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Oryza sativa
cluster # 7709 cluster # 7709       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7709#0 length = 1627 sequences # 1  
consensus_7709#1 length = 572 sequences # 1  
consensus_7709#2 length = 557 sequences # 2  
consensus_7709#3 length = 546 sequences # 1  

consensusID : consensus_7709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1627
fasta sequence
                              [CTGCCCGGAGCTTGGCTGTGGAGGCGGCCATGGCGCGGGTGGGCAAGCACGGCGAGTCGTCGCCGCCGTCCGACCGTAGGCCGCTCCACTTCGCGGCGTTCCTGCTGCTCGCCGACGCGGCGCTCGTCGCCCTCATCGTCGTCTTCGTCCCGTATACCAAGATCGACTGGGACGCGTACATGGCTCAGGTGGACGCGTTTGTGGAAGGGGAGAGGGATTACACCAAGATCGAGGGCGACACGGGGCCGCTCGTCTACCCGGCCGGCTTCCTCTACGTTTACTCCGCCATCAAGCTTCTCACCGCCGGCCAAGTCTTCCCCGCGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTTAGCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCCTGGTTTGCTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTAGTTCAAGCAGGACAATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGACTGATGTGTGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTGGGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCCGCCTTTTCAACGATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCACAAGTGGTACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATGTGCTTCTTTTTGCTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAGTCTTCTTTGCTTTATTAGGGGCTGCAGCACTACAGGTTTTGTTGGGTATGCCATTCTTGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAATTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAACGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAATTTTATTCCTGAGTACCCCTATGCCAATGGAAAGAAATGAAAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCTTGTTATACAGGCAAGATCAAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTGCTGTCAGTAGGCTCTAGTTTCCTGGATGATCATTTCGTCCTACCGAACATGTACCATAGATAACTTGTTAACAACATAGCAGCTGCTCTGGCAATTCTTTGTACGTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAGATCTCTG]

[+] EMBL AK068405             [CTGCCCGGAGCTTGGCTGTGGAGGCGGCCATGGCGCGGGTGGGCAAGCACGGCGAGTCGTCGCCGCCGTCCGACCGTAGGCCGCTCCACTTCGCGGCGTTCCTGCTGCTCGCCGACGCGGCGCTCGTCGCCCTCATCGTCGTCTTCGTCCCGTATACCAAGATCGACTGGGACGCGTACATGGCTCAGGTGGACGCGTTTGTGGAAGGGGAGAGGGATTACACCAAGATCGAGGGCGACACGGGGCCGCTCGTCTACCCGGCCGGCTTCCTCTACGTTTACTCCGCCATCAAGCTTCTCACCGCCGGCCAAGTCTTCCCCGCGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTTAGCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCCTGGTTTGCTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTAGTTCAAGCAGGACAATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGACTGATGTGTGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTGGGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCCGCCTTTTCAACGATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCACAAGTGGTACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATGTGCTTCTTTTTGCTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAGTCTTCTTTGCTTTATTAGGGGCTGCAGCACTACAGGTTTTGTTGGGTATGCCATTCTTGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAATTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAACGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAATTTTATTCCTGAGTACCCCTATGCCAATGGAAAGAAATGAAAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCTTGTTATACAGGCAAGATCAAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTGCTGTCAGTAGGCTCTAGTTTCCTGGATGATCATTTCGTCCTACCGAACATGTACCATAGATAACTTGTTAACAACATAGCAGCTGCTCTGGCAATTCTTTGTACGTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAGATCTCTG]


