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Oryza sativa
cluster # 7652 cluster # 7652       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7652#0 length = 2634 sequences # 5  

consensusID : consensus_7652#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2634
fasta sequence
                              [CTCCCCACCACCACCTACCTCTCCCCTCTTATTCCTCCTCGCCTCCTCCCCGCATCCGTACACCGGCGCGCCGCTGAATTCCTAACCCTAGCCCTTGCCTCCGCCTCTCCTCCATGGCCGCCGCCCCCGCGTCCCCGTTCGCGTAGCCCTCCATGGGATCCGCCCGCGCCGCCGACGACGAAGGGAGGAGACCGACCGGGGGAGAAGAATGAGGTGCTGCGCCAGCCGCGTGGCGTCCGCCGGGTGCCGGGCCATGGGAGTTGCGGGTGGGGTGAAGGCGACGTCGCTCCGCAGCAGCCGCCGCCGCCGCGAGCTGCCGTCGCCGGCCCCGTTCTCCGAGCCCTTCACCGAACGCCCGGCGATCCTATATAATTAACTGGCCGCCCCGCGCCGTCTCTCCTCCGCTGCATCGGTCGCCGGCTCTAGCTGCTGACCGCCGTGCGTAGCGGGCGCCCGCGCCGCTCCACGCGCTGTCCCGGCGATCTCGCCTGGCTCATCTCGCTCTGCTTCCTCTCTGCTTCCTGATTCGTTCGTGCGCGTGGGGTGATCTGAAATGGAGGTGTTCGGCGATCTGGATAAGGTGGACGATGCTGAGTGCGTGGAGGTGGATCCGACCAGGCGGTACATACGCTACAATGAGGTGCTAGGGAGAGGAGCTATGAAGACTGTTTACAAGGCATTTGATGAGGTTGAAGGCATTGAGGTTGCATGGAGCCAAGTGGAGATAGATGAGGTTATGCAATCTCCAGATAATCTTGAACGGCTATACTCTGAAGTTCATCTACTAAAGTCTCTCAAGCATGAAAACGTAATGAAGTTCTATAATTATTGGGTTGATGATCAAAAGAAGACAATTAATGTTATTACAGAACTTTTCACATCTGGAAGTCTCAGGCAGTATCGTCAGAAACATCCACGTGTTGACTTGAAGGCAATAAAGAATTGGGCTAGACAGGTACTCCGTGGGCTGGATTACCTGCACACCCACCAACCTCCAATTATCCACAGAGACCTGAAGTGTGACAACATTTTTGTCAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCCACGGTGATGCTAACGCCTAGAGCAAAAAGTGTTATTGGTACTCCTGAATTCATGGCGCCTGAGCTATATGATGAGAATTATGATGAACTTGTTGATATATACTCATTTGGAATGTGTATGTTGGAGATGTTCACTCTTGAGTATCCTTACAGTGAATGTACAAATGCAGCTCAAATTTTTAAGAAAGTATCTAAGGGTGTCAAGCCGGCTGCTCTGGCTAAAATCACAAATATTCAGGCAAAACGATTTATTGATAAATGTTTAGTTCCTGCTTCTGAAAGGCTGTCTGCCAAAGAACTATTGCAAGACCCCTTTCTTTGCTCTGATAATTCTAGTGTTCTTGTTGGCACTAAGTTTCCGTCATCATTACCCAAATCAGTAGATGTCTCTTTGGAAGCTTTGCACATGGATGTTGACACCAATGAATCTATGTGTACTAGCACATGCAAGAGAAATGATCTTGGTGGTCCACATAGATCTGTGTTGGAGTTCACGCGAACTAACAAAAACACAGAGCTAAAGCTAACAGGCGAGAAACTTGATGACAATTCAGTATCACTGGTTTTGCGAATTGCCGATTTGTGTGGACATGCAAGGAACATTCATTTTCTCTTCTACTTGGATTCTGATACAGCTATGTCTGTTGCTGCTGAAATGGTCGAGCAGTTGGAGTTAGCAGACTGTGATGTTACTTTCATTGCTGATTTTATTGATCTTTTGATAGTGAATCTTGTCCCTGGTCAGCAGCTGATGAATGATGCAGTAATGAGTACTTCCAGCGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTTGACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACCAAGTGATTATATTGATTCTCTCTTGAATGCAACCAATCTAGGAGGACCAAATAGCTCTGAAGGGTCAGACATTTCTGTTCAGCTTGATGGGAGTTCCAAAAGTCTTAGTGAGTATGGCGTTGACGAATACAGGACACTGGAATGTGGTGCGTACAAAGGAACCGA-TAAACTGGGCTGCAGACATCCGTTAAGTAATGGTTCAAGTAATTTTGCAATCTTTCAGATGGATCAAGCATCACATCACTCGGAGTTGGTGATCGGTGCATCGGTTTCAATTACTGAAAATCGAGATGTGTTAAATGGAGAGCTTGGTCT-GATTGAAGCTCAGTACGAGCAATGGTTTCGTGAATTAACAAGGATGCGGGAAGAAGCTTTGGAAGGAGCCCGGAAGAAGTGGTTACCAGATAAATGATGATGTATAAAGTCAAGTTTTGTGTTTCATCTGAACATCATAAGAAAGAATGTTCAGATGTTCATGTTCCAGCTTCCTGGTTCAACATTTCTTGTGTTTCATACATAATTGAGCAACGTTAATAATTTTTAGTTTAAACGTTGCTGTAGTCTGCAATGCTGTAAAGCCAGCTTGTTGGTAATTATTAAGCCGTTTGGCAAGAGTTTACAGCATGATATTTAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073845             [CTCCCCACCACCACCTACCTCTCCCCTCTTATTCCTCCTCGCCTCCTCCCCGCATCCGTACACCGGCGCGCCGCTGAATTCCTAACCCTAGCCCTTGCCTCCGCCTCTCCTCCATGGCCGCCGCCCCCGCGTCCCCGTTCGCGTAGCCCTCCATGGGATCCGCCCGCGCCGCCGACGACGAAGGGAGGAGACCGACCGGGGGAGAAGAATGAGGTGCTGCGCCAGCCGCGTGGCGTCCGCCGGGTGCCGGGCCATGGGAGTTGCGGGTGGGGTGAAGGCGACGTCGCTCCGCAGCAGCCGCCGCCGCCGCGAGCTGCCGTCGCCGGCCCCGTTCTCCGAGCCCTTCACCGAACGCCCGGCGATCCTATATAATTAACTGGCCGCCCCGCGCCGTCTCTCCTCCGCTGCATCGGTCGCCGGCTCTAGCTGCTGACCGCCGTGCGTAGCGGGCGCCCGCGCCGCTCCACGCGCTGTCCCGGCGATCTCGCCTGGCTCATCTCGCTCTGCTTCCTCTCTGCTTCCTGATTCGTTCGTGCGCGTGGGGTGATCTGAAATGGAGGTGTTCGGCGATCTGGATAAGGTGGACGATGCTGAGTGCGTGGAGGTGGATCCGACCAGGCGGTACATACGCTACAATGAGGTGCTAGGGAGAGGAGCTATGAAGACTGTTTACAAGGCATTTGATGAGGTTGAAGGCATTGAGGTTGCATGGAGCCAAGTGGAGATAGATGAGGTTATGCAATCTCCAGATAATCTTGAACGGCTATACTCTGAAGTTCATCTACTAAAGTCTCTCAAGCATGAAAACGTAATGAAGTTCTATAATTATTGGGTTGATGATCAAAAGAAGACAATTAATGTTATTACAGAACTTTTCACATCTGGAAGTCTCAGGCAGTATCGTCAGAAACATCCACGTGTTGACTTGAAGGCAATAAAGAATTGGGCTAGACAGGTACTCCGTGGGCTGGATTACCTGCACACCCACCAACCTCCAATTATCCACAGAGACCTGAAGTGTGACAACATTTTTGTCAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCCACGGTGATGCTAACGCCTAGAGCAAAAAGTGTTATTGGTACTCCTGAATTCATGGCGCCTGAGCTATATGATGAGAATTATGATGAACTTGTTGATATATACTCATTTGGAATGTGTATGTTGGAGATGTTCACTCTTGAGTATCCTTACAGTGAATGTACAAATGCAGCTCAAATTTTTAAGAAAGTATCTAAGGGTGTCAAGCCGGCTGCTCTGGCTAAAATCACAAATATTCAGGCAAAACGATTTATTGATAAATGTTTAGTTCCTGCTTCTGAAAGGCTGTCTGCCAAAGAACTATTGCAAGACCCCTTTCTTTGCTCTGATAATTCTAGTGTTCTTGTTGGCACTAAGTTTCCGTCATCATTACCCAAATCAGTAGATGTCTCTTTGGAAGCTTTGCACATGGATGTTGACACCAATGAATCTATGTGTACTAGCACATGCAAGAGAAATGATCTTGGTGGTCCACATAGATCTGTGTTGGAGTTCACGCGAACTAACAAAAACACAGAGCTAAAGCTAACAGGCGAGAAACTTGATGACAATTCAGTATCACTGGTTTTGCGAATTGCCGATTTGTGTGGACATGCAAGGAACATTCATTTTCTCTTCTACTTGGATTCTGATACAGCTATGTCTGTTGCTGCTGAAATGGTCGAGCAGTTGGAGTTAGCAGACTGTGATGTTACTTTCATTGCTGATTTTATTGATCTTTTGATAGTGAATCTTGTCCCTGGTCAGCAGCTGATGAATGATGCAGTAATGAGTACTTCCAGCGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTTGACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACCAAGTGATTATATTGATTCTCTCTTGAATGCAACCAATCTAGGAGGACCAAATAGCTCTGAAGGGTCAGACATTTCTGTTCAGCTTGATGGGAGTTCCAAAAGTCTTAGTGAGTATGGCGTTGACGAATACAGGACACTGGAATGTGGTGCGTACAAAGGAACCGA TAAACTGGGCTGCAGACATCCGTTAAGTAATGGTTCAAGTAATTTTGCAATCTTTCAGATGGATCAAGCATCACATCACTCGGAGTTGGTGATCGGTGCATCGGTTTCAATTACTGAAAATCGAGATGTGTTAAATGGAGAGCTTGGTCT GATTGAAGCTCAGTACGAGCAATGGTTTCGTGAATTAACAAGGATGCGGGAAGGAGCTTTGGAAGGAGCCCGGAAGAAGTGGTTACCAGATAAATGATGATGTATAAAGTCAAGTTTTGTGTTTCATCTGAACATCATAAGAAAGAATGTTCAGATGTTCATGTTCCAGCTTCCTGGTTCAACATTTCTTGTGTTTCATACATAATTGAGCAACGTTAATAATTTTTAGTTTAAACGTTGCTGTAGTCTGCAATGCTGTAAAGCCAGCTTGTTGGTAATTATTAAGCCGTTTGGCAAGAGTTTACAGCATGATATTT                      ]
[+] EMBL C27555               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTTACTTTCATTGCTGATTTTATTGATCTTTTGATAGTGAATCTTGTCCCTGGTCAGCAGCTGATGAATGATGCAGTAATGAGTACTTCCAGCGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTTGACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACCAAGTGATTATATTGATTCTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSC12362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGCAGCTGATGAATGATGCAGTAATGAGTACTTCCAGCGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTTGACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACCAAGTGATTATATTGATTCTCTCTTGAATGCAACCAATCTAGGAGGACCAAATAGCTCTGAAGGGTCAGACATTTCTGTTCAGCTTGATGGGAGTTCCAAAAGTCTTAGTGAGTATGGCGTTGACGGATACAGGACACTGGAATGTGGTGCGTACAAAGGAACCGA TAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB683168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGCAGTAATGAGTACTTCCAGCGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTTGACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACCAAGTGATTATATTGATTCTCTCTTGAATGCAACCAATCTAGGAGGACCAAATAGCTCTGAAGGGTCAGACATTTCTGTTCAGCTTGATGGGAGTTCCAAAAGTCTTAGTGAGTATGGCGTTGACGAATACAGGACACTGGAATGTGGTGCGTACAAAGGAACCGA TAAACTGGGCTGCAGACATCCGTTAAGTAATGGTTCAAGTAATTTTGCAATCTTTCAGATGGATCAAGCATCACATCACTCGGAGTTGGTGATCGGTGCATCGGTTTCAATTACTGAAAATCGAGATGTGTTAAATGGAGAGCTTGGTCT GATTGAAGCTCAGTACGAGCAATGGTTTCGTGAATTAACAAGGATGCGGGAAGAAGCTTTGGAAGGAGCCCGGAAGAAGTGGTTACCAGATAAATGATGATGTATAAAGTCAAGTTTTGTGTTTCATCTGAACATCATAAGAAAGAATGTTCAGATGTTCATGTTCCAGCTTCCTGGTTCAACATTTCTTGTGTTTCATACATAATTGACCAACTTTGGGAATTTTTAGTTTAAACGTTGCTGTAGTCTGCAATGC                                                                                   ]
[+] EMBL C98225               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGANCCGATTAAACTGGGCTGCAGACACCCGTTAAGTAATGGTCCAAGTAATTTTGCAATCTTCCAGATGGATCAAGCATCACATCACTCGGAGTTGGTGACCGGTGCANCGGTTTCAATTACTGAAAANCGAGATGTGTTAAATGGAGAGCTTGGTCTGGATTGAAGCTCAGTACGAGCAATGGTTTCGTGAATTAACAAGGATNCGGGAAGAAGCTTTGGAAGGANCCCGGAAGAAGTGGTTACCAGATAAATGATGATGTATAAAGTCAAGTTTTGTGTTTCATCTGAACATCATAAGAAAGAATGTTCAGATGTTCATGTTCCAGCTTCCTGGTTCAACATTTCTTGTGTTTCATACATAATTGAGCAACGTTAATAATTTTTAGTTTAAACGTTGCTGTAGTCTGCAATGCTGTAAAGCCAGCTTGTTGGTAATTATTAAGCCGTTTGGCAAGAGTTTACAGCATGATAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_7652#0 CTCCCCACCACCACCTACCTCTCCCCTCTTATTCCTCCTCGCCTCCTCCCCGCATCCGTA CACCGGCGCGCCGCTGAATTCCTAACCCTAGCCCTTGCCTCCGCCTCTCCTCCATGGCCG CCGCCCCCGCGTCCCCGTTCGCGTAGCCCTCCATGGGATCCGCCCGCGCCGCCGACGACG AAGGGAGGAGACCGACCGGGGGAGAAGAATGAGGTGCTGCGCCAGCCGCGTGGCGTCCGC CGGGTGCCGGGCCATGGGAGTTGCGGGTGGGGTGAAGGCGACGTCGCTCCGCAGCAGCCG CCGCCGCCGCGAGCTGCCGTCGCCGGCCCCGTTCTCCGAGCCCTTCACCGAACGCCCGGC GATCCTATATAATTAACTGGCCGCCCCGCGCCGTCTCTCCTCCGCTGCATCGGTCGCCGG CTCTAGCTGCTGACCGCCGTGCGTAGCGGGCGCCCGCGCCGCTCCACGCGCTGTCCCGGC GATCTCGCCTGGCTCATCTCGCTCTGCTTCCTCTCTGCTTCCTGATTCGTTCGTGCGCGT GGGGTGATCTGAAATGGAGGTGTTCGGCGATCTGGATAAGGTGGACGATGCTGAGTGCGT