These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7727#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1424 fasta sequence [GCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACCGGCGACGGCCTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGC-GGATTATACCGAGGCAAATTGCACT-GCATTCGCTGATTTCAAGAGATTGTGGA-TGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGTATGCCTCAAAGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATACAAGCCACATTTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGATTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG--TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAAAAA] [+] EMBL AK108599 [GCTCGCGGAGGCCGGAGCGGAGGAGGAGACGGACGCGGCGGCGGCGCCACCGGCGACGGCCTCTCCTTCGTCTCGTTCTCCGCTCTGCTTGACGGGAGGCGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGC GGATTATACCGAGGCAAATTGCACT GCATTCGCTGATTTCAAGAGATTGTGGA TGGCAAAGAAATTTTCTTATATCTATGAAGGAAGACCTAAGACAAACTCTGGCGCTTTCATGCAGTCGCTCTTTTTGCATTGTATTGGTCATATGACATCTCAGAGTTGTATGCCTCAAAGATTGGCTGGACTTTACTGCCTTTACTGTCTTTACGAATCGCAACCATACAAGCCACATTTCAAGATCTATTTGTCTCTTGAGGAGTTGAAGAAACTCAAGGATTTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGATTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAA ] [+] EMBL AU070240 [ CGGCTCCTCCGCGCGTCCCCCTCTCCGCCGCGGTGACCGGCCGAGGGGTGCTCCGCCCTCCGCTTCTCCCAACCCCGGACGGGGCGCCGCCGAGCCAGTGCTCCCCGACGGCGGCGGCGGCGGCGAGGAACCCGTCCCCGACAGCCGAAACTCGGATCCCAACTAGGAGGAGCTGCAGAAAGCCGGCGTCTCCTACCTCCAACGGCTTCGACTTGACTGCAAAATATGGATCTTTCTCCTTTCAAGTTGGATATTGATGAGCTACTAGCGGGATTATACCGAGGCAAATTGCACTNGCATTCGCTGATTTCAAGAGATTGTGGATTGGCAAAGAAATTTCCTTANAACTATGAAGGAAGACCTAAGA ] [-] EMBL CF325750 [ AAACTCAAGGA TTTGTTGTTGAGGCTAAGCAAAATGGAATGGCTGTTGTACCGTCACTTGTCAAAAGAATGCTGGACAAAGGAATGATTTTGTTTGGATTCATCAATCTACTTGGTGACTCAGGGGTGAAGCAGGTCAATGAGTTAACTGCATCTCAGAATAAGAGAGTGAAATTCGCATGTGACAAGTTGTTTATGAATACTCAGATAGACAGTTATATGCACATGGATTTGGGTTCGGAGCTTGAACTTGATAAGATCAAGAAATCATCGTTGGATTATGCCAAAGCCAAGGAATTGGCATTTGCAGAGGCAAGCAATATTATCGATGTTGAAGATGCTAGGCACATTGTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTA ] [+] EMBL AU173831 [ GTTCAGAATGACAAACTGCTGGGCGACAGGGTAGATGAAATCGTCAAAGAATGGGATGCACAGAAGGAGGCCTTCTACGAGAAGACGGGAGTACGTCGCGATGAACTAGCAGTAGTTGAACATGACGAATCAGGAGTACTCCCTCATGAAAACGATGAATTCGATGAGATTAGACAGCTGCTGCTAGAGTGAAAGTAGTGTACAACAGCATCCTCCTAAAAAAACAGATGAAATCATTCATTGGCTTACTGGAGTCTCTCAG TTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAACAAAAACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAAAAA] [+] EMBL BI806757 [ TCATTCATTGGCTTACTGGAGTCTCTCAGNTTTTTTTTTTCCTTTTGTCACTCATATGCTCTTTTTGAGTGTTTTACTGCCCTGCTGTACGTTGCAAAC TNACAACTTGTACATAGTAGTGATATGTTGGATGAATGTTACTATTACCATATTGCGTAGTTGTACATTGCAAGATTCATTTATAAGACATGGATTTCATAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||