>consensus_7709#0 CTGCCCGGAGCTTGGCTGTGGAGGCGGCCATGGCGCGGGTGGGCAAGCACGGCGAGTCGT CGCCGCCGTCCGACCGTAGGCCGCTCCACTTCGCGGCGTTCCTGCTGCTCGCCGACGCGG CGCTCGTCGCCCTCATCGTCGTCTTCGTCCCGTATACCAAGATCGACTGGGACGCGTACA TGGCTCAGGTGGACGCGTTTGTGGAAGGGGAGAGGGATTACACCAAGATCGAGGGCGACA CGGGGCCGCTCGTCTACCCGGCCGGCTTCCTCTACGTTTACTCCGCCATCAAGCTTCTCA CCGCCGGCCAAGTCTTCCCCGCGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTTA GCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCCTG GTTTGCTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTAGTTCAAGCAGGACAATTT GATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGACTGATGTGTGCCT AATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTGGGCTT TAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCCGCCTTTTCAACG ATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCACAAGTGGT ACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATGTGCTTCTTTTTG CTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAGTCTTCTTTGCTT TATTAGGGGCTGCAGCACTACAGGTTTTGTTGGGTATGCCATTCTTGTTATCACATCCAG TTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAA ATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGG TTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTG GCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAATTGGACAGTTAATTT TTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAACGGTCATGTTTGTTG GAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAATTTTATTCCTGAGTAC CCCTATGCCAATGGAAAGAAATGAAAAAACAGTATCGACAAGCACGGCACGGCAATATCA TACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCTTGTTATACAGGCAAGATC AAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAAT GCTCTTGCTGTCAGTAGGCTCTAGTTTCCTGGATGATCATTTCGTCCTACCGAACATGTA CCATAGATAACTTGTTAACAACATAGCAGCTGCTCTGGCAATTCTTTGTACGTCCATTGA GTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAG ATCTCTG



consensusID : consensus_7709#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence
                              [TTTTGTTGGGTATGCCATTCTTGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAATTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAACGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAATTTTATTCCTGGTACTTCTATTCACTGCCTTTCCTTTTGTGGAAAACTCGTTTTCCAACATTTGTGAGGGTCATTTTATTTCTTGCTGTGGAGCTCTGCTGGAATATCTATCCTTCCACTGCCTATTCGTCACTGCTGTTGCTATTCATTCACATCTCCATCTTGTTTGGCTTATGGAGCTCACCTGCAGAG]

[+] EMBL CF326261             [TTTTGTTGGGTATGCCATTCTTGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAATTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAACGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAATTTTATTCCTGGTACTTCTATTCACTGCCTTTCCTTTTGTGGAAAACTCGTTTTCCAACATTTGTGAGGGTCATTTTATTTCTTGCTGTGGAGCTCTGCTGGAATATCTATCCTTCCACTGCCTATTCGTCACTGCTGTTGCTATTCATTCACATCTCCATCTTGTTTGGCTTATGGAGCTCACCTGCAGAG]


>consensus_7709#1 TTTTGTTGGGTATGCCATTCTTGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCA ATCTTGGGCGTGTCTTCATCCATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGT TCTTTGTATCAAAAGAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGG TCTTTGCACACTACAAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCA GATTCAAAGATGCCACATCAATTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTC TTAACAAAGAACATATTGTAACGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCG CACGATCATTACACTACCAATTTTATTCCTGGTACTTCTATTCACTGCCTTTCCTTTTGT GGAAAACTCGTTTTCCAACATTTGTGAGGGTCATTTTATTTCTTGCTGTGGAGCTCTGCT GGAATATCTATCCTTCCACTGCCTATTCGTCACTGCTGTTGCTATTCATTCACATCTCCA TCTTGTTTGGCTTATGGAGCTCACCTGCAGAG



consensusID : consensus_7709#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 557
fasta sequence
                              [CTCGTTTTCCAACATTTGTGGAGGGTCATTTTATTTCTTGGCTGTGGAGCTTCTGCTGGGAATATGCTGATGCCTTCCACTGCCTGATGTGCGTCACTGGCTGTTGCTGATTGCATTCACATCTCCATCTTGGTTTGGGCTTATGGAGCTGCACCTGCAGAGTACCCCTGATGCCACATGGAAAGAAATGACAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCT-TGT-TATACAGGCCAGATCACAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTCCTGTCAGTAGGCTTTAGTTTCCTGGCATGATCATTTCGTCCTACCGAACATGTACCATAGATAACTTCGTTAACAAACT-TAACATAGCAGCTGCTCTGCCAAAAAAAAAAACGTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAGATCTCTGGCATTGTGGAAAAA]

