These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7623#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2663 fasta sequence [GATCGACGGCGACGCCGCCCTCTCCATCTCCAGAGAGAGCCCTCTTCTCCGTTTCTTCCTACTAGGCTACTACTACTCCTCCTCGGCTCAACCCTCCCGTCCCCTCACCCCCACGCGCGCCGCCTTCTCCCCAGAACGCGCCGCGGCGAAGCGCCGCCGAAGCAGCCCCCACTCCTCCGCGCGCGGCGGCGGCGGCGCAGTCTCCAGACGCTTCCTCCTCCGGGGATCTCGCCTTTGAATGGACCGAAGTGATTCCATGGCTGATTCGCCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCCGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTCCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTTGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTCTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGACCATATCTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA-ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA-TAGTCATTTTACTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK102236 [GATCGACGGCGACGCCGCCCTCTCCATCTCCAGAGAGAGCCCTCTTCTCCGTTTCTTCCTACTAGGCTACTACTACTCCTCCTCGGCTCAACCCTCCCGTCCCCTCACCCCCACGCGCGCCGCCTTCTCCCCAGAACGCGCCGCGGCGAAGCGCCGCCGAAGCAGCCCCCACTCCTCCGCGCGCGGCGGCGGCGGCGCAGTCTCCAGACGCTTCCTCCTCCGGGGATCTCGCCTTTGAATGGACCGAAGTGATTCCATGGCTGATTCGCCAAGGAGGCGTAATGGCCTTCTGCGGGACCAGGTCCAGTTGGTGAAAAGGAAGGACACAAATCGCTACGAAATCGTCCGCTTTCCTGATCCATTGTCATTTGAGAAAGGCTTCTTTGTTATGATCCGTGCCTGCCAGCTTCTGGTGCAGCACAATGAAGGGATGATTTTTGTTGGCGTTGCTGGACCCTCTGGGGCCGGGAAGACTGTGTTTACTGAGAAGGTGCTCAATTTCATGCCCGGTGTTGCTGTGATATCAATGGATAACTACAATGATGCAAGTCGCATAGTTGATGGCAATTTTGATGATCCACGCCTAACAGACTACGACACACTGTTGGAAAATATTCATGGTCTGAAGGAGGGAAGATCAGTTCAGGTTCCAATATATGATTTCAAGATGAGCTGCCGGACTGGATACAGAACAGTTGATGTCCCTAGCTCTAGGATTGTTATCATTGAAGGCATCTATGCATTGAGTGAAAAGTTACGATCTGTATTGGACCTACGTGTTTCTGTCACTGGTGGTGTTCATTTTGACCTGGTGAAGAGGGTCCTGAGGGACATACAGAGAGCTGGCCAGGAGCCTGAGGAAATAATTCATCAGATATCTGAAACGGTTTATCCGATGTATAAGGCTTTCATTGAGCCAGACTTGCAGACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAAGAGAAAGAGTCGTGTGTTTTCTGATGGCAAGGCAACTGTTAAAATTGATTGGTTGGAGCAACTTAACCGAAATTATATACAGGTGCAAGGAAGAGATAGAAATCATGTCAAATTTGTAGCGGAGAAGTTAGGTCTGGATGGCTCTTATATTCCACGCACATATATTGAACAAATTCAGCTGGAGAAACTGATAAACGATGTTATGGCATTACCAGAAGATCTCAAGACAAAGCTCAGCATTGATGATGAGCTGGTTTCAAGTCCAAAAGAGGCCCTTTCTCGGGTTTCTGCTGATAAGAGAAACAAACACCTGAAAAGTGGTCTATCTCATTCATATTCAACTCATGGAGATAAAAATATTGTGAAATTGAGTAAATTGACAGAAACCAACAGAAGGTTTGGAAGTGGGCGAGCCCCTGAACCTCCTGCAATTAATCAGGGTGCTATCACTCAGCTATCCGAACAGATTTCAACGTTGAATGAGAGGATGGACGAGTTCACCTCTCGAGTTGAAGAACTCAACTGTAAATTTGCAATAAAGAAATCATCGACCAGTCAGCAAAATTTAGCTCTTCCAAATGAAACTTGCAATGGTTCTGCACCTACAAATCTCTTTGTTTCTCATTTGGGCAATGGTACCCTGATACCTCATTCGTCATCATCGAACCAACTTTTGAAGGAGTCCCCCATTGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATCTGACCAGCTTGCTTCATGAGCATTTGGCCTTGACCCGCCAAGGAAATGCAGTCCGCAGAAACGGGATCCTGGAAATGGACATGTCCATCTGCCCACTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCACTCTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGACCATATCTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGT ] [+] EMBL OSR31271A [ GACAGCACATATAAAAATAATCAACAAGTTCAACCCATTCTCAGGGTTCCAAAATCCTATGTACATTCTAAAGTCTCCACGAACTATAACACCTACTGACATCAAAGTTGCTCTTGGTGAAGATCATACAGAAAGCATTGAAGAAACTTATGATATATATTTGCTTCCTCCAGGCGAAGATCCAGAATCATGCCAATCTTATTTGAGAATGAGGAATAGGGAAGGGAAATATAATCTGATGTTTGAGGAGTGGGTGACCGATAATCCTTTTATCATATCACCAAGGATTACGTTTGAAGTCAGTGTTCGTCTTCTTGGAGGTTTGATGGCATTGGGATATACTATAGCAGCTATACTGAGGAGAAAGAGTCG ] [-] EMBL CB673473 [ TGTGGATGAGATTAATGCCATATCAAGAGGTCAGCGCCAAGTGATACATCAGCTTGACAATTTGACCAGCTTGCTTCATGAGCATTTGGCCTTGCCCCGCCAAGGAAATGCAGTCCGCCGAAACGGGATCCTGGAAATGGACATGTCCATTTGCCCCCTCATTGCCCTGACAATTGGCGGTTTCGGCTATTTGGTGTTCAAGAGCCTCAACCGGAGCTAACCGAAGGGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCACCCCCAAGTTCAACCCAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTTTTCAGTACTCAGTCCAGACCCCAAACCGATGTTTTCCTGCGAGCTATAGCCGGTCCTCACTCAGATCATTGGTCTCATGGGGCCCATATTTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTTTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGACCAAGTCGTGGGAAAAAAGCATTAGTCA ] [+] EMBL AU173439 [ GAAGCGAATCAGGCAGCGACATGCTGCTTTAAAAAGCTCNCCACCAAGTTCAACCAAGAACCAGAGAAAGCCAAGAAGTCTCAAAACGGATCTTCATTNTTCAGTACTCAGTCCAGACACCAAACCGATGTTCTCCTGCGAGCTATAGACGGTCCTCACTCAGATCATTGGTCTCATGGGGNCCATATNTGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTNTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGTAGAGTTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCAGTATCA ATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGTCATTTTACTGGAAAAA ] [+] EMBL CF329880 [ TGATAGATTTTACAATTTCAAGATAGATAAACTCATATACCAGCACAAGCAACAGAGCAGTCTTGATACTCGGGCCAAGTTACTTGGAAGCTTAAAAACTGTGTACTAAAGAGCGNAGTGNTATACAATATCGTCTGTAATGGATACTGGAAAGCCCCCTTTATCATATAAATTTTGGAGACGCTAGTAATCCCGATATAATGTCGAACAAGTCGTGGGAAAAGAGCA TAGTCATTTTACTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||