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Oryza sativa
cluster # 7762 cluster # 7762       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7762#0 length = 2275 sequences # 5  

consensusID : consensus_7762#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2275
fasta sequence
                              [AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG]

[+] EMBL AK064159             [AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK064765             [              GCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGAGTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGT      ]
[+] EMBL CB661347             [                                                                                                                                                                                                                                                                                                                                                                                                                                      CTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCC CAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB661348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGT                                                                                                                 ]
[+] EMBL CA764587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTGCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGTTATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGA TTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG]


>consensus_7762#0 AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTC CCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCG GCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGT TCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCC CTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCA TCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCG CCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGT ACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGG ATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATG AAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGA GGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGG CAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGA AGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGC AGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACA CACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTA ATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGA ACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGC TTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTAC CACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGG GCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTG TTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTA GGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATG CATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAG CAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGC GTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATT GTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTG ATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTA AGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACC AATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCT GTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCT CATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCT TCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTT CTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAG ACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGG AAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGC ACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCG GTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCC TTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)