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Oryza sativa
cluster # 7774 cluster # 7774       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7774#0 length = 3059 sequences # 4  
consensus_7774#1 length = 765 sequences # 1  

consensusID : consensus_7774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3059
fasta sequence
                              [GATTTATTTTATAATACTGAAGATGTGCGTTCCATTCTTGGTAGTGTGGCACCATATGCTGTACCTCAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTATTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACAATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGGGTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTATGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCAGCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAGTTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAG-AATTGGCAAGCAA-GGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATAC-AAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGAGATCTGCAACTTTGGCTAAGCCTTTACTCAATAGGAAGGGAGGTTGTGGGGATTTTGCCACTGCACCTTTACTTCAATAGGTACAATCTGACATACGCTATATCAGTTTTGTTTGGCTCCATATTTACCAACATAGGGTTTTCCATAGTAAGCTCATTCTATGCTTTCTGGATATACTACTTGTCGCGATGGTTCTCGGCCATGTCATAGGACATCACCTCGTCTAACTTGTAATTTTAGCTGTTGTAACTATTCATCCAACTTTGTGGCCTCGGTTTTCAGTTCGAGGTTCTTGATACATGAACGTGCCTGATCATAATGAAAAGTCCCATTGCAATTGTCCAAAAAAAAAAAA]

[+] EMBL AK064481             [GATTTATTTTATAATACTGAAGATGTGCGTTCCATTCTTGGTAGTGTGGCACCATATGCTGTACCTCAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCACATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCAAGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACGATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCTCGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGACCCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGTATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAGGCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTGTCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGGGCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCTCTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCATCCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGACTACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTGTATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTATTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACAATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGGGTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTATGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCAGCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAGTTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAG AATTGGCAAGCAA GGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGTCAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATAC AAAAATTGGTTCTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGAGATCTGCAACTTTGGCTAAGCCTTTACTCAATAGGAAGGGAGGTTGTGGGGATTTTGCCACTGCACCTTTACTTCAATAGGTACAATCTGACATACGCTATATCAGTTTTGTTTGGCTCCATATTTACCAACATAGGGTTTTCCATAGTAAGCTCATTCTATGCTTTCTGGATATACTACTTGTCGCGATGGTTCTCGGCCATGTCATAGGACATCACCTCGTCTAACTTGTAATTTTAGCTGTTGTAACTATTCATCCAACTTTGTGGCCTCGGTTTTCAGTTCGAGGTTCTTGATACATGAACGTGCCTGATCATAATGAAAAGTCCCA                        ]
[+] EMBL CF303689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACTAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAACTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAG AATTGGCAAGCAA GGGGAAGCTGCAGCCCACCAACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU062717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAAGGGGATTGGATTACAGAAGATGATTTTGGATCAGAAAATACAGTACTTNCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATATGGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTCAGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTCGGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCNGACAGAGACANATTATTGAGNANTTNGCAAGCAAGGGGGAANCTGCAGNCCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA763575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccccCAAATCGGGTTTCACAGAATATGTGGAGGTGAAGGCACCAACAAATTCATCCAAAAAATGGGTTCTCCATTACATTGAGGGAATGGCAGCTTGCATTAGAAAAAGGCAATGCCTTTACCATTGCTCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAAGAATCCATACAAACTTGGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCAATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCATTGAGATCTGCAACTTTGGCTAAGCCTTTACTCAATAGGAAGGGAGGTTGCGGGGATTTTGCCACTGCACC TTACTTCAATAGGTACAATCTGACATACGCTATATCAGTTTTGTTTGGCTCCATATTTACCAACATAGGGTTTTCCATAGTAAGCTCATTCTATGCTTTCTGGATATACTACTTGTCGCGATGGTTCTCGGCCATGTCATAGGACATCACCTCGTCTAACTTGTAATTTTAGCTGTTGTAACTATTCATCCAACTTTGTGGCCTCAGTTTTCAGTTCGAGGTTCTTGATACATGAACGTGCCTGATCATAATGAAAAGTCCCATTGCAATTGTCCAAAAAAAAAAAA]


