These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7661#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1992 fasta sequence [GCGCTTAGGCTTAGCTAGTACTAATCATCATTAGTGTATAGCTAAGCTAGCTCCATTTCTTGCGCTTCTTGGTTTTGTCTGGGAACTATTGTATAGGTCTATATCGATCTCCATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGCATCCACCAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGCTGCGAGTTTCATCGCCGGCGGCGGCGGCGACAATGCGTGCTTCGACGAGCTCATGGCGGGAGGGTCGTCGGGTGACACTAGGATGGTGGCCATGGACGACGGCGACGACGGGAGTGGCTTCTTGGTGGGGGACGCCGAGGCCGAGCACCTGATGCTGTCGTCCTCGTCGCCGTCGTCGCTCTCCTCGGGCCGCTCCCTCTCCATCGACAGCGCCGGCTCCATGTCCTCCTTCTCGCTCGACGCCGCCGCGGCGCTGGCGATGTCGACCCTCGCCGTCCCGCACCCGTACCCGCCGCCCGTCGCGCACGGCATGTTCGCCTCCGGCGACGGTGGCGGCGGCGGCGGCGGCGCAGTCGACGACCACGAGGACGCCATCATGCGTGCCATGATGGCCGTCATCTCCTCCGCCTCGGCCTCCCCCTCCTCCTCGGGCGGCTCCGCCTCCTCGCCCACCCCGTTCAGCCGGGACAGCGGCGCGCACCACCAGCCTGCAGGTCAGCCAGCCATGGCGGCGCCGCAGCAGCCGCGTGGAGGGAACGGCGGCCACGTGGTGGTGAAGAGCAGCAGCAGCAGCGGCGGCCTCGCCGTGCCGATGGATCAGAAGCCCGGCGGCGGCGGGCGGGGACGGCAGCAGGAGGAGGCGGCGGCGGCGAGCGCCACCAACAGCAGCCAGCTCTACCACATGATGTCGGAGAGGAAGAGGAGGGAGAAGCTCAACGACAGCTTCCACACGCTCAGATCACTCCTCCCACCTTGCTCCAAGAAGGACAAGACGACGGTGCTGATCAACGCGGCCAAGTACCTCAAGTCGCTGGAGACGGAGATCACGGAGCTGGAAGGGACGAACACGAAGCTGGAGAAGCACATCGCCGGCGGCGGCGGCGCGGCGGACGCCGCCATGAGGGCTCGCCGGGCGCAGCAGAGGGCCAAGGTGCAGATCAGCAAGGCGGCGGACTCGCAGTCGCAGCAGCTGGTGAGCCTGACGGTGATGGTGA-TGGTGGAGTGC--G-ACG-TGGT-GGAGCTGGTGCT-CCAC-ATCCTGGAAT-GCCTC--AGGT-GGATG-AAGG-AGATCAGCGTGCTGTCCGTCTACGCCGACACCTACTCGCCGCAGCTTCTTCTCAAGGCCATCGCCAACATCAAGCTCCAGATCGTGGGAGGAGATTGGAACGAGGCGTCGTTCCA--CGAGGCGATGACGAAGGCGGCGAACGACGCGACCA-TTTCCTGCGCCCCGCTCGCGATCACGGCAGCAC-AGTGATTGCTGATTAGTGAGTGATTAGCAGCGAGCGGCGGCGGTGGCGACCTACCGGTTAATTCAATCCATCCTCATCGTCCTCGCGCGCGTGCAGTCATGGTTGAACGTTGAA-GCAGTAAAAAAAATATTTATGTATGGAGGGCGATGGGTTCGCTACGTCATAACCGATCTCAATAGTTGGAGGAGGAAAACGAGGACAATTCAAATACTTCGAGAGTGGGGAAGAATATTGTTAGATATATATTAGGGTTTGGTTATTCATTCCTTTTTCCGTCTTAAAATATAATAAGTTTTGATGATGTATAAACATGTATAAATATATAGCTAAAAGTTATTATATTTTAGGACGGTGATAGTAATTACGTAGCGTATTTTTCAGGTGTGCCCTAGTTGCAGCCGCAAGCTAGGTTGCAGACGATGGTGCTTTAGTAGCGCTAGCCTAGCTAGTATAGGTATATGTATATGTATATCTCTATGTATATACATGCATGGTGGTGGTTTTGAGTGATTGTTAAAAA] [+] EMBL