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Oryza sativa
cluster # 7791 cluster # 7791       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7791#0 length = 2604 sequences # 4  
consensus_7791#1 length = 832 sequences # 1  

consensusID : consensus_7791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2604
fasta sequence
                              [TCCGGCGAGCGTCGACGACGACGAATCGTCGCGAGAAATTCGGAAGTCGATAGGGGAGGTCGGGGAGGAGGGGGGAGATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGCAGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCGGAGGACATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGTAAATTGATCAATTTAGCTGTACCTGGGACCATTGATGAGAGAGCAATAAATAAGAAAAGAGTTCTTAACCCATGGGAGAGGAATGAAAATCACACCCTGTGCCTCAACTCTGCCAAGGCCATTGGATGTACAGTTGTAAACATTGGTACACAAGATTTGGTGGAGGGAAGGCCTCATTTAATTCTTGGATTGATATCTCAAATCATAAAGATTCAACTTTTGGCTGATCTAAATCTCAAGAAGACACCCCAGCTGGTGGAATTGTTTGATGACAGCAAGGATATAGATGAAGTGTTGAGCTTGTCACCAGAAAAGATGCTACTTCGGTGGATGAACCATCATCTGAAAAAAGCTGGCTACAAGAAAACCGTCAGCAATTTCTCTACAGATGTGAAGGATGGTGAAGCATATGCTTACCTTCTAAAAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTACCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTGTTACACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCAAACAGCAAAGTGAAAGCATCAGGAAGAACATCTCAAATGGAAAGCTTCAAGGACAAGAGCTTATCAAATGGACGGTTTTTCCTTGAACTTCTTAGTGCAGTACAACCGAGGGTTGTCAACTGGAAAGTTGTTACAAAGGGGGAAGATGATGAGGAAAAGAAGCTAAATGCTACATATACCATTAGTGTTGCAAGGAAAATCGGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCCCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGATGATGATTACACGGGCTGTTCTTCTGTCCTGATAGCGGTTTTATTATGGTGGAACTAGTACCGTCATGGTGTCCAACGTTTGCTGCCAGAAGTGATTTTTTTCCTGCTTCTGTTCCAAGCCTACTTTTGAGGTAGCATGATAGATACAGATACAGATAGATAGAGTTGCCGTTTGTTCATTTAATTTTGCTCTATACATACGACAGGGAAAAAACTATACATAGGTCACTAGTTGGGCATTTCTTGTACTCTTAGTATACTTTGATTTCAATGTCTTCACTTTGTTTCCCGGACCTGTCAAAATGTACTGGCATCGTTTGTAATCTGCTGCTGCTCTGGACCATTCATGAGCTGTATATAACATAATATTGTGGAGAGATCTGGTTTCCCAAGAAAAAAAAAAAAA]