>consensus_7774#0 GATTTATTTTATAATACTGAAGATGTGCGTTCCATTCTTGGTAGTGTGGCACCATATGCT GTACCTCAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCA CATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCA AGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACG ATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCT CGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGAC CCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGT ATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAG GCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTG TCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGG GCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCT CTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCAT CCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGAC TACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTG TATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATT TATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCT TGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAAC TTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTA TTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAAT TGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTA TTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACA ATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGG GTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTA TGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCA GCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGC TACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGG ATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGG CACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCC TGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTG CCAAAGAACTGAGTTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATG TGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAA CGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCA AGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAA CTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTT TGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATAT GGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTC AGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTC GGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGG CAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGT CAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAA ATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTT CTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGC TCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAA GAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCA ATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCA TTGAGATCTGCAACTTTGGCTAAGCCTTTACTCAATAGGAAGGGAGGTTGTGGGGATTTT GCCACTGCACCTTTACTTCAATAGGTACAATCTGACATACGCTATATCAGTTTTGTTTGG CTCCATATTTACCAACATAGGGTTTTCCATAGTAAGCTCATTCTATGCTTTCTGGATATA CTACTTGTCGCGATGGTTCTCGGCCATGTCATAGGACATCACCTCGTCTAACTTGTAATT TTAGCTGTTGTAACTATTCATCCAACTTTGTGGCCTCGGTTTTCAGTTCGAGGTTCTTGA TACATGAACGTGCCTGATCATAATGAAAAGTCCCATTGCAATTGTCCAAAAAAAAAAAA



consensusID : consensus_7774#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 765
fasta sequence
                              [AAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGT]

[+] EMBL CB667277             [AAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCTATTGCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGT]


>consensus_7774#1 AAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATTTATCG TGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCTTGGCT ATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAACTTTCA ACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTATTCCA CAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAATTGCCT ATTGCAGGGAAATAATCTATATGCTACGCAAGAAGCTGATTCACATTCACTGTTTCTGGA ACTGTCTAGACTTTTCTTTGATGGATCCCCTGATCTGCACTTTGCGAACTTTCTGCACAT GGTCAAAACCATGGCAGATTCTGGCACCACAGCTGAACAAATAGAGTCTTTTATCGTTAA TAATCAGAATGTGCCTGATTTGCCTGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGAT CATAGCAGACCAAGATGTTGATTGCCAAAGAACTGAATTCCAATCTATATGTGACAGTCA GAAAACTGAAATCCGATCTACATGTGAACTCAATATTTCCAAGCATCAGAGAACGTCTGG AGTTGCTTCAAGTTGGCCACCAAACGACTGGAAAACAGCCCCAGATTTCATAACATCTCA CAATAGCCAGTTTACACCCAATCAAGAGACAAACTTGAACAATGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7774#0      GATTTATTTTATAATACTGAAGATGTGCGTTCCATTCTTGGTAGTGTGGCACCATATGCT 60
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GTACCTCAGGTATGCAGCAGATCACTTGGGAAAGATATTGGATTCAAAATAAAGGTATCA 120
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CATAGTGATGCTTTGATGATCCTCAAATCCTGGATTGCTTCACAGACTTCTTTTAGTGCA 180
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      AGTATGGACCAGATGTGCAAATTCTACACCTTTGTGTCAGAAGGTTTTGCCACTGCAACG 240
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      ATTGACATTAAACGGGAGTTTTTGTCTTGCTCCTCTATATTTACACCATTAAACCGTGCT 300
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CGATCTAATGATTTTGTTCCTGGAAAATTCTTGTCCCCAAAAGATCTGTATTGGCATGAC 360
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CCAACAGGCTGTTCTGAAATAATAACAGAGAAAGTCATTTCAATGAAGAATAAGATTAGT 420
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      ATGTTCCCAAGAAAGATGCTATCTTCAGCCTATCCCAGCCTTTGCGAATTCTTTACTGAG 480
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GCATGTGGTGTACCAAAGGTTCCCAAGACATCTGACTATGTTGATATACTTTTAGGGCTG 540
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TCGAATGCTGCATTACCTTCAGAAGTAGCCAATCAGGTCTTTCATGTGTTTGCGAGGTGG 600
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GCTAATGATCTCCATTCTGCAAATGACAATATGAATGATATATTGTTCTTGGAAGGATCT 660
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CTTCAAAAGTTGGAGACAACAATACTGCCAACCTTGGGTGATAAATGGGTCTCTCTCCAT 720
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CCTTCTTTTGGCCTTGTTTGCTGGGTAGATGATAATGAGTTGATGCAACACTTTGAGGAC 780
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TACAATGGTGTTAACTTCATACAATTTGGAGAACTTTCTTATGAAGACAAGCAACTGCTG 840
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TATGGAAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATT 900
consensus_7774#1      -----AAGAATTGCTGCATTGCTAAAAAGCCTAGGCATCCCTGCACTTTCTAAGGTTATT 55
                           *******************************************************