GGAGGTGGATCCGACCAGGCGGTACATACGCTACAATGAGGTGCTAGGGAGAGGAGCTAT GAAGACTGTTTACAAGGCATTTGATGAGGTTGAAGGCATTGAGGTTGCATGGAGCCAAGT GGAGATAGATGAGGTTATGCAATCTCCAGATAATCTTGAACGGCTATACTCTGAAGTTCA TCTACTAAAGTCTCTCAAGCATGAAAACGTAATGAAGTTCTATAATTATTGGGTTGATGA TCAAAAGAAGACAATTAATGTTATTACAGAACTTTTCACATCTGGAAGTCTCAGGCAGTA TCGTCAGAAACATCCACGTGTTGACTTGAAGGCAATAAAGAATTGGGCTAGACAGGTACT CCGTGGGCTGGATTACCTGCACACCCACCAACCTCCAATTATCCACAGAGACCTGAAGTG TGACAACATTTTTGTCAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGC CACGGTGATGCTAACGCCTAGAGCAAAAAGTGTTATTGGTACTCCTGAATTCATGGCGCC TGAGCTATATGATGAGAATTATGATGAACTTGTTGATATATACTCATTTGGAATGTGTAT GTTGGAGATGTTCACTCTTGAGTATCCTTACAGTGAATGTACAAATGCAGCTCAAATTTT TAAGAAAGTATCTAAGGGTGTCAAGCCGGCTGCTCTGGCTAAAATCACAAATATTCAGGC AAAACGATTTATTGATAAATGTTTAGTTCCTGCTTCTGAAAGGCTGTCTGCCAAAGAACT ATTGCAAGACCCCTTTCTTTGCTCTGATAATTCTAGTGTTCTTGTTGGCACTAAGTTTCC GTCATCATTACCCAAATCAGTAGATGTCTCTTTGGAAGCTTTGCACATGGATGTTGACAC CAATGAATCTATGTGTACTAGCACATGCAAGAGAAATGATCTTGGTGGTCCACATAGATC TGTGTTGGAGTTCACGCGAACTAACAAAAACACAGAGCTAAAGCTAACAGGCGAGAAACT TGATGACAATTCAGTATCACTGGTTTTGCGAATTGCCGATTTGTGTGGACATGCAAGGAA CATTCATTTTCTCTTCTACTTGGATTCTGATACAGCTATGTCTGTTGCTGCTGAAATGGT CGAGCAGTTGGAGTTAGCAGACTGTGATGTTACTTTCATTGCTGATTTTATTGATCTTTT GATAGTGAATCTTGTCCCTGGTCAGCAGCTGATGAATGATGCAGTAATGAGTACTTCCAG CGAATCTAAAATGGGTGAAAGTGAGCACGTAATTACTTCCCAGCAGCATCCATCGGAGTT GACACATGATTATGTACTAGTTGAAGGTATGATGCATTCGAAAGAAGCCAATGCATCACC AAGTGATTATATTGATTCTCTCTTGAATGCAACCAATCTAGGAGGACCAAATAGCTCTGA AGGGTCAGACATTTCTGTTCAGCTTGATGGGAGTTCCAAAAGTCTTAGTGAGTATGGCGT TGACGAATACAGGACACTGGAATGTGGTGCGTACAAAGGAACCGATAAACTGGGCTGCAG ACATCCGTTAAGTAATGGTTCAAGTAATTTTGCAATCTTTCAGATGGATCAAGCATCACA TCACTCGGAGTTGGTGATCGGTGCATCGGTTTCAATTACTGAAAATCGAGATGTGTTAAA TGGAGAGCTTGGTCTGATTGAAGCTCAGTACGAGCAATGGTTTCGTGAATTAACAAGGAT GCGGGAAGAAGCTTTGGAAGGAGCCCGGAAGAAGTGGTTACCAGATAAATGATGATGTAT AAAGTCAAGTTTTGTGTTTCATCTGAACATCATAAGAAAGAATGTTCAGATGTTCATGTT CCAGCTTCCTGGTTCAACATTTCTTGTGTTTCATACATAATTGAGCAACGTTAATAATTT TTAGTTTAAACGTTGCTGTAGTCTGCAATGCTGTAAAGCCAGCTTGTTGGTAATTATTAA GCCGTTTGGCAAGAGTTTACAGCATGATATTTAAAAAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)