AK106333 [GCGCTTAGGCTTAGCTAGTACTAATCATCATTAGTGTATAGCTAAGCTAGCTCCATTTCTTGCGCTTCTTGGTTTTGTCTGGGAACTATTGTATAGGTCTATATCGATCTCCATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGCATCCACCAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGCTGCGAGTTTCATCGCCGGCGGCGGCGGCGACAATGCGTGCTTCGACGAGCTCATGGCGGGAGGGTCGTCGGGTGACACTAGGATGGTGGCCATGGACGACGGCGACGACGGGAGTGGCTTCTTGGTGGGGGACGCCGAGGCCGAGCACCTGATGCTGTCGTCCTCGTCGCCGTCGTCGCTCTCCTCGGGCCGCTCCCTCTCCATCGACAGCGCCGGCTCCATGTCCTCCTTCTCGCTCGACGCCGCCGCGGCGCTGGCGATGTCGACCCTCGCCGTCCCGCACCCGTACCCGCCGCCCGTCGCGCACGGCATGTTCGCCTCCGGCGACGGTGGCGGCGGCGGCGGCGGCGCAGTCGACGACCACGAGGACGCCATCATGCGTGCCATGATGGCCGTCATCTCCTCCGCCTCGGCCTCCCCCTCCTCCTCGGGCGGCTCCGCCTCCTCGCCCACCCCGTTCAGCCGGGACAGCGGCGCGCACCACCAGCCTGCAGGTCAGCCAGCCATGGCGGCGCCGCAGCAGCCGCGTGGAGGGAACGGCGGCCACGTGGTGGTGAAGAGCAGCAGCAGCAGCGGCGGCCTCGCCGTGCCGATGGATCAGAAGCCCGGCGGCGGCGGGCGGGGACGGCAGCAGGAGGAGGCGGCGGCGGCGAGCGCCACCAACAGCAGCCAGCTCTACCACATGATGTCGGAGAGGAAGAGGAGGGAGAAGCTCAACGACAGCTTCCACACGCTCAGATCACTCCTCCCACCTTGCTCCAAGAAGGACAAGACGACGGTGCTGATCAACGCGGCCAAGTACCTCAAGTCGCTGGAGACGGAGATCACGGAGCTGGAAGGGACGAACACGAAGCTGGAGAAGCACATCGCCGGCGGCGGCGGCGCGGCGGACGCCGCCATGAGGGCTCGCCGGGCGCAGCAGAGGGCCAAGGTGCAGATCAGCAAGGCGGCGGACTCGCAGTCGCAGCAGCTGGTGAGCCTGACGGTGATGGTGA TGGTGGAGTGC G ACG TGGT GGAGCTGGTGCT CCAC ATCCTGGAAT GCCTC AGGT GGATG AAGG AGATCAGCGTGCTGTCCGTCTACGCCGACACCTACTCGCCGCAGCTTCTTCTCAAGGCCATCGCCAACATCAAGCTCCAGATCGTGGGAGGAGATTGGAACGAGGCGTCGTTCCA CGAGGCGATGACGAAGGCGGCGAACGACGCGACCA TTTCCTGCGCCCCGCTCGCGATCACGGCAGCAC AGTGATTGCTGATTAGTGAGTGATTAGCAGCGAGCGGCGGCGGTGGCGACCTACCGGTTAATTCAATCCATCCTCATCGTCCTCGCGCGCGTGCAGTCATGGTTGAACGTTGAA