consensus_7774#0      TATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCT 960
consensus_7774#1      TATCGTGAAGCAATATTTTACGGTACAGTGGATAACAGAGAAAAGGTTACAGTAATTTCT 115
                      ************************************************************

consensus_7774#0      TGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAAC 1020
consensus_7774#1      TGGCTATTACCATATATGCAACGCTACATCTATAAGATGCATAGAGATACATATGTAAAC 175
                      ************************************************************

consensus_7774#0      TTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTA 1080
consensus_7774#1      TTTCAACAAAATGAAATCACGAAGCTTAGCAATCTCCAAGTTATTGTTGTTGAGAAGTTA 235
                      ************************************************************

consensus_7774#0      TTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAAT 1140
consensus_7774#1      TTCCACAAGTATAAGCTGAAAGAACGTGAGAGTTCTTGTAAGAGAAGATTCAAATGCAAT 295
                      ************************************************************

consensus_7774#0      TGCCTATTGCAGGTTAGTATCTACCTTTCTATTAACTACCTGCTCTTCATTTGTTTCTTA 1200
consensus_7774#1      TGCCTATTGCAGG----------------------------------------------- 308
                      *************                                               

consensus_7774#0      TTCTTATAAGAAAGAGAACTTCTGGAGAAGCCCTTTTTGCTAGAATTCCACCCACAAACA 1260
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      ATTGTATTTCAAGTTCTGATTATTTTGATTTATTTTTTTCCACATGTGGAGGCCTGTAGG 1320
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GTAGCATTATTTATCGACCTCCTTACCTTCTAAGCTTCATGCCTTTTGAACTTTATGCTA 1380
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TGCAAATGCATGCATAATGTACTCATTACTCAACAGTAAAATTTTACTCTGATAAAGTCA 1440
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GCTCTGATTTCCCAAATCCATTTGTTATGTTCCTTATTTCCAGGGAAATAATCTATATGC 1500
consensus_7774#1      --------------------------------------------GAAATAATCTATATGC 324
                                                                  ****************

consensus_7774#0      TACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGG 1560
consensus_7774#1      TACGCAAGAAGCTGATTCACATTCACTGTTTCTGGAACTGTCTAGACTTTTCTTTGATGG 384
                      ************************************************************

consensus_7774#0      ATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGG 1620
consensus_7774#1      ATCCCCTGATCTGCACTTTGCGAACTTTCTGCACATGGTCAAAACCATGGCAGATTCTGG 444
                      ************************************************************

consensus_7774#0      CACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCC 1680
consensus_7774#1      CACCACAGCTGAACAAATAGAGTCTTTTATCGTTAATAATCAGAATGTGCCTGATTTGCC 504
                      ************************************************************

