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Oryza sativa
cluster # 7667 cluster # 7667       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7667#0 length = 1133 sequences # 5  

consensusID : consensus_7667#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1133
fasta sequence
                              [TGGTCGTCGTCGACTCGCCCGCACGCACACGCCCGCGGCCGAGCCACTCTTCTCCGCACGCGGTGCCCGTCTGCTACTCTGCCGTGTTGGCCGCCGCGCCCACCTTTCCTCCCCCGCCCCTTTCCGCTAAAGCCGCCGTGTTCATCGCGTCGGCGACCTACCTACCTACCCTCCTTACTCCGAACTCAGGCAGGCTCTCGTCTCTTCTTCCTCCCTCCTCCCTCTCTCGCCCCAAGCCCTAAATGGCGGCGCAGGGGATCGCGGAGGCGGTGCAGGCCTACACGGGCCTCTCCCCGGCGGCGGCCGTCACCATCCTGGCCCTCATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCGTCGCCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGGGCGAGATCACGCTCGAGCAGCTCGCGGCCTACGACGGCAAGGACCCCGCGAAGCCGATCCTCATCGCCATCCGCGGCCAGGTCTACGACGTCACGCGCGGGAGGCTCTTTTATGGTCCTCAAGGACCATATTCCTTGTTTGCTGGGAGGGATGCAACTCGGGCCCTTGCATTGATGTCGTTTGACCCTATTGACCTCACTGGAGATTTGGATGGCCTTGGTCCAGACGAGCTAGAGGTCTTGCAAGATTGGGAAGATAAGTTTAAAGAGCGGTATCCTACGGTGGGCCACCTTGCTTCAGAAAATGCAGCGGATGGTAACCACGGTGGCGCAGCTTGATCACGAGGAAGGAATGCTTTACTCCATCGGTTTGTCAGTTTCTCTGTTCTTTTTTACTGGATTGCAAGTGGGTAGATCTGATCATATGATGCTCTGGTAGGCTCTGTTGCTTGTGTGCTGTTGTCGTGCGTGACTAATGTACCAGCTTTCCCCATCTGCTTTTATTTTGGTTTGCAGTGGATGAGGAGGAAATTTTGAGCGACTTGACTAAAAACTTGAGCTGTGACTCTCTTGAGTGCTCAGACCATGTGTATATGCTTTCAAGTTTATGCCATAATTTGCGGCTTACTTCTCGCAAGTCGCAACAATTAAAAA]

[+] EMBL AK103653             [TGGTCGTCGTCGACTCGCCCGCACGCACACGCCCGCGGCCGAGCCACTCTTCTCCGCACGCGGTGCCCGTCTGCTACTCTGCCGTGTTGGCCGCCGCGCCCACCTTTCCTCCCCCGCCCCTTTCCGCTAAAGCCGCCGTGTTCATCGCGTCGGCGACCTACCTACCTACCCTCCTTACTCCGAACTCAGGCAGGCTCTCGTCTCTTCTTCCTCCCTCCTCCCTCTCTCGCCCCAAGCCCTAAATGGCGGCGCAGGGGATCGCGGAGGCGGTGCAGGCCTACACGGGCCTCTCCCCGGCGGCGGCCGTCACCATCCTGGCCCTCATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCGTCGCCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGGGCGAGATCACGCTCGAGCAGCTCGCGGCCTACGACGGCAAGGACCCCGCGAAGCCGATCCTCATCGCCATCCGCGGCCAGGTCTACGACGTCACGCGCGGGAGGCTCTTTTATGGTCCTCAAGGACCATATTCCTTGTTTGCTGGGAGGGATGCAACTCGGGCCCTTGCATTGATGTCGTTTGACCCTATTGACCTCACTGGAGATTTGGATGGCCTTGGTCCAGACGAGCTAGAGGTCTTGCAAGATTGGGAAGATAAGTTTAAAGAGCGGTATCCTACGGTGGGCCACCTTGCTTCAGAAAATGCAGCGGATGGTAACCACGGTGGCGCAGCTTGATCACGAGGAAGGAATGCTTTACTCCATCGGTTTGTCAGTTTCTCTGTTCTTTTTTACTGGATTGCAAGTGGGTAGATCTGATCATATGATGCTCTGGTAGGCTCTGTTGCTTGTGTGCTGTTGTCGTGCGTGACTAATGTACCAGCTTTCCCCATCTGCTTTTATTTTGGTTTGCAGTGGATGAGGAGGAAATTTTGAG                                                                                                                    ]
[+] EMBL AU173307             [                                                       GCACGCGGTGCCCGTCTGCTACTCTGCCGTGTTGGCCGCCGCGCCCACCTTTCCTCCCCCGCCCCTTTCCGCTAAAGCCGCCGTGTTCATCGCGTCGGCGACCTACCTACCTACCCTCCTTACTCCGAACTCAGGCAGGCTCTCGTCTCTTCTTCCTCCCTCCTCCCTCTCTCGCCCCAAGCCCTAAATGGCGGCGCAGGGGATCGCGGAGGCGGTGCAGGCCTACACGGGCCTCTCCCCGGCGGCGGCCGTCACCATCCTGGCCCTCATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCGTCGNCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGGGCGAGATCACGCTCGAGCAGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU184378             [                                                       GCACGCGGTGCCCGTCTGCTACTCTGCCGTGTTGGCCGCCGCGCCCACCTTTCCTCCCCCGCCCCTTTCCGCTAAAGCCGCCGTGTTCATCGCGTCGGCGACCTACCTACCTACCCTCCTTACTCCGAACTCAGGCAGGCTCTCGTCTCTTCTTCCTCCCTCCTCCCTCTCTCGCCCCAAGCCCTAAATGGCGGCGCAGGGGATCGCGGAGGCGGTGCAGGCCTACACGGGCCTCTCCCCGGCGGCGGCCGTCACCATCCTGGCCCTCATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCGTCGCCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGGGCGAGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU184379             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCAGACGAGCTAGAGGTCTTGCAAGATTGGGAAGATAAGTTTAAAGAGCGGTATCCTACGGTGGGCCACCTTGCTTCAGAAAATGCAGCGGATGGTAACCACGGTGGCGCAGCTTGATCACGAGGAAGGAATGCTTTACTCCATCGGTTTGTCAGTTTCTCTGTTCTTTTTTACTGGATTGCAAGTGGGTAGATCTGATCATATGATGCTCTGGTAGGCTCTGTTGCTTGTGTGCTGTTGTCGTGCGTGACTAATGTACCAGCTTTCCCCATCTGCTTTTATTTTGGTTTGCAGTGGATGAGGAGGAAATTTTGAGCGACTTGACTAAAAACTTGAGCTGTGACTCTCTTGAGTGCTCAGACCATGTGTATATGCTTTCAAGTTTATGCCATAATTTGCGGCTTACTTCTCGCAAGTCGCAACAATTAAAAA]
[+] EMBL AU173308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGACGAGCTAGAGGTCTTGCAAGATTGGGAAGATAAGTTTAAAGAGCGGTATCCTACGGTGGGCCACCTTGCTTCAGAAAATGCAGCGGATGGTAACCACGGTGGCGCAGCTTGATCACGAGGAAGGAATGCTTTACTCCATCGGTTTGTCAGTTTCTCTGTTCTTTTTTACTGGATTGCAAGTGGGTAGATCTGATCATATGATGCTCTGGTAGGCTCTGTTGCTTGTGTGCTGTTGTCGTGCGTGACTAATGTACCAGCTTTCCCCATCTGCTTTTATTTTGGTTTGCAGTGGATGAGGAGGAAATTTTGAGCGACTTGACTAAAAACTTGAGCTGTGACTCTCTTGAGTGCTCAGACCATGTGTATATGCTTTCAAGTTTATGCCATAATTTGCGGCTTACTTCTCGCAAGTCGCAACAATTAAAAA]