GCAGTAAAAAAAATATTTATGTATGGAGGGCGATGGGTTCGCTACGTCATAACCGATCTCAATAGTTGGAGGAGGAAAACGAGGACAATTCAAATACTTCGAGAGTGGGGAAGAATATTGTTAGATATATATTAGGGTTTGGTTATTCATTCCTTTTTCCGTCTTAAAATATAATAAGTTTTGATGATGTATAAACATGTATAAATATATAGCTAAAAGTTATTATATTTTAGGACGGTGATAGTAATTACGTAGCGTATTTTTCAGGTGTGCCCTAGTTGCAGCCGCAAGCTAGGTTGCAGACGATGGTGCTTTAGTAGCGCTAGCCTAGCTAGTATAGGTATATGTATATGTATATCTCTATGTATATACATGCATGGTGGTG ] [+] EMBL C25973 [ TGTATAGCTAAGCTAGCTCCATTTCTTGCGCTTCTTGGTTTTGTCTGGGAACTATTGTATAGGTCTATATCGATCTCCATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGNATCCACCAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGCTGCGAGTTTCATCGCCGGCGGGGGCGGCGACAATACGTGTTTCGACGAGCTCATGGCGGGAGGGTCGTCGGGTGACACTAGGATGGTGGNCATGGACGACGGCGACGACGGGAGTGGCTTCTTTGTGGGGGACGCCGAGG ] [+] EMBL CB640876 [ CTAAGCTAGCTCCATTTCTTGCGCTTCTTGGTTTTGTCTGGGAACTATTGTATAGGTCTATATCGATCTCCATGGATGAGGTGTGGTGCAGCCTGGACAGCATGCCGGCCGACATCGCCGCCGGCATCCACCAGCCGCCGCCGCCCGACCTCCACGACCCCTCCTTCTGGCCGGCTTTCGCCGACTGTGCTGCGAGCTTCATCGCCGGCGGCGGCGGCGACAATGCGTGCTTCGACGAGCTCATGGCGGGAGGGTCGTCGGGTGACACTAGGATGGTGGCCATGGACGACGGCGACGACGGGAGTGGCTT ] [+] EMBL BM038927 [ tgtATGGTAATTGGTGGAGTGCCAGAACGTTGGTGGGACCTGGTGCTCCCACAATCCTGGAATCCCCTCCAAGGTGGGATGAAAGGNAGATCAGC GCTTCCCGTTTACCCGGACACCTACTC CC CA CTTCTTCTCAAGGCCATCGCCAACATCAAGCTCCAGATC TGGGAGGAGATTGGAACGAGGCGTCGTTCCACNCGAGGCGATGACGAAGGCGGCGAACGACGCGACCACTTTCCAGCGCCCCGCTCGCGATCACGGCAGCACNNGTGATTGCTGATTAGTGAGTGATTAGCAGCGAGCGGCGGCGGTGGCGACCTACCGGTTAATTCAATCCATCCTCATCGTCCTCGCGCGCGTGCAGTCATGGTTGAACGTTGAACCCAGTAAAAAAAATATTTATGTATGGAGGGCGATGGGTTCGCTACGTCATAACCGATCTCCATAGTTGGAGGAGGAAAACGAGGCCCATTCCAATACTTCGAGAGTGGGGAAGAATATTGTTAGATATATATTAGGGTTTGGTTATTCATTCCTTTTTCCGTCTTAAAATATAATAAGTTTTGATGATGTATAAACATGTATAAATATATAGCTAAAAGTTATTATATTTTAaaaaaaaaa ] [+] EMBL AU078741 [ TTCAANTACTTCGAGAGTGGGGAAGAATATTGTTAGATATATATTAGGGTTTGGTTATTCATTCCTTTNTCCGTCTTACAATATAATAAGTTTTGATGATGTATAAACATGTATAAATATATAGCTAAAAGTTATTATATTTTAGGACGGTGATAGTAATTACGTAGCGTATTTTTCAGGTGTGCCCTAGTTGCAGCCGCAAGCTAGGTTGCAGNNGATGGTGCTTTAGTAGCGCTAGCCTAGCTAGTATAGGTATATGTATATGTATATNTCTATGTATATACATGCATGGTGGTGGTTTTGAGTGATTGTTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||