[+] EMBL AK069715             [TCCGGCGAGCGTCGACGACGACGAATCGTCGCGAGAAATTCGGAAGTCGATAGGGGAGGTCGGGGAGGAGGGGGGAGATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGCAGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCGGAGGACATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGTAAATTGATCAATTTAGCTGTACCTGGGACCATTGATGAGAGAGCAATAAATAAGAAAAGAGTTCTTAACCCATGGGAGAGGAATGAAAATCACACCCTGTGCCTCAACTCTGCCAAGGCCATTGGATGTACAGTTGTAAACATTGGTACACAAGATTTGGTGGAGGGAAGGCCTCATTTAATTCTTGGATTGATATCTCAAATCATAAAGATTCAACTTTTGGCTGATCTAAATCTCAAGAAGACACCCCAGCTGGTGGAATTGTTTGATGACAGCAAGGATATAGATGAAGTGTTGAGCTTGTCACCAGAAAAGATGCTACTTCGGTGGATGAACCATCATCTGAAAAAAGCTGGCTACAAGAAAACCGTCAGCAATTTCTCTACAGATGTGAAGGATGGTGAAGCATATGCTTACCTTCTAAAAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTACCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTGTTACACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCAAACAGCAAAGTGAAAGCATCAGGAAGAACATCTCAAATGGAAAGCTTCAAGGACAAGAGCTTATCAAATGGACGGTTTTTCCTTGAACTTCTTAGTGCAGTACAACCGAGGGTTGTCAACTGGAAAGTTGTTACAAAGGGGGAAGATGATGAGGAAAAGAAGCTAAATGCTACATATACCATTAGTGTTGCAAGGAAAATCGGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCCCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGATGATGATTACACGGGCTGTTCTTCTGTCCTGATAGCGGTTTTATTATGGTGGAACTAGTACCGTCATGGTGTCCAACGTTTGCTGCCAGAAGTGATTTTTTTCCTGCTTCTGTTCCAAGCCTACTTTTGAGGTAGCATGATAGATACAGATACAGATAGATAGAGTTGCCGTTTGTTCATTTAATTTTGCTCTATACATACGACAGGGAAAAAACTATACATAGGTCACTAGTTGGGCATTTCTTGTACTCTTAGTATACTTTGATTTCAATGTCTTCACTTTGTTTCCCGGACCTGTCAAAATGTACTGGCATCGTTTGTAATCTGCTGCTGCTCTGGACCATTCATGAGCTGTATATAACATAATATTGTGGAGAGAT                          ]
[+] EMBL CB645883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCTCTAAAAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTACCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTGTTGCACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCAAACAGCAAAGTGATAGCATCATGAAGAACATCTCAAATGGATAGCTTCAAGGACAAGAGCTTATCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB645884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCCCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGATGATGATTACACGGGCTGTTCTTCTGTCCTGATAGCGGTTTTATTATGGTGGAACTAGTACCGTCATGGTGTCCAACGTTTGCTGCCAGAAGTGATTTTTTTCCTGCTTCTGTTCCAAGCCTACTTTTGAGGTAGCATGATAGATACAGATACAGATAGATAGAGTTGCCGTTTGTTCATTTAATTTTGCTCTATACATACGACAGGGAAAAAACTATACA                                                                                                                                                                                         ]
[-] EMBL CA759966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCATTGAGGTAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATTTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATGCCTCGCCAGCAGAAAATGGAAATGGTGTGGTAGGATGATGATGATTACACGGGCTGTTTTTCTGTCCTGATAGCGGTTTTATTATGGTGGAACTAGTACCGTCATGGTGTCCAACGTTTGCTGCCAGAAGTGAATTTTTTCCTGCTTCTGTTCCAAGCCTACTTTTGAGGTAGCCTGATAGATACAGATCCAGATAGATAGAGTTGCCGTTTGTTCATTTAATTTTGCTCTATACATACGACAGGGAAAAAACTATACATAGGTCCCTGGTTGGGCATTTCTTGTACTCTTAGTATACTTTGATTTCAAAGTCTTCACTTTGTTTCCCGGACCTGTCAAAATGTACTGGCATCGTTTGTAATCTGCTGCTGCTCTGGACCATTCATGAGCTGTATATAACATAATATTGTGGAGAGATCTGGTTTCCCAAGAAAAAAAAAAAAA]