>consensus_7667#0 TGGTCGTCGTCGACTCGCCCGCACGCACACGCCCGCGGCCGAGCCACTCTTCTCCGCACG CGGTGCCCGTCTGCTACTCTGCCGTGTTGGCCGCCGCGCCCACCTTTCCTCCCCCGCCCC TTTCCGCTAAAGCCGCCGTGTTCATCGCGTCGGCGACCTACCTACCTACCCTCCTTACTC CGAACTCAGGCAGGCTCTCGTCTCTTCTTCCTCCCTCCTCCCTCTCTCGCCCCAAGCCCT AAATGGCGGCGCAGGGGATCGCGGAGGCGGTGCAGGCCTACACGGGCCTCTCCCCGGCGG CGGCCGTCACCATCCTGGCCCTCATGCTCGCCACCTACCTCCTCGTGTCCTCCCTGTTCG TCGCCCCGGACGCCGCGCCCCCCAAGCCGCCTCCGCAGCGGAAGGAGGAAGAGCAGCAGC AGCAGCAGGAGGAGGAGGAGGCGGGGGCGTTTGTGCCTTATCCGGACCCTGTACAGGTGG GCGAGATCACGCTCGAGCAGCTCGCGGCCTACGACGGCAAGGACCCCGCGAAGCCGATCC TCATCGCCATCCGCGGCCAGGTCTACGACGTCACGCGCGGGAGGCTCTTTTATGGTCCTC AAGGACCATATTCCTTGTTTGCTGGGAGGGATGCAACTCGGGCCCTTGCATTGATGTCGT TTGACCCTATTGACCTCACTGGAGATTTGGATGGCCTTGGTCCAGACGAGCTAGAGGTCT TGCAAGATTGGGAAGATAAGTTTAAAGAGCGGTATCCTACGGTGGGCCACCTTGCTTCAG AAAATGCAGCGGATGGTAACCACGGTGGCGCAGCTTGATCACGAGGAAGGAATGCTTTAC TCCATCGGTTTGTCAGTTTCTCTGTTCTTTTTTACTGGATTGCAAGTGGGTAGATCTGAT CATATGATGCTCTGGTAGGCTCTGTTGCTTGTGTGCTGTTGTCGTGCGTGACTAATGTAC CAGCTTTCCCCATCTGCTTTTATTTTGGTTTGCAGTGGATGAGGAGGAAATTTTGAGCGA CTTGACTAAAAACTTGAGCTGTGACTCTCTTGAGTGCTCAGACCATGTGTATATGCTTTC AAGTTTATGCCATAATTTGCGGCTTACTTCTCGCAAGTCGCAACAATTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)