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Oryza sativa
cluster # 7771 cluster # 7771       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7771#0 length = 701 sequences # 5  

consensusID : consensus_7771#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 701
fasta sequence
                              [CCTCGTCGGCGGCCACAACA-CGTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTTCAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGGCGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGAGGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGGTGGTGGAGGCGAGGGGGAGGGGGTGGTCGGACCGGCGGTCCCAGCAGCAGCGCATGCCGCAGCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCAATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGCTCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACCTTGCCGCTGTCATCTACAAAGATGAGGATGACATAATAGACACAGCAAAAGAGCAGTACAGGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACCTGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAACTGTGGTTGACAAGGTGAAGGACTTCTTCAGCGACGTAACC]

[+] EMBL AK066974             [CCTCGTCGGCGGCCACAACA CGTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTTCAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGGCGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGAGGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGGTGGTGGAGGCGAGGGGGAGGGGGTGGTCGGACCGGCGGTCCCAGCAGCAGCGCATGCCGCAGCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCAATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGCTCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACCTTGCCGCTGTCATCTACAAAGATGAGGATGACATAATAGACACAGCAAAAGAGCAGTACAGGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACCTGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAACTG                                      ]
[+] EMBL CF324704             [     TCGGCGGCCACAACA CGTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTTCAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGGCGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGAGGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB670266             [          GGCCACAACATTTTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTTCAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGGCGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGAGGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGGTGGTGGAGGCGAGGGGGAGGGGGTGGTCGGACCGGCGGTCCCAGCAGCAGCGCATGCCGCAGCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCAATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGCTCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACCTTGCCGCTGTCATCTACAAAGATGAGGATGACATAATAGACACAGCAAAAGAGCAGTACAGGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACCTGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAACTGT                                     ]
[+] EMBL CB654224             [             CACAACA CGTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTTCAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGGCGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGAGGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGGTGGTGGAGGCGAGGGGGAGGGGGTGGTCGGACCGGCGGTCCCAGCAGCAGCGCATGCCGCATCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCAATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGCTCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACCTTGCCGCTGTCATCTACAAAGATGAGGATGACATAATAGACACAGCAAAAGAGCAGTACAGGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACCTGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAACTGTGGTTGACAAGGTGAAGGACTTCTTCAGCGACGTAACC]
[+] EMBL BF430680             [                                                                                                                                                                                                                                                                                                CAGCGCATGCCGCAGCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCAATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGCTCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACCTTGCCGCTGTCATCTACAAAGACGAGGATGACATAATAGACACAGCAAAAGAGCAGTACAGGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACCTGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAACTG                                      ]


>consensus_7771#0 CCTCGTCGGCGGCCACAACACGTACACCACACAGCGGCGCGAGACCGGAATAGGAGGTTT CAATGGAGGTGGTGGGCGGCGTGTCGTCGCTGAGCGCGTCTTCGCCGGCGCCGGCGCGGG CGCGGCTGCGGCAGCTGTCGCCCGGCGAGGCGAGCGGCGGGGGGAGCTTCCTGCTGATGA GGACGGCGCCGAGGAGCAGGCTGCAGGCGGCGGCGAGGCCGGCGAGGCGGGCGGCGCTGG TGGTGGAGGCGAGGGGGAGGGGGTGGTCGGACCGGCGGTCCCAGCAGCAGCGCATGCCGC AGCTGCCCAAGATCGAGGACGACGGCAACCCGCGCTTCGTCATCTTCATCCGCACCGCCA ATGTGTACTTCTGGTACCCGCTCAACATCGTCACCGGCGGCACGACGGCGAAGATCATGC TCGCGGCGAAGGACAACTTCCTCGGAAAGTACATCTACAAGGACACGCTCGCCAGGAACC TTGCCGCTGTCATCTACAAAGATGAGGATGACATAATAGACACAGCAAAAGAGCAGTACA GGGTGCTGAAGACCGACAATGAGTTTCGATATGGCTACAAAGTTGTGGAGAATGGGAACC TGAGGTCTGCGCTGACGACAAGTAATGTGATCGAACTCCCAAAGAAAGAAGAGCTCAAAA CTGTGGTTGACAAGGTGAAGGACTTCTTCAGCGACGTAACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)