>consensus_7791#0 TCCGGCGAGCGTCGACGACGACGAATCGTCGCGAGAAATTCGGAAGTCGATAGGGGAGGT CGGGGAGGAGGGGGGAGATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGC AGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGA GAGACTCCGGAGGACATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGG GGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTG ACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAA GGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTT TCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTT ATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAA TCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGTAAAT TGATCAATTTAGCTGTACCTGGGACCATTGATGAGAGAGCAATAAATAAGAAAAGAGTTC TTAACCCATGGGAGAGGAATGAAAATCACACCCTGTGCCTCAACTCTGCCAAGGCCATTG GATGTACAGTTGTAAACATTGGTACACAAGATTTGGTGGAGGGAAGGCCTCATTTAATTC TTGGATTGATATCTCAAATCATAAAGATTCAACTTTTGGCTGATCTAAATCTCAAGAAGA CACCCCAGCTGGTGGAATTGTTTGATGACAGCAAGGATATAGATGAAGTGTTGAGCTTGT CACCAGAAAAGATGCTACTTCGGTGGATGAACCATCATCTGAAAAAAGCTGGCTACAAGA AAACCGTCAGCAATTTCTCTACAGATGTGAAGGATGGTGAAGCATATGCTTACCTTCTAA AAGCTCTTGCTCCAGAGCATTCCCCTGAAACCACATTAGAGACAAAGGATCCTAGTGAGA GGGCTAAATTGGTACTTGAACAAGCAGAGAAGTTGGATTGCAAAAGATACTTGACTCCTA AGGATATCACTGAGGGTTCTGCCAATTTGAATCTTGCATTTGTGGCACAAATATTCCAGC ATCGGAATGGTCTAACTAGTGACACCAGACAAGTTACTCTCAATCAGACTGCATCACGTG ATGATGTTCTATTATCGAGAGAAGAAAGGTCCTTTCGGATGTGGATCAACAGTCTTGGGG TTGACTCTTACGTGAACAATGTTTTTGAAGATGTTCGCCATGGATGGGTACTTCTTGAAG TACTGGACAAAGTTTCTCCAGGATCTGTCAATTGGAAGCTGGCCTCGAAACCTCCAATTA AACTACCATTCAGGAAATTGGAGAATTGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAA AGTTTTCCTTAGTAAATTTAGCTGGGAATGATATTGTTCAGGGTAACAAGAAATTGATTG TTACACTTCTGTGGCAATTGATGAGATTTAATATGCTTCAATTGTTGAATAGACTGAGAT CCCACTCCCAAGGATCCCAAGGAAAAGAAATTACTGATGCTGATATACTAAAATGGGCAA ACAGCAAAGTGAAAGCATCAGGAAGAACATCTCAAATGGAAAGCTTCAAGGACAAGAGCT TATCAAATGGACGGTTTTTCCTTGAACTTCTTAGTGCAGTACAACCGAGGGTTGTCAACT GGAAAGTTGTTACAAAGGGGGAAGATGATGAGGAAAAGAAGCTAAATGCTACATATACCA TTAGTGTTGCAAGGAAAATCGGATGTTCCGTGTTTCTGCTGCCAGAGGACATCATTGAGG TAAATCAGAAGATGATCCTAACGCTTACGGCTAGCATCATGTATTGGAGTCTACAGAAGC AACCACAGTCACAATCTGAAACGTCAGAACAATCAGAGCCATCTAGTATGGCTTCGGATG CAGCTTCTGATATTGCTTCGGAGGACGCTGCTTCAATAACAGCTGCATCTGAGGGAGAAG AGGTGAATTCGCTATCTGATAGTATGTCCAATTTGACCACATATGATGCTATTTCAAATG CCCCGCCAGCAGAAAATGGAAATGGTGTGGCAGGATGATGATGATTACACGGGCTGTTCT TCTGTCCTGATAGCGGTTTTATTATGGTGGAACTAGTACCGTCATGGTGTCCAACGTTTG CTGCCAGAAGTGATTTTTTTCCTGCTTCTGTTCCAAGCCTACTTTTGAGGTAGCATGATA GATACAGATACAGATAGATAGAGTTGCCGTTTGTTCATTTAATTTTGCTCTATACATACG ACAGGGAAAAAACTATACATAGGTCACTAGTTGGGCATTTCTTGTACTCTTAGTATACTT TGATTTCAATGTCTTCACTTTGTTTCCCGGACCTGTCAAAATGTACTGGCATCGTTTGTA ATCTGCTGCTGCTCTGGACCATTCATGAGCTGTATATAACATAATATTGTGGAGAGATCT GGTTTCCCAAGAAAAAAAAAAAAA