[+] EMBL BI801847             [CTCGTTTTCCAACATTTGTGGAGGGTCATTTTATTTCTTGGCTGTGGAGCTTCTGCTGGGAATATGCTGATGCCTTCCACTGCCTGATGTGCGTCACTGGCTGTTGCTGATTGCATTCACATCTCCATCTTGGTTTGGGCTTATGGAGCTGCACCTGCAGAGTACCCCTGATGCCACATGGAAAGAAATGACAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCT TGT TATACAGGCCAGATCACAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTCCTGTCAGTAGGCTTTAGTTTCCTGGCATGATCATTTCGTCCTACCGAACATGTACCATAGATAACTTCGTTAACAAACT TAACATAGCAGCTGCTCTGCCAAAAAAAAAA                                                                                            ]
[+] EMBL BQ907621             [                                                                                                                                              ATGGAGCT CACCTGCAGAGTACCCCT ATGC  CATGGAAAGAAATGAAAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCTGTGTGTATACAGGCAAGATCA AGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTGCTGTCAGTAGGCTCTAGTTTCCTGG ATGATCATTTCGTCCTACCGAACATGTACCATAGATAACTT GTTAAC AACTGTAACATAGCAGCTGCTCTGGCAATTCTTTGTACGTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAGATCTCTGGCATTGTGGAAAAA]


>consensus_7709#2 CTCGTTTTCCAACATTTGTGGAGGGTCATTTTATTTCTTGGCTGTGGAGCTTCTGCTGGG AATATGCTGATGCCTTCCACTGCCTGATGTGCGTCACTGGCTGTTGCTGATTGCATTCAC ATCTCCATCTTGGTTTGGGCTTATGGAGCTGCACCTGCAGAGTACCCCTGATGCCACATG GAAAGAAATGACAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTAACT TTGAGATAGGCTTTAGTTGTTTCTTCCCTTGTTATACAGGCCAGATCACAGAAGGGGTAT GGAAATCTGAAGTTGTAATTCAACACACTGTATTTTTGATATGTCAATGCTCTTCCTGTC AGTAGGCTTTAGTTTCCTGGCATGATCATTTCGTCCTACCGAACATGTACCATAGATAAC TTCGTTAACAAACTTAACATAGCAGCTGCTCTGCCAAAAAAAAAAACGTCCATTGAGTAC CATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGACAGGCCCAGATCT CTGGCATTGTGGAAAAA



consensusID : consensus_7709#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence
                              [TGTGCTCAGTTGTGCTAAATTTTGATGAGTTGTTGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTTAGCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCCTTGTTTTTTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTATTTTTAGCAGGACAATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGACTGATGTGTGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTGGGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCCGCCTTTTCAACGATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCACAAGTGGTACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATGTGCTTCTTTTTGCTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAGTCTTCT]

[+] EMBL CF306036             [TGTGCTCAGTTGTGCTAAATTTTGATGAGTTGTTGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTTAGCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCCTTGTTTTTTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTATTTTTAGCAGGACAATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGACTGATGTGTGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTGGGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCCGCCTTTTCAACGATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCACAAGTGGTACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATGTGCTTCTTTTTGCTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAGTCTTCT]


>consensus_7709#3 TGTGCTCAGTTGTGCTAAATTTTGATGAGTTGTTGCAGATTTTGTTTGGTGTCCTGTACA TTGTGAACCTTAGCCTTGTTCTGCTGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTG TGTTCTCTCCTTGTTTTTTCTTAGTTTAGCAATACTCATCTGATCACTTTGCTATTTTTA GCAGGACAATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATGAC TGATGTGTGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTC CAAGGTGGGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTCCATCTTTGTGCTCC GCCTTTTCAACGATTGTTTCGCTATGACGTTTCTCCATGCTGCCATGGTTTTGATTATGT ATCACAAGTGGTACCTTGGTCTAGTAATTTTCAGTGCAGCTGTCTCCATTAAGATGAATG TGCTTCTTTTTGCTCCATCGTTATTACTACTGATGCTGAAGGCCATGAGCATCAAAGGAG TCTTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7709#0      CTGCCCGGAGCTTGGCTGTGGAGGCGGCCATGGCGCGGGTGGGCAAGCACGGCGAGTCGT 60
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CGCCGCCGTCCGACCGTAGGCCGCTCCACTTCGCGGCGTTCCTGCTGCTCGCCGACGCGG 120
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CGCTCGTCGCCCTCATCGTCGTCTTCGTCCCGTATACCAAGATCGACTGGGACGCGTACA 180
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TGGCTCAGGTGGACGCGTTTGTGGAAGGGGAGAGGGATTACACCAAGATCGAGGGCGACA 240
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CGGGGCCGCTCGTCTACCCGGCCGGCTTCCTCTACGTTTACTCCGCCATCAAGCTTCTCA 300
consensus_7709#3      -------------------------------------------TGTGCTCAGTTGTGCTA 17
consensus_7709#1      -------------------------------------------TTTTGTTGGGTATGCCA 17
consensus_7709#2      ------------------------------------------------CTCGTTTTCCAA 12
                                                                             *   *

