These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7675#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1724 fasta sequence [CGCATTTCGTCGAACACCTACCGCGATGCCGCCGACGCCGCCGCCTCTCCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTCCCGCTTCGCCGCGTCCGCATCCTCCTCTTCCGGAGGAGGAGGAGGAGGTAGCAGCAGCGGCGCGCGCACGGCGAGGCCGCCCCCGGCCC-CGCGGCGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTAGGCGGCGGCGCATCCGGCCTCGCCTGCGCCGCCTCCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGACCAGCAGCAGCAGCAGCAGCTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTCCGCGAGTGGGGAGGCTTGATCGGTGAGCTCGACGCCGGCGGCCATTTCAGGCCTATGCCTTCCTCCTCGCCGCCGCGGTACATCGGCGTCGACGGGATGCGGCCGCTTGCAGATGCGATTCTGCCTGAGAGTGACCTAATTGAAGTTGTCCGGCCGTGTTGGATAAGCAAGCTTGAGCCGTTCAATGGCCTGTGGCGCTTGTTTGAGAATGAGAAGCCACATGGTCAATATGATGCAATTGTGATAGCACATAATGGGAAATGTGCCAATCGTCTGCTCTCTACATCAGGTCTACCACTGCTGACAAGACAAATGAAGAGATTACAGCTAAGTTCTGTCTGGGCGCTCCTCGCGGCATTTCAAGATCCTCTACCAATTCCACAAACTGATTCTTATGGAACATTTGAAGGAGCATTTGTGAAAGATGTTGATTCTCTCTCTTGGATGGCCAACAATACTCAGAAACTTTTCCCCTTGCAGACTGGCAGACCCGAGTGCTGGACATTTTTCAGCACTGCTGCTTATGGAAAAAGAAACAAAGTTCCGCAGGAAAACATTCCAAAGATCACGGCGGAAAAGGTGAAGGAAGACATGCTTAGAGGTGTAGAGCTTGCTTTAGGGCTATCAAGAGGATCTCTTCAGCAACCATTTTACACGAGAGTACAATTGTGGGGTGCAGCTCTACCAATGAACACTCCAGGAGTCCCATGCATATTTGATCCCCAAGGGAGAGCAGGCATCTGTGGTGACTGGCTAACAGGTTCAAGCATAGAAGCGGCTGTGTTAAGCGGAATGTCTCTTGCAAACCATATCGCTGACTACTTTGCAAGCAGTGGTGAACAACCAGAGGAGTTTGCAATTGGTTTGCATGAGAACTTGAGCCAGGTTGAAGGTCATGATATTGGTCAGTTCCCAGGTTTAGAGAGTCAGAAACCGCATGTAGCTGAAGCTCAGCTAACACCGAGCACATGATTTTTCTTTTGTTAGTTCTGTACTGGTAATTTCTGTAGCATGTAAATGATGAGCTGATTCTTTTGTTGCACAGAACGTGTATGTTGTAAACCGCAAAAATGTATATCAACCATGTATATGTAGAAATTTTTGAAGCTCTTCGAATGTTTCATCTACCTGGTGTTTGGAAGTACATCTGGATGTTTGGAAGGCTATATATATATAT] [+] EMBL AK071949 [CGCATTTCGTCGAACACCTACCGCGATGCCGCCGACGCCGCCGCCTCTCCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTCCCGCTTCGCCGCGTCCGCATCCTCCTCTTCCGGAGGAGGAGGAGGAGGTAGCAGCAGCGGCGCGCGCACGGCGAGGCCGCCCCCGGCCC CGCGGCGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTAGGCGGCGGCGCATCCGGCCTCGCCTGCGCCGCCTCCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGACCAGCAGCAGCAGCAGCAGCTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTCCGCGAGTGGGGAGGCTTGATCGGTGAGCTCGACGCCGGCGGCCATTTCAGGCCTATGCCTTCCTCCTCGCCGCCGCGGTACATCGGCGTCGACGGGATGCGGCCGCTTGCAGATGCGATTCTGCCTGAGAGTGACCTAATTGAAGTTGTCCGGCCGTGTTGGATAAGCAAGCTTGAGCCGTTCAATGGCCTGTGGCGCTTGTTTGAGAATGAGAAGCCACATGGTCAATATGATGCAATTGTGATAGCACATAATGGGAAATGTGCCAATCGTCTGCTCTCTACATCAGGTCTACCACTGCTGACAAGACAAATGAAGAGATTACAGCTAAGTTCTGTCTGGGCGCTCCTCGCGGCATTTCAAGATCCTCTACCAATTCCACAAACTGATTCTTATGGAACATTTGAAGGAGCATTTGTGAAAGATGTTGATTCTCTCTCTTGGATGGCCAACAATACTCAGAAACTTTTCCCCTTGCAGACTGGCAGACCCGAGTGCTGGACATTTTTCAGCACTGCTGCTTATGGAAAAAGAAACAAAGTTCCGCAGGAAAACATTCCAAAGATCACGGCGGAAAAGGTGAAGGAAGACATGCTTAGAGGTGTAGAGCTTGCTTTAGGGCTATCAAGAGGATCTCTTCAGCAACCATTTTACACGAGAGTACAATTGTGGGGTGCAGCTCTACCAATGAACACTCCAGGAGTCCCATGCATATTTGATCCCCAAGGGAGAGCAGGCATCTGTGGTGACTGGCTAACAGGTTCAAGCATAGAAGCGGCTGTGTTAAGCGGAATGTCTCTTGCAAACCATATCGCTGACTACTTTGCAAGCAGTGGTGAACAACCAGAGGAGTTTGCAATTGGTTTGCATGAGAACTTGAGCCAGGTTGAAGGTCATGATATTGGTCAGTTCCCAGGTTTAGAGAGTCAGAAACCGCATGTAGCTGAAGCTCAGCTAACACCGAGCACATGATTTTTCTTTTGTTAGTTCTGTACTGGTAATTTCTGTAGCATGTAAATGATGAGCTGATTCTTTTGTTGCACAGAACGTGTATGTTGTAAACCGCAAAAATGTATATCAACCATGTATATGTAGAAATTTTTGAAGCTCTTCGAATGTTTCATCTACCTGGTGTTTGGAAGTACATCTGGATGTTTGGAAGGCTATATATATATAT] [+] EMBL AK099006 [ TTCGTCGAACACCTACCGCGATGCCGCCGACGCCGCCGCCTCTCCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTACCGCTTCGCCGCGTCCGCATCCTCCTCTTCCGGAGGAGGAGGAGGAGGTAGCAGCAGCGGCGCGCGCACGGCGAGGCCGCCCCCGGCCC CGCGGCGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTAGGCGGCGGCGCATCCGGCCTCGCCTGCGCCGCCTCCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAGGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGACCAGCAGCAGCAGCAGCAGCTGGTGTTCGACCACGCGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTCCGCGAGTGGGGAGGCTTGATCGGTGAGCTCGACGCCGGCGGCCATTTCAGGCCTATGCCTTCCTCCTCGCCGCCGCGGTACATCGGCGTCGACGGGATGCGGCCGCTTGCAGATGCGATTCTGCCTGAGAGTGACCTAATTGAAGTTGTCCGGCCGTGTTGGATAAGCAAGCTTGAGCCGTTCAATGGCCTGTGGCGCTTGTTTGAGAATGAGAAGCCACATGGTCAATATGATGCAATTGTGATAGCACATAATGGGAAATGTGCCAATCGTCTGCTCTCTACATCAGGTCTACCACTGCTGACAAGACAAATGAAGAGATTACAGCTAAGTTCTGTCTGGGCGCTCCTCGCGGCATTTCAAGATCCTCTACCAATTCCACAAACTGATTCTTATGGAACATTTGAAGGAGCATTTGTGAAAGATGTTGATTCTCTCTCTTGGATGGCCAACAATACTCAGAAACTTTTCCCCTTGCAGACTGGCAGACCCGAGTGCTGGACATTTTTCAGCACTGCTGCTTATGGAAAAAGAAACAAAGTTCCGCAGGAAAACATTCCAAAGATCACGGCGGAAAAGGTGAAGGAAGACATGCTTAGAGGTGTAGAGCTTGCTTTAGGGCTATCAAGAGGATCTCTTCAGCAACCATTTTACACGAGAGTACAATTGTGGGGTGCAGCTCTACCAATGAACACTCCAGGAGTCCCATGCATATTTGATCCCCAAGGGAGAGCAGGCATCTGTGGTGACTGGCTAACAGGTTCAAGCATAGAAGCGGCTGTGTTAAGCGGAATGTCTCTTGCAAACCATATCGCTGACTACTTTGCAAGCAGTGGTGAACAACCAGAGGAGTTTGCAATTGGTTTGCATGAGAACTTGAGCCAGGTTGAAGGTCATGATATTGGTCAGTTCCCAGGTTTAGAGAGTCAGAAACCGCATGTAGCTGAAGCTCAGCTAACACCGAGCACATGATTTTTCTTTTGTTAGTTCTGTACTGGTAATTTCTGTAGCATGTAAATGATGAGCTGATTCTTTTGTTGCACAGAACGTGTATGTTGTAAACCGCAAAAATGTATATCAACCATGTATATGTAGAAATTTTTGAAGCTCTTCGAA ] [+] EMBL CB639048 [ CGAACACCTACCGCGATGCCGCCGACGCCGCCGCCTCTCCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTCCCGCTTCGCCGCGTCCGCATCCTCCTCTTCCGGAGGAGGAGGAGGAGGTAGCAGCAGCGGCGCGCGCACGGCGAGGCCGCCCCCGGCCC CGCGGCGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCAGGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTAGGCGGCGGCGCATCCGGCCTCGCCTGCGCCGCCTCCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGGGATGCACGGGCTAAGAGGGAGGATGGCGACGAGAGCTATCGCCGCCGCCGGCGACCAGCAGCAGCAGCAGCAGCTGGTGTTCGACCACCGGGCGCAGTTCTTCACCGCGAGCGACGAGAGGTTCAAGAGGGTGGTCGACGAGTGGATGGACAAGGGCTTGGTCCGCGAGTGGGGAGGCTTGATCGGTGAGCTCGACG ] [+] EMBL CB639050 [ CGCGATGCCGCCGACGCCGCCGCCTCTTCTCCTCCCGGCGCCACGCTGCCCACGCTCTACCGCCGTGCTGGCGGCGTCCCGCTTCGCCGCGTCCGCATCCTGCTCTTCCGGAGGAGGAGGAGGAGGTATCAGCAGCCGCGCGCGCACGGCGAGGCCGCCCCCGGCCCTTTTTGTGGCGGCGCGGCAAGCCCGGGTTCTCGCGGCAGTCCGCCATCAAGAAGAGCTTCCACCATGAGCAGGTGGTGTTCTCCACGCCTGTTCCCCCCGACCCATCCGTCGCCGTCGTATGCGGCGGCGCATCCAGCCTTGCCTGCGCCGCCTGCCTCGCCGCCCGCGGCGTCCGCGCCGTCGTCTTCGACACGGG ] [-] EMBL CB639049 [ TGCTGGACATTTTTCAGCACTGCTGCTTATGGAAAAAGAAACAAAGTTCCGCAGGAAAACATTCCAAAGATCACGGCGGAAAAGGTGAAGGAAGACATGCTTAGAGGTGTAGAGCTTGCTTTAGGGCTATCAAGAGGATCTCTTCAGCAACCATTTTACACGAGAGTACAATTGTGGGGTGCAGCTCTACCAATGAACACTCCAGGAGTCCCATGCATATTTGATCCCCAAGGGAGAGCAGGCATCTGTGGTGACTGGCTAACAGGTTCAAGCATAGAAGCGGCTGTGTTAAGCGGAATGTCTCTTGCAAACCATATCGCTGACTACTTTGCAAGCAGTGGTGAACAACCAGAGGAGTTTGCAATTGGTTTGCATGAGAACTTGAGCCAGGTTGAAGGTCATGATATTGGTCAGTTCCCAGGTTTAGAGAGTCAGAAACCGCATGTAGCTGAAGCTCAGCTAACACCGAGCACATGATTTTTCTTTTGTTAGTTCTGTACTGGTAATTTCTGTAGCATGTAAATGATGAGCTGATTCTTTTGTTGCACAGAACGTGTATGTTGTAAACCGCAAAAATGTATATCAACCATGTATATGTAGAAA TTTTAAAG TCTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||