consensusID : consensus_7791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [TTCCGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCGGAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTCCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATGTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGGTGAGAGATGGTCTTAACAGCTAACCAAAGGTAAATTGATCAATTTAGCCGTACCTGGGACCATTGATGAGAGAACAATAAATTATAAAAGAGTTCTTAACCCCTTGGAGAGGAATGACCCCTACACCCTGTGCCCTCAACTCTGCCAAGCAATTGGATGTACAGTGGTAACCTGGGTACACAGAATTGGTGGAGGGAAGCCCAATTAATCCTGAATAATATCCAAATATAAAATACACTTGCCAACTAAATCCAAAAACCCACGTTTAATTTTATACCACGATTAATAACTATCTTACACACGAACACATTATAATTCTAAACANCACAAAACCAAATCATNAGTGAGTACTTAATACGTAACAT]

[+] EMBL CA753335             [TTCCGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCGGAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACCAGGAGATTGAGTCCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATGTACCAATCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGGTGAGAGATGGTCTTAACAGCTAACCAAAGGTAAATTGATCAATTTAGCCGTACCTGGGACCATTGATGAGAGAACAATAAATTATAAAAGAGTTCTTAACCCCTTGGAGAGGAATGACCCCTACACCCTGTGCCCTCAACTCTGCCAAGCAATTGGATGTACAGTGGTAACCTGGGTACACAGAATTGGTGGAGGGAAGCCCAATTAATCCTGAATAATATCCAAATATAAAATACACTTGCCAACTAAATCCAAAAACCCACGTTTAATTTTATACCACGATTAATAACTATCTTACACACGAACACATTATAATTCTAAACANCACAAAACCAAATCATNAGTGAGTACTTAATACGTAACAT]


>consensus_7791#1 TTCCGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGAGAGACTCCG GAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGGGGCTCAATG AGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTGACGCCGACC AGGAGATTGAGTCCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAAGGGTGAGCG CCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTTTCCTCAAGT CCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTTATGTGGCGC ACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATGTACCAATCGAGCCTA CCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGGTGAGAGATGGTCT TAACAGCTAACCAAAGGTAAATTGATCAATTTAGCCGTACCTGGGACCATTGATGAGAGA ACAATAAATTATAAAAGAGTTCTTAACCCCTTGGAGAGGAATGACCCCTACACCCTGTGC CCTCAACTCTGCCAAGCAATTGGATGTACAGTGGTAACCTGGGTACACAGAATTGGTGGA GGGAAGCCCAATTAATCCTGAATAATATCCAAATATAAAATACACTTGCCAACTAAATCC AAAAACCCACGTTTAATTTTATACCACGATTAATAACTATCTTACACACGAACACATTAT AATTCTAAACANCACAAAACCAAATCATNAGTGAGTACTTAATACGTAACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7791#0      TCCGGCGAGCGTCGACGACGACGAATCGTCGCGAGAAATTCGGAAGTCGATAGGGGAGGT 60
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      CGGGGAGGAGGGGGGAGATGTCGGGGTTCGTCGGCGTCGTGGTCTCCGACCCGTCGCTGC 120
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      AGGGCCAGTTCACGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGA 180
consensus_7791#1      ---------TTCCGCAGGTGGAGCTCCGATCGCTCAAGGCCAAGTTTCTATCTCTGAAGA 51
                               *  ************************************************

consensus_7791#0      GAGACTCCGGAGGACATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGG 240
consensus_7791#1      GAGACTCCGGAGGGCATGCCACGACGAAGAACCTCCCGGGACTGATGAAGAAGCTGAGGG 111
                      ************* **********************************************

consensus_7791#0      GGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTG 300
consensus_7791#1      GGCTCAATGAGGTGATCTCCGAGGAGGAGATCGCCGCCCACTTGTCCCAGTCTTACCCTG 171
                      ************************************************************

