These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3665 fasta sequence [CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTTTTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGATTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGTTGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGTTCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTGCATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTAGGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAACTCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTTAATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGAACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATTTAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCAATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACCAAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCCTGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCCGACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCATTTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCCACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAAATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTATTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTGTTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGATTTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATATAATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTGCATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTTAGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCACCTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTAACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGGGTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAACTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCTGTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATCATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGCGGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTATATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAGATAAAAAAA] [+] EMBL AK066007 [CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTTTTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGATTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGTTGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGTTCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTGCATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTAGGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAACTCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTTAATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGAACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATTTAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCAATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACCAAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCCTGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCCGACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCATTTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCCACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAAATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTATTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTGTTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGATTTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATATAATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTGCATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTTAGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCACCTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTAACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGGGTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAACTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCTGTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATCATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGCGGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTATATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAGAT ] [+] EMBL CB666816 [ GGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTANCATCACAGAATTATTACCATATGGATG ] [-] EMBL CA759999 [ AGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGGCTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACGATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCACATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAGGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAG TGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCCATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAAAAAAAAAAA] consensusID : consensus_7789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 872 fasta sequence [TCTGGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTGTACTTGTCATTGTACTTTCCATGAAGCATCCCATTGCCATTGTTGACCCTTTCAATAAAACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAGATTAAATCTGTC] [-] EMBL CB666817 [TCTGGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTGTACTTGTCATTGTACTTTCCATGAAGCATCCCATTGCCATTGTTGACCCTTTCAATAAAACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAGATTAAATCTGTC] consensusID : consensus_7789#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 500 fasta sequence [TCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGAGGTGCTGACAGGTAGGAATGGGTGGGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTTGTGGGTGCCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATA] [+] EMBL CF324436 [TCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGAGGTGCTGACAGGTAGGAATGGGTGGGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTTGTGGGTGCCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7789#0 CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGC 60 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGC 120 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCT 180 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 CGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACC 240 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGC 300 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAG 360 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCA 420 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGC 480 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTAT 540 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTT 600 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTT 660 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTA 720 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTG 780 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTT 840 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGA 900 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGT 960 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGT 1020 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTG 1080 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 CATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTA 1140 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAAC 1200 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTT 1260 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGA 1320 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATT 1380 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCA 1440 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACC 1500 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGC 1560 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGA 1620 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCC 1680 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCC 1740 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCC 1800 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCAT 1860 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCC 1920 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAA 1980 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTA 2040 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTG 2100 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGAT 2160 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATAT 2220 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTG 2280 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 CATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTT 2340 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 AGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCAC 2400 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 CTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTA 2460 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGG 2520 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAA 2580 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 CTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCT 2640 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATC 2700 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGC 2760 consensus_7789#1 ------------------------------------------------------------ consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTA 2820 consensus_7789#1 -------------TCTGGGTTTGGCCTC-GTCTTTGTGCCAGTGG--GCATCTCAGGTTG 44 consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTC 2880 consensus_7789#1 TA-CTTGTC-------ATTGTACTTTCCAT-GAAGCATCC-CATTGCCATTGTTGACC-- 92 consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGA 2940 consensus_7789#1 --CTTT----CAATAA--AACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGA 144 consensus_7789#2 -------------------------------------------------TCATCTCCAAG 11 ** * consensus_7789#0 GATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGA 3000 consensus_7789#1 GATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGA 204 consensus_7789#2 CGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCG--AAGTAGCAA 69 **** ** * * * *** * * ****** * * * * consensus_7789#0 AGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATT 3060 consensus_7789#1 AGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATT 264 consensus_7789#2 AGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATA 129 ** * * **** * ** * * * ** ** * ** consensus_7789#0 AATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAG 3120 consensus_7789#1 AATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAG 324 consensus_7789#2 ATTGGA--GTATCACCAGATCACTTACTGC----ATCAGGACTTCCC-----GCTGCTAT 178 * ** * * * ** *** ** *** ** * * ** ** consensus_7789#0 AAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGA 3180 consensus_7789#1 AAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGA 384 consensus_7789#2 ATATG-CATTGCAGAA----TAGCTTAC--TGCAGATATCATACAAGAATTTGGATTCAT 231 * * * *** * **** * ** * * *** * ***** *** consensus_7789#0 CGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGT--CATGACAAGCATA 3238 consensus_7789#1 CGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGT--CATGACAAGCATA 442 consensus_7789#2 TGA----CCTTC-TCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTA 286 * *** * *** ** * ** ** ** * * *** * ** consensus_7789#0 TTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCA 3298 consensus_7789#1 TTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCA 502 consensus_7789#2 TCTTATTTTGGGAGGTGCTGACAGGTAG---GAATGGGTGGGGGGTTGTG-GCTTGATTG 342 * * ** ** ** * * ** * *** * * * * ***** * consensus_7789#0 GAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTT 3358 consensus_7789#1 GAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTT 562 consensus_7789#2 G--GCAGTGGCAACAATTAAACACAAGGGTGATG---ATG-GTTGTGGGTGCCTTTTGAG 396 * * ** ** *** * ** ** * ** ** ** *** * consensus_7789#0 GATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCT 3418 consensus_7789#1 GATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCT 622 consensus_7789#2 AATCCGGAAAACGGCAGAAGAA-----AGGAAGATGATTGTGGATCTGAGCAGTAGCTCA 451 **** ** * ** * * * * ** *** *** *** consensus_7789#0 TCA--TGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCA 3476 consensus_7789#1 TCA--TGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCA 680 consensus_7789#2 AGAATTGCAGCCATGCCTTATCCATGTGTTGACC-----AGCAGGACGTCCATA------ 500 * ** *** *** * ** *** * *** * * * * ** * consensus_7789#0 CAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATT 3536 consensus_7789#1 CAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATT 740 consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 GACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATA 3596 consensus_7789#1 GACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATA 800 consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 TCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAG 3656 consensus_7789#1 TCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAG 860 consensus_7789#2 ------------------------------------------------------------ consensus_7789#0 ATAAAAAAA--- 3665 consensus_7789#1 ATTAAATCTGTC 872 consensus_7789#2 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||