGCGACGCCGCCCTCTCCATCTCCAGAGAGAGCCCTCTTCTCCGTTTCTTCCT
ACTAGGCTACTACTACTCCTCCTCGGCTCAACCCTCCCGTCCCCTCACCCCCACGCGCGC
CGCCTTCTCCCCAGAACGCGCCGCGGCGAAGCGCCGCCGAAGCAGCCCCCACTCCTCCGC
GCGCGGCGGCGGCGGCGCAGTCTCCAGACGCTTCCTCCTCCGGGGATCTCGCCTTTGAAT
GGACCGAAGTGATTCCATGGCTGATTCGCCAAGGAGGCGTAATGGCCTTCTGCGGGACCA
GGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCC
ATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCA
CAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTT
TACTGAGAAGGTGCTCAATTTCATGCCCGGTGTTGCTGTGATATCAATGGATAACTACAA
TGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACAC
ACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGA
TTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTCCCTAGCTCTAGGATTGT
TATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGT
TTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAG
AGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTA
TAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAA
CCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACC
TACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGA
TATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAG
GAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTAT
CATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATT
GGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGC
AACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAG
AGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCC
ACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGGCATTACC
AGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGC
CCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTC
ATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAG
AAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCA
GCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGA
AGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCT
TCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTTGTTTCTCATTTGGGCAA
TGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGT
GGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCT
GACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAA
CGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTT
CGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGCGAATCAGGCAGCGACA
TGCTGCTTTAAAAAGCTCACCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCT
CAAAACGGATCTTCATTCTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGA
GCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGACCATATCTGATAGATTTTA
CAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCG
GGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATC
GTCTGTAATGGATACTGGAAAGCCCCCAGTATCAATAAATTTTGGAGACGCTAGTAATCC
CGATATAATGTCGAACAAGTCGTGGGAAAAGAGCATAGTCATTTTACTGGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case