consensus_7791#0      ACGCCGACCAGGAGATTGAGTTCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAA 360
consensus_7791#1      ACGCCGACCAGGAGATTGAGTCCGAGTCATTCCTACGGGAATACCTGAATCTGCAGTCAA 231
                      ********************* **************************************

consensus_7791#0      GGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTT 420
consensus_7791#1      GGGTGAGCGCCAAAGAAGGCGGAGGTGGTGGTGGCGGCGGTGGCAAGACCGCGTCATCTT 291
                      ************************************************************

consensus_7791#0      TCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTT 480
consensus_7791#1      TCCTCAAGTCCAGTACCACTACATTGCTGCACAATCTCAACCAGGCGGAGAAGTCGTCTT 351
                      ************************************************************

consensus_7791#0      ATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATTTACCAA 540
consensus_7791#1      ATGTGGCGCACATCAACACCTACCTTCGTGAAGACCCGTTTCTGAAGAAGTATGTACCAA 411
                      ***************************************************** ******

consensus_7791#0      TCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATG----- 595
consensus_7791#1      TCGAGCCTACCGACAACCAGCTGTTCGATCTTGTCAGGGACGGTGTTCTGCTATGGTGAG 471
                      *******************************************************     

consensus_7791#0      --------------------------TAAATTGATCAATTTAGCTGTACCTGGGACCATT 629
consensus_7791#1      AGATGGTCTTAACAGCTAACCAAAGGTAAATTGATCAATTTAGCCGTACCTGGGACCATT 531
                                                ****************** ***************

consensus_7791#0      GATGAGAGAGCAATAAATAAGAAAAGAGTTCTTAACCCATGGGAGAGGAATGAAAATCAC 689
consensus_7791#1      GATGAGAGAACAATAAATTATAAAAGAGTTCTTAACCCCTTGGAGAGGAATGACCCCTAC 591
                      ********* ******** * ***************** * ************     **

consensus_7791#0      ACCCTGTGCC-TCAACTCTGCCAAGGCCATTGGATGTACAGTTGTAAACATTGGTACACA 748
consensus_7791#1      ACCCTGTGCCCTCAACTCTGCCAAG-CAATTGGATGTACAGTGGTAACC-TGGGTACACA 649
                      ********** ************** * ************** **** * * ********

consensus_7791#0      AGATTTGGTGGAGGGAAGGCCTCATTTAATTCTTGGATTGATATCTCAAATCATAAAGAT 808
consensus_7791#1      GAATT-GGTGGAGGGAAG--CCCAATTAATCCT--GAATAATATC-CAAAT-ATAAAAT- 701
                        *** ************  * ** ***** **  ** * ***** ***** *****   

consensus_7791#0      TCAACTTTTGGCTGATCTAAATCTCAAGAAGACACCCCAGCTGGTGGAAT-TGTTTGATG 867
consensus_7791#1      ---ACACTTGCC--AACTAAATC-CAAAAACCCACGTTTAATTTTATACCACGATTAATA 755
                         **  *** *  * ******* *** **  ***      *  *  *    * ** ** 

consensus_7791#0      AC-AGCAAGGATATAGATGAAGTGTTGAGCTTGTCACCAGAAAAGATGCTACTTCGGTGG 926
consensus_7791#1      ACTATCTTACACACGAACACATTATAATTCTAAACANCACAAAACCAAAT-CATNAGTGA 814
                      ** * *    * *   *   * * *    **   ** ** ****     * * *  *** 

consensus_7791#0      ATGAACCATCATCTGAAAAAAGCTGGCTACAAGAAAACCGTCAGCAATTTCTCTACAGAT 986
consensus_7791#1      GT-ACTTAATACGTAACAT----------------------------------------- 832
                       * *   *  *  * * *                                          