consensus_7774#0      TGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTG 1740
consensus_7774#1      TGAGCATGAAGCTGTTTGGTCCTTTTCTTCCTTGATCATAGCAGACCAAGATGTTGATTG 564
                      ************************************************************

consensus_7774#0      CCAAAGAACTGAGTTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATG 1800
consensus_7774#1      CCAAAGAACTGAATTCCAATCTATATGTGACAGTCAGAAAACTGAAATCCGATCTACATG 624
                      ************ ***********************************************

consensus_7774#0      TGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAA 1860
consensus_7774#1      TGAACTCAATATTTCCAAGCATCAGAGAACGTCTGGAGTTGCTTCAAGTTGGCCACCAAA 684
                      ************************************************************

consensus_7774#0      CGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCA 1920
consensus_7774#1      CGACTGGAAAACAGCCCCAGATTTCATAACATCTCACAATAGCCAGTTTACACCCAATCA 744
                      ************************************************************

consensus_7774#0      AGAGACAAACTTGAACAATGTTGTACCTTCGTTAGACTTAACCAAGACTCAGTGTGAAAA 1980
consensus_7774#1      AGAGACAAACTTGAACAATGT--------------------------------------- 765
                      *********************                                       

consensus_7774#0      CTCAGAAGATATTGTGGGTCCTGTTGATCTTGAAGGGGATTGGATTACAGAAGATGATTT 2040
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TGGATCAGAAAATACAGTACTTGCAGAACGTATAGGGGCAACTGGCGATGAGCCTCATAT 2100
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GGTGATGTCGATTAACTCTGCCAATTTGCCGGCTTATTTGGATTTAGAAACCGGAAGCTC 2160
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      AGCAAACTCAGTGGTGGATATTGAGCTAACAGAATTCAATGATAAACTGGCAAATGTTTC 2220
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GGAGAAGAGGGATAGGCTCTGCATAAAGGCTCCAGACAGAGACAAATTATTGAGAATTGG 2280
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CAAGCAAGGGGAAGCTGCAGCCCACCAACATTTTGTTGATCATTTTGGATCCAATAATGT 2340
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CAGGTGGGTGAATCAAGAAAATGAAACGGGGTTGCCTTATGACATTGTTGTCACACACAA 2400
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      ATCGGGTTTCACAGAATATGTGGAGGTGAAGGCAACAACAAATTCATACAAAAATTGGTT 2460
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CTACATTACATTGAGGGAATGGCAGTTTGCATTAGAAAAAGGCAATGCCTTTACCATTGC 2520
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TCGTGTTGTTCTGAAGGATTCAAAGAAAGCAAATGACAAATCAAATGTTCTCATTTTGAA 2580
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GAATCCATACAAACTTTGCCTGAACAAATCAGTGTATCTTGCCCTCATAATACCACAGCA 2640
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      ATATCAAACAAAACGCCGTTACTTTGAAGGTAACTCGGATTTGCAAAGTGAGGTAAACCA 2700
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TTGAGATCTGCAACTTTGGCTAAGCCTTTACTCAATAGGAAGGGAGGTTGTGGGGATTTT 2760
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      GCCACTGCACCTTTACTTCAATAGGTACAATCTGACATACGCTATATCAGTTTTGTTTGG 2820
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CTCCATATTTACCAACATAGGGTTTTCCATAGTAAGCTCATTCTATGCTTTCTGGATATA 2880
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      CTACTTGTCGCGATGGTTCTCGGCCATGTCATAGGACATCACCTCGTCTAACTTGTAATT 2940
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TTAGCTGTTGTAACTATTCATCCAACTTTGTGGCCTCGGTTTTCAGTTCGAGGTTCTTGA 3000
consensus_7774#1      ------------------------------------------------------------
                                                                                  

consensus_7774#0      TACATGAACGTGCCTGATCATAATGAAAAGTCCCATTGCAATTGTCCAAAAAAAAAAAA 3059
consensus_7774#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)