consensus_7709#0      CCGCC-GGCCAAGTCTTCCCCGCGCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTT 359
consensus_7709#3      AATTT-TGATGAGTTGTT-----GCAGATTTTGTTTGGTGTCCTGTACATTGTGAACCTT 71
consensus_7709#1      TTCTTGTTATCACATCCAGTTGAGTACATCTCACG-AGCATTCAATCTTGGGCGTGTCTT 76
consensus_7709#2      CATTTGTGGAGGGTCATTTTATTTCTTGGCT-GTGGAGC-TTCTGCTGGGAATATGCTGA 70
                                                    *      *  * *                 

consensus_7709#0      AGCCTTGTTCTGC-TGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCC 418
consensus_7709#3      AGCCTTGTTCTGC-TGATGTACGTCAAGACTGAAGTGGTAGGGATGCCTGTGTTCTCTCC 130
consensus_7709#1      CATCCATTTCTGG-TC-TGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAA 134
consensus_7709#2      TGCCTTCCACTGCCTGATGTGCGTCACTGGCT-GTTGCTGATTGCATTCACATCTCCATC 129
                         *     ***  *  ***   *              *             *       

consensus_7709#0      TGGTTTGCTCTTAGTTTAGCAATACT-CATCTGATCACTTTGCTAGTTCAAGCAGGACA- 476
consensus_7709#3      TTGTTTTTTCTTAGTTTAGCAATACT-CATCTGATCACTTTGCTATTTTTAGCAGGACA- 188
consensus_7709#1      GAGCTAGCTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTAC 194
consensus_7709#2      TTGGT-----TTGGGCTTATGGAGCTGCACCTGCAGAGT-----ACCCCTG--ATGCCAC 177
                        * *     **    *       ** ** **    * *              *    * 

consensus_7709#0      ATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATG-ACTGATGTG 535
consensus_7709#3      ATTTGATCGAACCGCGGAACTATTTTGGGTTGTATTAAACATCCTCCATG-ACTGATGTG 247
consensus_7709#1      AAGTGGCTTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCC 254
consensus_7709#2      ATGGAAAGAAATGACAAAACAGTATCGACAAGCACGGCACGGCAATATCATACAGTTTTA 237
                      *        **             * *            *           *  * *   

consensus_7709#0      TGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTG 595
consensus_7709#3      TGCCTAATGTTATTTCTGAACCTCCCTGTTTACCCATAATTTTTGACAGCTTCCAAGGTG 307
consensus_7709#1      ACATCAATTGGACAGTTAA---TTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAA 311
consensus_7709#2      ACTTTGAGATAGGCTTTAG--TTGTTTCTTCCCTTGTTATACAGGCCAGATCACAGAAGG 295
                            *         *     *   *           *       *   *  **     

consensus_7709#0      GGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTC-CATCTT-TGTGCTCCGCCTT 653
consensus_7709#3      GGCTTTAGGTTTGCTTTGCTTGTCAAAGAGGGTTCACTC-CATCTT-TGTGCTCCGCCTT 365
consensus_7709#1      CATATTGTAACGGTCATGTTTGTT--GGAAATTTCATTGGCATCGTGTGCGCACGATCAT 369
consensus_7709#2      GGTATGGAAAT--CTGAAGTTGTA--ATTCAACACACTG-TATTTTTGATATGTCAATGC 350
                          *              ****           ** *   **  *              