consensus_7791#0      GTGAAGGATGGTGAAGCATATGCTTACCTTCTAAAAGCTCTTGCTCCAGAGCATTCCCCT 1046
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAAACCACATTAGAGACAAAGGATCCTAGTGAGAGGGCTAAATTGGTACTTGAACAAGCA 1106
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAGAAGTTGGATTGCAAAAGATACTTGACTCCTAAGGATATCACTGAGGGTTCTGCCAAT 1166
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TTGAATCTTGCATTTGTGGCACAAATATTCCAGCATCGGAATGGTCTAACTAGTGACACC 1226
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      AGACAAGTTACTCTCAATCAGACTGCATCACGTGATGATGTTCTATTATCGAGAGAAGAA 1286
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      AGGTCCTTTCGGATGTGGATCAACAGTCTTGGGGTTGACTCTTACGTGAACAATGTTTTT 1346
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAAGATGTTCGCCATGGATGGGTACTTCTTGAAGTACTGGACAAAGTTTCTCCAGGATCT 1406
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GTCAATTGGAAGCTGGCCTCGAAACCTCCAATTAAACTACCATTCAGGAAATTGGAGAAT 1466
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TGCAATCAAGTGGTAAAAATCGGAAAGGAGTTAAAGTTTTCCTTAGTAAATTTAGCTGGG 1526
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      AATGATATTGTTCAGGGTAACAAGAAATTGATTGTTACACTTCTGTGGCAATTGATGAGA 1586
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TTTAATATGCTTCAATTGTTGAATAGACTGAGATCCCACTCCCAAGGATCCCAAGGAAAA 1646
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAAATTACTGATGCTGATATACTAAAATGGGCAAACAGCAAAGTGAAAGCATCAGGAAGA 1706
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      ACATCTCAAATGGAAAGCTTCAAGGACAAGAGCTTATCAAATGGACGGTTTTTCCTTGAA 1766
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      CTTCTTAGTGCAGTACAACCGAGGGTTGTCAACTGGAAAGTTGTTACAAAGGGGGAAGAT 1826
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GATGAGGAAAAGAAGCTAAATGCTACATATACCATTAGTGTTGCAAGGAAAATCGGATGT 1886
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TCCGTGTTTCTGCTGCCAGAGGACATCATTGAGGTAAATCAGAAGATGATCCTAACGCTT 1946
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      ACGGCTAGCATCATGTATTGGAGTCTACAGAAGCAACCACAGTCACAATCTGAAACGTCA 2006
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAACAATCAGAGCCATCTAGTATGGCTTCGGATGCAGCTTCTGATATTGCTTCGGAGGAC 2066
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GCTGCTTCAATAACAGCTGCATCTGAGGGAGAAGAGGTGAATTCGCTATCTGATAGTATG 2126
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TCCAATTTGACCACATATGATGCTATTTCAAATGCCCCGCCAGCAGAAAATGGAAATGGT 2186
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GTGGCAGGATGATGATGATTACACGGGCTGTTCTTCTGTCCTGATAGCGGTTTTATTATG 2246
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GTGGAACTAGTACCGTCATGGTGTCCAACGTTTGCTGCCAGAAGTGATTTTTTTCCTGCT 2306
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      TCTGTTCCAAGCCTACTTTTGAGGTAGCATGATAGATACAGATACAGATAGATAGAGTTG 2366
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      CCGTTTGTTCATTTAATTTTGCTCTATACATACGACAGGGAAAAAACTATACATAGGTCA 2426
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      CTAGTTGGGCATTTCTTGTACTCTTAGTATACTTTGATTTCAATGTCTTCACTTTGTTTC 2486
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      CCGGACCTGTCAAAATGTACTGGCATCGTTTGTAATCTGCTGCTGCTCTGGACCATTCAT 2546
consensus_7791#1      ------------------------------------------------------------
                                                                                  

consensus_7791#0      GAGCTGTATATAACATAATATTGTGGAGAGATCTGGTTTCCCAAGAAAAAAAAAAAAA 2604
consensus_7791#1      ----------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)