These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2419 fasta sequence [GTGCGAGGCTAGGGTTAGGGTTCCCCTCGATCCGGCATTGCGGAGGCCCCCCACTCGGCGCGGCGGGCGCGGCGGGGGCTCGAGAGAGCGAGAGGGAGAGACGCGCGTGATTTGGATGGTGGATTGCGGCGCCGGGGCTCAGATCTGAGATGGCGGACGGCGGCGGCGGGGAGGAGGGGAGCGCGTCGGCGCTCAGGGGCTCCGCGCGACGGCGCGGGGCGGTGCAGCCGGCGGGGCTGGACGCCGACGAGCTCCTCACGCTGATGCACGGGTCGGATCCCGTCAAGGTCGAGCTCAACCGCCTGGAGAACGAAGTGAGGGATAAGGATAGGGAGCTCGGAGATGCGCATGCGGAGATTAAGGCGCTAAGGCTGTCAGAAAGAGCGCGGGAGAAGGCCGTCGAGGAGCTCACAGCGGAATATGAGAAGCTGGATGAGAAACTCAAGCTAACAGAGTCTCTCCTTGAAAGCAAAAATCTAGAACTCAAGAAAACAAATGATGAGAAAAAGGCGGCTATGGCTGCTCAGTTTGCAGCAGAAGCAACTCTGCGAAGAGTGCATGCAGCCCAAAAAGATGATGATATGCCACCTATTGAAGCTATTCTTGCTCCACTTGAAGCTGAACTAAAGCTTGCTCGTCAAGAGATTGCAAAACTCCAGGATGACAACAGAGCTTTAGATCGTCTAACAAAACAAAAGGAGGCAGCGCTGCTGGAAGCAGAAAGGACTGTAGAAATTGCATTAGCAAAAGCGGCCATGGTTGATGACATGCAAAACAAGAACCAAGAGTTAATGAAACAAATTGAGATCTGCCAGGAAGAAAATAAGATCTTGGACAGGCTGCACCGCCAAAAAGTTGCTGAAGTAGAAAAGCTTAGTCAAACTGTAAGAGAGCTGGAAGAGGCTGTTCTTGCTGGTGGTGCAGCTGCTAATGCTGTCAGAGATTACCAGCGGAAAGTTCAAGAAATGAATGAGGAAAGAAAAATTCTTGACCGTGAGCTTGCGCGGGCAAAAGTTACAGCAAACAGAGTTGCTGTTGTAGTTGCAAATGAGTGGAAAGATGCTAATGACAAAGTAATGCCTGTCAAACAGTGGCTTGAAGAGCGCAGGTTTCTGCAGGGTGAGATGCAGCAACTTCGTGATAAACTTGCTATTGCAGAACGAACAGCTCGATCTGAAGCTCAACTAAAGGAAAAGTACCAGCTGCGCCTAAAAGTTCTAGAAGATGGATTGAGGGGGCCACCTAGTGGTTCTAGTCGTCCTACAGAAGGAAAGAGTATCGGTAATGGACCATCCCGTCGGTTGTCTCTAGGTGGAGCAGATAATATGTCAAAAATCTCCCCGAATGGCATGTTGGCAAGGAGATCTCCATCATTTAATTCAAGATCCTCTCTTTCTACTAGCAGCAGCTTGGTCATCAAGCATGCAAAGGGAACTTCAAGGTCATTTGATGGTGGTACCAGGTCATTAGACCGTGGAAAAGTCCTTGGGAATGGACCTCATTTGCTCAATAGATCTACGGATGCTGTTAGAGATTGTGAGACAACTGATGATTGGAAGGCGGCTAACACAGAAGAAAAAGGTAGCGAGGCCACAAATAGTAGTTCAACTGACACAGTATCTGGTGTACTCTATGACATGCTGCAAAAGGAGGTCATTTCATTGAGAAAGGCATGCCATGAGAAAGATCAAAGTCTAAAAGACAAGGATGATGCAATTGAGATGTTGGCAAAAAAGGTAGATACATTAACCAAGGCTATGGAAGTGGAGGCTAAAAAGATGAGGCGAGAGGTAGCCGCTATGGAGAAGGAAGTTGCTGCTATGCGTCTTGACAAGGATCAAGAAAACAAGGCTAAGCGGCCTGGAAATTTCAAAGGACCTGGAACCACTTCTCAGGCGCCTCATGGA---AGAAATGCACCACGGGGTGGGTTGACTCGGAACCTTCAATAACATACCTCTAACACCAGTCAGCATGAATTTCTTCGATAGTTTCGGATTTCCCTTTGTATTTGTTCCTCTGTTCGTATTAATTTTGTGATTGAGATAGCACAGATGACCCTGCGACACCTAGATTGGGGAAAGAGTAGGCTTGCATCTGACATCGGCTTTGCTGTAATGTAGTGAAGGTAATCCTTCGGTAAGGTTTAACCTTGCGGCACGCTCCCATTTTGTCAAGGCAGTGCACGTTGTGGTTGTATAGGCTGGAGGACCTTGTCTTCTTCCCTTCTGTAATTTAGATAGTGTGTTTGCTTTTGCTTGTCAGGGTTGTGAATATATTATTATCGCAATATATTAGGGTCACCCTCTCCCGCTCTATTTGAGCTTGGTTGGGCTGTAATTGATTTCTCGTGTTTAACTGATGTAGCACAATTAACTCTTGATATTTTGTTTCAACCTCGAGCTGAATCAGAATGGTGGTT] [+] EMBL AK102381 [GTGCGAGGCTAGGGTTAGGGTTCCCCTCGATCCGGCATTGCGGAGGCCCCCCACTCGGCGCGGCGGGCGCGGCGGGGGCTCGAGAGAGCGAGAGGGAGAGACGCGCGTGATTTGGATGGTGGATTGCGGCGCCGGGGCTCAGATCTGAGATGGCGGACGGCGGCGGCGGGGAGGAGGGGAGCGCGTCGGCGCTCAGGGGCTCCGCGCGACGGCGCGGGGCGGTGCAGCCGGCGGGGCTGGACGCCGACGAGCTCCTCACGCTGATGCACGGGTCGGATCCCGTCAAGGTCGAGCTCAACCGCCTGGAGAACGAAGTGAGGGATAAGGATAGGGAGCTCGGAGATGCGCATGCGGAGATTAAGGCGCTAAGGCTGTCAGAAAGAGCGCGGGAGAAGGCCGTCGAGGAGCTCACAGCGGAATATGAGAAGCTGGATGAGAAACTCAAGCTAACAGAGTCTCTCCTTGAAAGCAAAAATCTAGAACTCAAGAAAACAAATGATGAGAAAAAGGCGGCTATGGCTGCTCAGTTTGCAGCAGAAGCAACTCTGCGAAGAGTGCATGCAGCCCAAAAAGATGATGATATGCCACCTATTGAAGCTATTCTTGCTCCACTTGAAGCTGAACTAAAGCTTGCTCGTCAAGAGATTGCAAAACTCCAGGATGACAACAGAGCTTTAGATCGTCTAACAAAACAAAAGGAGGCAGCGCTGCTGGAAGCAGAAAGGACTGTAGAAATTGCATTAGCAAAAGCGGCCATGGTTGATGACATGCAAAACAAGAACCAAGAGTTAATGAAACAAATTGAGATCTGCCAGGAAGAAAATAAGATCTTGGACAGGCTGCACCGCCAAAAAGTTGCTGAAGTAGAAAAGCTTAGTCAAACTGTAAGAGAGCTGGAAGAGGCTGTTCTTGCTGGTGGTGCAGCTGCTAATGCTGTCAGAGATTACCAGCGGAAAGTTCAAGAAATGAATGAGGAAAGAAAAATTCTTGACCGTGAGCTTGCGCGGGCAAAAGTTACAGCAAACAGAGTTGCTGTTGTAGTTGCAAATGAGTGGAAAGATGCTAATGACAAAGTAATGCCTGTCAAACAGTGGCTTGAAGAGCGCAGGTTTCTGCAGGGTGAGATGCAGCAACTTCGTGATAAACTTGCTATTGCAGAACGAACAGCTCGATCTGAAGCTCAACTAAAGGAAAAGTACCAGCTGCGCCTAAAAGTTCTAGAAGATGGATTGAGGGGGCCACCTAGTGGTTCTAGTCGTCCTACAGAAGGAAAGAGTATCGGTAATGGACCATCCCGTCGGTTGTCTCTAGGTGGAGCAGATAATATGTCAAAAATCTCCCCGAATGGCATGTTGGCAAGGAGATCTCCATCATTTAATTCAAGATCCTCTCTTTCTACTAGCAGCAGCTTGGTCATCAAGCATGCAAAGGGAACTTCAAGGTCATTTGATGGTGGTACCAGGTCATTAGACCGTGGAAAAGTCCTTGGGAATGGACCTCATTTGCTCAATAGATCTACGGATGCTGTTAGAGATTGTGAGACAACTGATGATTGGAAGGCGGCTAACACAGAAGAAAAAGGTAGCGAGGCCACAAATAGTAGTTCAACTGACACAGTATCTGGTGTACTCTATGACATGCTGCAAAAGGAGGTCATTTCATTGAGAAAGGCATGCCATGAGAAAGATCAAAGTCTAAAAGACAAGGATGATGCAATTGAGATGTTGGCAAAAAAGGTAGATACATTAACCAAGGCTATGGAAGTGGAGGCTAAAAAGATGAGGCGAGAGGTAGCCGCTATGGAGAAGGAAGTTGCTGCTATGCGTCTTGACAAGGATCAAGAAAACAAGGCTAAGCGGCCTGGAAATTTCAAAGGACCTGGAACCACTTCTCAGGCGCCTCATGGA AGAAATGCACCACGGGGTGGGTTGACTCGGAACCTTCAATAACATACCTCTAACACCAGTCAGCATGAATTTCTTCGATAGTTTCGGATTTCCCTTTGTATTTGTTCCTCTGTTCGTATTAATTTTGTGATTGAGATAGCACAGATGACCCTGCGACACCTAGATTGGGGAAAGAGTAGGCTTGCATCTGACATCGGCTTTGCTGTAATGTAGTGAAGGTAATCCTTCGGTAAGGTTTAACCTTGCGGCACGCTCCCATTTTGTCAAGGCAGTGCACGTTGTGGTTGTATAGGCTGGAGGACCTTGTCTTCTTCCCTTCTGTAATTTAGATAGTGTGTTTGCTTTTGCTTGTCAGGGTTGTGAATATATTATTATCGCAATATATTAGGGTCACCCTCTCCCGCTCTATTTGAGCTTGGTTGGGCTGTAATTGATTTCTCGTGTTTAACTGATGTAGCACAATTAACTCTTGATATTTTGTTTCAACCTCGAGCTGAATCAGAATGGTGGTT] [+] EMBL CB641317 [ GCTCAGGGGCTCCGCGCGACGGCGCGGGGCGGTGCAGCCGGCGGGGCTGGACGCCGACGAGCTCCTCACGCTGATGCACGGGTCGGATCCCGTCAAGGTCGAGCTCAACCGCCTGGAGAACGAAGTGAGGGATAAGGATAGGGAGCTCGGAGATGCGCATGCGGAGATTAAGGCGCTAAGGCTGTCAGAAAGAGCGCGGGAGAAGGCCGTCGAGGAGCTCACAGCGGAATATGAGAAGCTGGATGAGAAACTCAAGCTAACAGAGTCTCTCCTTGAAAGCAAAAATCTAGAACTCAAGAAAACAAATGATGAGAAAAAGGCGGCTATGGCTGCTCAGTTTGCAGCAGAAGCAACTCTGCGAAGAGTGCATGCAGCCCAAAAAGATGATGATATGCCACCTATTGAAGCTATTCTTGCTCCACTTGAAGCTGAACTAAAGCTTGCTCGTCAAGAGATTGCAAAACTCCAGGATGACAACAGAGCTTTAGATCGTCTAACAAAACAAAAGGAGGCAGCGCTGCTGGAAGCA ] [+] EMBL CA752614 [ CAAGAGACTGCAAAGCTCCAGGATGACAACAGAGCTTTAGATCGTCTAACAAAACAAAAGGAGGCAGCGCTGCTGGAAGCAGAAAGGACTGTAGAAATTGCATTAGCAAAAGCTGCCTTGGTTGATGACATGCAAAACAAGAACCAAGAGTTAATGAAGCAAATTGAGATCTGCCAGGAAGAAAACAAGATCTTGGACAGGCTGCACCGCCAAAAAGTTGCTGAAGTAGAAAAGCTTAGTCAAACTGTAAGAGAGCTGGAAGAGGCTGTTCTTGCTGGTGGTGCAGCTGCTAATGCTGTCAGAGATTACCAGCGGAAAGTTCAAGAAATGAATGAGGAAAGAAAAATTCTTGACCGTGAGCTTGCTCGGGCAAAAGTTACAGCAAACAGGGTTGCTGTTGTAGTTGCAAATGAGTGGAAAGATGCTAATGACAAAGTAATGCCTGTCAAACAGTGGCTT ] [+] EMBL CA767206 [ ATTAACCAAGGCTATGGAAGTGGAGGCTAAAAAGATGAGGCGAGAGGTAGCTGCTATGGAGAAGGAAGTTGCTGCTATGCGTCTTGACAAGGATCAAGAAAACAAGGCTAAGCGGCCTGGAAATTTCAAAGGACCTGGAACCACTTCTCAGGCGCCTCATGGAAGCAGAAATGCACCACGGGGTGGGTTGACTCGGAACCTTCAATAACATACCTCTAACACCAGTCAGCATGAATTTCTTCGATAGTTTCGGATTTCCCTTTGTATTTGTTCCTCTGTTCGTATCAATTTTGTGATTGAGATAGCACAGATGACCCTGCGACACCTAGATTGGGGAAAGAGTAGGCTTGCATCTGACATCGACTTTGCTGTAATGTAGTGAAGGTAATCCTTCGGTAAGGTTTAACCTTGCGGCACGCTCCCATTTTGTCAAGGCAGTGCACGTTGTGGTTGTATAGGCTGGAGGACCTTGTCTTCTTCCCTTCTGTAATTTAGATAGTGTGTTTGCTTTTGCTTGTCAGGGTTGTGAATATATTATTATCGCAATATATTAGGGTCACCCTCTCCCGCTCTATTTGAGCTTGGTTGGGCTGTAACTGATTTCTCGTGTTTAACTGATGTAGCACAATTAACTCTTGATATTTTGNTTCAA ] [+] EMBL AK063849 [ TGAATTTCTTCGATAGTTTCGGATTTCCCTTTGTATTTGTTCCTCTGTTCGTATTAATTTTGTGATTGAGATAGCACAGATGACCCTGCGACACCTAGATTGGGGAAAGAGTAGGCTTGCATCTGACATCGGCTTTGCTGTAATGTAGTGAAGGTAATCCTTCGGTAAGGTTTAACCTTGCGGCACGCTCCCATTTTGTCAAGGCAGTGCACGTTGTGGTTGTATAGGCTGGAGGACCTTGTCTTCTTCCCTTCTGTAATTTAGATAGTGTGTTTGCTTTTGCTTGTCAGGGTTGTGAATATATTATTATCGCAATATATTAGGGTCACCCTCTCCCGCTCTATTTGAGCTTGGTTGGGCTGTAATTGATTTCTCGTGTTTAACTGATGTAGCACAATTAACTCTTGATATTTTGTTTCAACCTCGAGCTGAATCAGAATGGTGGTT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||