consensus_7709#0      TTCAACGATTGTTTCGCTA-TGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCA 712
consensus_7709#3      TTCAACGATTGTTTCGCTA-TGACGTTTCTCCATGCTGCCATGGTTTTGATTATGTATCA 424
consensus_7709#1      TACACTACCAATTTTATTCCTGGTACTTCTATTCACTGCCTTTCCTTTTGTGGAAAACTC 429
consensus_7709#2      TCTTCCTGTCAGTAGGCTT-TAGTTTCCTGGCATGATCATTTCGTCCTACCGAACATGTA 409
                      *           *    *  *               *    *     *            

consensus_7709#0      CAAGTGGTACCTTGGTCTAG-TAATTTTCAGTGCAGCTGT----CTCCATTAAGATGAAT 767
consensus_7709#3      CAAGTGGTACCTTGGTCTAG-TAATTTTCAGTGCAGCTGT----CTCCATTAAGATGAAT 479
consensus_7709#1      GTTTTCCAACATTTGTGAGGGTCATTTTATTTCTTGCTGTGGAGCTCTGCTGGAATATCT 489
consensus_7709#2      CCATAGATAACTTCGTTAACAAACTTAACATAGCAGCTGCTC--TGCCAAAAAAAAAAAC 467
                              *  ** **        **         ****       *       *     

consensus_7709#0      GTGCTTCTTTTTGCTCCATCGTTAT--TACTACTGATGCTGAAGGCCATGAGCATCAAAG 825
consensus_7709#3      GTGCTTCTTTTTGCTCCATCGTTAT--TACTACTGATGCTGAAGGCCATGAGCATCAAAG 537
consensus_7709#1      ATCCTTCCACT-GCCTATTCGTCAC--TGCTGTTGCTATTCATTCACATCTCCATCTTGT 546
consensus_7709#2      GTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATATATAGA 527
                       * * *    *  *      ** *   * *      *  * *     *     **     

consensus_7709#0      GAGTCTTCTTTGCTTTATTAGGGGCTGCAGCACTACAGGTTTTGTTGGGTATGCCATTCT 885
consensus_7709#3      GAGTCTTCT--------------------------------------------------- 546
consensus_7709#1      TTGGCTTATGGAGCTCACCTGCAGAG---------------------------------- 572
consensus_7709#2      CAGGCCCAGATCTCTGGCATTGTGGAAAAA------------------------------ 557
                        * *                                                       

consensus_7709#0      TGTTATCACATCCAGTTGAGTACATCTCACGAGCATTCAATCTTGGGCGTGTCTTCATCC 945
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      ATTTCTGGTCTGTAAATTTTAAATTTGTCCCTGAGAAGTTCTTTGTATCAAAAGAGCTAG 1005
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CTGTTGCATTGTTGGTTCTTCACCTCACTACTCTTTTGGTCTTTGCACACTACAAGTGGC 1065
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TTAAGCATGAGGGTGGCTTGTTCCATTTCTTGCATTCCAGATTCAAAGATGCCACATCAA 1125
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TTGGACAGTTAATTTTTGCCAAGCCCAAACTGTCAACTCTTAACAAAGAACATATTGTAA 1185
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CGGTCATGTTTGTTGGAAATTTCATTGGCATCGTGTGCGCACGATCATTACACTACCAAT 1245
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TTTATTCCTGAGTACCCCTATGCCAATGGAAAGAAATGAAAAAACAGTATCGACAAGCAC 1305
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      GGCACGGCAATATCATACAGTTTTAACTTTGAGATAGGCTTTAGTTGTTTCTTCCCTTGT 1365
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TATACAGGCAAGATCAAGAAGGGGTATGGAAATCTGAAGTTGTAATTCAACACACTGTAT 1425
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TTTTGATATGTCAATGCTCTTGCTGTCAGTAGGCTCTAGTTTCCTGGATGATCATTTCGT 1485
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      CCTACCGAACATGTACCATAGATAACTTGTTAACAACATAGCAGCTGCTCTGGCAATTCT 1545
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TTGTACGTCCATTGAGTACCATTGATGTTATCTTGCAGAATATTCTGAAAAATAAAAATA 1605
consensus_7709#3      ------------------------------------------------------------
consensus_7709#1      ------------------------------------------------------------
consensus_7709#2      ------------------------------------------------------------
                                                                                  

consensus_7709#0      TATAGACAGGCCCAGATCTCTG 1627
consensus_7709#3      ----------------------
consensus_7709#1      ----------------------
consensus_7709#2      ----------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)