These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7646#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1626 fasta sequence [ACCAACCGCCCTCCCTTCTCCCCCTCCCCACCAAGTAGGGTTTCACCGCCGCCTCCTCTGCCGCCATGGCGCGCGCCGCCGCCTCCAGGCTCGCCGCCGCGGCAACCTCCACCTCGACGCTCGAGATGTTCTCCCGCCACCTCGCGGCCGCCTCGTCGGCGTGGGGCATCGCTTCGTCGCGGGCTCCCTATCCAGGGAGGGAGAGGAGGAG-CGCGAGCTGGTGGTGCCCTACCAGGTCGTTCCATGCCACAAGGGGAATGAATGCAAGGGATTACTATGATGTTCTTGGAGTGAACAAAGATGCATCTGCATCAGACATAAAGAAGGCATATTATCTGCTCGCAAAGAAATTCCATCCTGATACTAATAAAGAAGATGCTGATGCAGAAAAGAAATTTCAAGAAGTTCAGCATGCCTACGAGGTTTTGAAGGATGATGATAAGCGTGAAACATACGACCAGCTTGGAGCAGAAGCTTATGAGCGCCAAGCGTCAGGTGGTGGCCCCGATGATTTTTCTGGGAGTCATCCATTTGGTGACATTTTTGGTGATATGTTTGATAATCCTTTTGCCATGAGAGGAGGTCGAGATGTCAAGGTTCCAATCAAACTATCATTCATGGAAGCCGTCCAAGGCTGCAGAAAAACTATTGCATATGAGGCTGATGTTTTCTGCGATACTTGCAATGGAAGTGGTGTTCCTCCTGGCACTGTACCTCAAACATGTAAAGCCTGTCGAGGTGCTGGTGTGATATTCATGCAGCGGGGTATAATGAGTATAGAAACTACTTGTTCTAGGTGTGGTGGAAGTGGGAAAATTGTGAAGAATTTTTGCAAGACATGCAAGGGTGAACAGCTAGTGAAGGGAAAAAAATCAGTCAAGCTCGACATAATGGCTGGCATCGATGACAATGACACTATGAAGGTTTTTGGCAAGGGTGGTGCAGATGTTGAGCGCAATAAACCTGGTGATCTCTATGTTACTATCAAGATCAGAGAGGATCCTGTCTTCCGTAGAGAAGGCAACCATGTGCATGTTGACGCTATTATAAGCATTGCCCAGGCTGTACTAGGTGGAACTGTCACAGTACCAACCCTTACGGGCAACGTTTCAGTCAAGGTTCGCCAAGGTACCCAACCAGGAGAAAAGGTTGTCCTCAGGGGCAAAGGAATAAAAGCACGGAATTCCCCAGCCTATGGGAATCAGTATATTCACTTCAACGTCCGAGTTCCAACGGATGTGACACAACGACAACGCGAGTTAATGGAGGAATTTGATAAAGAGGAGTGCAACGAAGGGGAGAGAGTTGCAGCTGCCTCCGGATGAAATTTTGCCGCACCCATTCGTTGGTTATTATACGTAATAAGCCGATGGCCGAAGCCCCAATTATAATGGGCTCGGTATGACGTACATGATGTAGTCTTTAGAGTGCAGATTTTGCATTGTATAATATGCACGCTAAGGCTAAATAACTGTACTAACCTTTTGACCTTTTATTTATTGTTATGGCAAATGTAACAGCTAATATAACTAGGAACATATAATAGGAAGGCTATGTGATGTGTAATGCCTTAGCTGCCGCATAAACTCACGAATCCCCTGTGCAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK065706 [ACCAACCGCCCTCCCTTCTCCCCCTCCCCACCAAGTAGGGTTTCACCGCCGCCTCCTCTGCCGCCATGGCGCGCGCCGCCGCCTCCAGGCTCGCCGCCGCGGCAACCTCCACCTCGACGCTCGAGATGTTCTCCCGCCACCTCGCGGCCGCCTCGTCGGCGTGGGGCATCGCTTCGTCGCGGGCTCCCTATCCAGGGAGGGAGAGGAGGAG CGCGAGCTGGTGGTGCCCTACCAGGTCGTTCCATGCCACAAGGGGAATGAATGCAAGGGATTACTATGATGTTCTTGGAGTGAACAAAGATGCATCTGCATCAGACATAAAGAAGGCATATTATCTGCTCGCAAAGAAATTCCATCCTGATACTAATAAAGAAGATGCTGATGCAGAAAAGAAATTTCAAGAAGTTCAGCATGCCTACGAGGTTTTGAAGGATGATGATAAGCGTGAAACATACGACCAGCTTGGAGCAGAAGCTTATGAGCGCCAAGCGTCAGGTGGTGGCCCCGATGATTTTTCTGGGAGTCATCCATTTGGTGACATTTTTGGTGATATGTTTGATAATCCTTTTGCCATGAGAGGAGGTCGAGATGTCAAGGTTCCAATCAAACTATCATTCATGGAAGCCGTCCAAGGCTGCAGAAAAACTATTGCATATGAGGCTGATGTTTTCTGCGATACTTGCAATGGAAGTGGTGTTCCTCCTGGCACTGTACCTCAAACATGTAAAGCCTGTCGAGGTGCTGGTGTGATATTCATGCAGCGGGGTATAATGAGTATAGAAACTACTTGTTCTAGGTGTGGTGGAAGTGGGAAAATTGTGAAGAATTTTTGCAAGACATGCAAGGGTGAACAGCTAGTGAAGGGAAAAAAATCAGTCAAGCTCGACATAATGGCTGGCATCGATGACAATGACACTATGAAGGTTTTTGGCAAGGGTGGTGCAGATGTTGAGCGCAATAAACCTGGTGATCTCTATGTTACTATCAAGATCAGAGAGGATCCTGTCTTCCGTAGAGAAGGCAACCATGTGCATGTTGACGCTATTATAAGCATTGCCCAGGCTGTACTAGGTGGAACTGTCACAGTACCAACCCTTACGGGCAACGTTTCAGTCAAGGTTCGCCAAGGTACCCAACCAGGAGAAAAGGTTGTCCTCAGGGGCAAAGGAATAAAAGCACGGAATTCCCCAGCCTATGGGAATCAGTATATTCACTTCAACGTCCGAGTTCCAACGGATGTGACACAACGACAACGCGAGTTAATGGAGGAATTTGATAAAGAGGAGTGCAACGAAGGGGAGAGAGTTGCAGCTGCCTCCGGATGAAATTTTGCCGCACCCATTCGTTGGTTATTATACGTAATAAGCCGATAGCCGAAGCCCCAATTATAATGGGCTCGGTATGACGTACATGATGTAGTCTTTAGAGTGCAGATTTTGCATTGTATAATATGCACGCTAAGGCTAAATAACTGTACTAACCTTTTGACCTTTTATTTATTGTTATGGCAAATGTAACAGCTAATATAACTAGGAACATATAATAGGAAGGCTATGTGATGTGTAATGCCTTAGCTGCCGCA ] [+] EMBL AU176439 [ CTCCCTATCCAGGGAGGGAGAGGAGGAGCCGCGAGCTGGTGGTGCCCTACCAGGTCGTTCCATGCCACAAGGGGAATGAATGCAAGGGATTACTATGATGTTCTTGGAGTGAACAAAGATGCATCTGCATCAGACATAAAGAAGGCATATTATCTGCTCGCAAAGAAATTCCATCCTGATACTAATAAAGAAGATGCTGATGCAGAAAAGAAATTTCAAGAAGTTCAGCATGCCTACGAGGTTTTGAAGGATGATGATAAGCGTGAAACATACGACCAGCT ] [+] EMBL CA999696 [ AATGAGTATAGAAACTACTTGTTCTAGGTGTGGTGGAAGTGGGAAAATTGTGAAGAATTTTTGCAAGACATGCAAGGGTGAACAGCTAGTGAAGGGGAAAAAATCAGTCAAGCTCGACATAATGGCTGGCATCGATGACAATGACACTATGAAGGTTTTTGGCAAGGGTGGTGCAGATGTTGAGCGCAATAAACCTGGTGATCTCTATGTTACTATCAAGATCAGAGAGGATCCTGTCTTCCGTAGAGAAGGCAACCATGTGCATGTT ] [+] EMBL CF328911 [ ACTGTCACAGTACCAACCCTTACGGGCAACGTTTCAGTCAAGGTTCGCCAAGGTACCCAACCAGGAGAAAAGGTTGTCCTCAGGGGCAAAGGAATAAAAGCACGGAATTCCCCAGCCTATGGGAATCAGTATATTCACTTCAACGTCCGAGTTCCAACGGATGTGACACAACGACAACGCGAGTTAATGGAGGAATTTGATAAAGAGGAGTGCAACGAAGGGGAGAGAGTTGCAGCTGCCTCCGGATGAAATTTTGCCGCACCCATTCGTTGGTTATTATACGTAATAAGCCGATGGCCGAAGCCCCAATTATAATGGGCTCGGTATGACGTACATGATGTAGTCTTTAGAGTGCAGATTTTGCATTGTATAATATGCACGCTAAGGCTAAATAACTGTACTAACCTTTTGACCTTTTATTTATTGTTATGGCAAATGTAACAGCTAATATAACTAGGAACATATAATAGGAAGGCTATGTGATGTGTAATGCCTTAGCTGCCGCATAAACTCACGAA ] [-] EMBL CF328912 [ GTTCGCCAAGGTACCCAACCAGGAGAAAAGGTTGTCTTCAGGGGCAAAGGAATAAAAGCACGGAATTCCCCAGCCTATGGGAATCAGTATATTCACTTCAACGTCCGAGTTCCAACGGATGTGACACAACGACAACGCGAGTTAATGGAGGAATTTGATAAAGAGGAGTGCAACGAAGGGGAGAGAGTTGCAGCTGCCTCCGGATGAAATTTTGCCGCACCCATTCGTTGGTTATTATACGTAATAAGCCGATGGCCGAAGCCCCAATTATAATGGGCTCGGTATGACGTACATGATGTAGTCTTTAGAGTGCAGATTTTGCATTGTATAATATGCACGCTAAGGCTAAATAACTGTACTACCCTTTTGACCTTTTATTTATTGTTATGGCAAATGTAACAGTTAATATAACTAGGAACATATAATAGGAAGGCTATGTGATGTGTAATGCCTTAGCTGCCGCATAAACTCACGAATCCCCTGTGCAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||