These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7762#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2275 fasta sequence [AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG] [+] EMBL AK064159 [AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGAC ] [+] EMBL AK064765 [ GCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGAGTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGT ] [+] EMBL CB661347 [ CTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCC CAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCT ] [-] EMBL CB661348 [ CTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGT ] [+] EMBL CA764587 [ TCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTGCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGTTATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGA TTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||