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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3690 fasta sequence
[TGAATTCCCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCATGTCGTCGCGGCAGGACAAGGAGAAGTCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGGAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGATGGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTGATCTAGCTTCATTTTCTCACATCTACAGTCAATGTGCTGATAGCAGTGTGGTGTGTAAACAGAACAGCTTAAAATAGTAGTAATCGCTTTATTCATATTGGCTAAACAATTGTACAAAAACAAGTAAATAATTCAAATAGGAGGTGCCTAGTACATACCAAAATTATAATGGGTTTGAAGAGTACAAGCTGAAAATTTTTATTAACTCCTTAAAGCTTGTAATTGCATAGTGTGGCCTGCTATTAATATATCGTTTATTTTGTATTCCAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGGTTCGTAAAGTGCTTGTTGTGTATATTTGATATTTGTTCTTGTTTAAAATTGATCTTTTGCTTGGGTTTCAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT-GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT-GGTAGACTAAACTCTC-TTGGTGAC-GCCGCTCGT-GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGTTGAGC]
[+] EMBL AK071334 [TGAATTCCCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCATGTCGTCGCGGCAGGACAAGGAGAAGTCGGTGAACGTCCAGGTCCTCCTCCGCTGCAGGCCGTTCAGCGACGACGAGGTCCGCAGCAACGCGCCCCAGGTCATCACCTGCAACGACTACCAGCGGGAGGTCGCCGTCACGCAGACCATCGCCGGCAAGCAGATCGACCGTGTCTTCACCTTCGACAAGGTGTTTGGCCCGACAGCGAAGCAGAGAGACTTGTATGACCAAGCGATTATCCCTATTGTAAATGAAGTCCTCGAGGGTTTCAATTGCACCATCTTCGCTTATGGCCAGACCGGCACGGGAAAAACATACACCATGGAGGGTGAATGCAGGAGAGCCAAGAGTGGTCCAAAGGGTCAGTTGCCTGCTGATGCTGGAGTCATTCCTAGGGCAGTTAAGCAAATATTTGACACACTGGAGAGCCAGAATACGGAGTACAGTGTTAAGGTCACATTCCTCGAGCTGTACAATGAGGAAATAACTGATCTTCTTGCGCCAGAGGAGATATCTAAGGCTGCCCTTGAAGAACGGCAGAAGAAGCCCTTACCTCTTATGGAGGACGGGAAAGGCGGGGTGCTTGTGAGAGGCCTGGAGGAAGAGATAGTTACGAACGATGGCGAAATATTCTCTCTTTTGGAAAGAGGATCTGCAAAGCGCCGTACTGCAGAGACTCTGTTGAACAAGCAATCCAGTCGTTCACACTCCCTATTCTCAATCACCATTCACATAAAAGAGGCTACTCCTGAAGGAGAAGAATTGATAAAATGTGGGAAGCTTAATTTGGTTGACCTGGCTGGATCAGAGAATATCTCCCGTTCTGGAGCTAGGGAGGGACGAGCTAGAGAGGCTGGTGAAATAAACAAAAGCTTGCTTACTTTAGGTCGCGTTATTACAGCCTTGGTCGAGCACCTTGGACATGTTCCTTACAGGGACAGTAAGCTTACAAGGTTGCTCCGTGATTCACTAGGAGGGAGGACCAAAACTTGCATTATTGCTACTGTTTCACCCTCCGTGCATTGTCTAGAGGAAACATTGAGCACTTTAGATTATGCTCACCGAGCAAAGAGCATCAAAAACAGGCCCGAGGTGATCTAGCTTCATTTTCTCACATCTACAGTCAATGTGCTGATAGCAGTGTGGTGTGTAAACAGAACAGCTTAAAATAGTAGTAATCGCTTTATTCATATTGGCTAAACAATTGTACAAAAACAAGTAAATAATTCAAATAGGAGGTGCCTAGTACATACCAAAATTATAATGGGTTTGAAGAGTACAAGCTGAAAATTTTTATTAACTCCTTAAAGCTTGTAATTGCATAGTGTGGCCTGCTATTAATATATCGTTTATTTTGTATTCCAGGTAAACCAGAAAATGATGAAATCAACATTAATCAAAGATCTTTATGGAGAAATAGATCGACTTAAAGCAGAGGTCTATGCTGCTCGTGAAAAGGTTGGAGTCTACATCCCAAAAGACAGATATCAGCAGGAGGAGAATGAGAGAAAGGCCATGGCTGATCAAATTGAACAGATGACTACTTCGTTGGAAGCAAATCAGAAGGTTCGTAAAGTGCTTGTTGTGTATATTTGATATTTGTTCTTGTTTAAAATTGATCTTTTGCTTGGGTTTCAGCAAATTAATGATCTTCAAGAAAAGTACGACTCAGAGCTTCAACATTCTGCTGATCTAAGCAAAAAGCTTGAAGCCACAGAGAAATGTCTGGACCATACAAGCAACTTACTATCCACAACCAAAGAAGATTTGAAACAAGCCCAGTATAATCTGAAGGAGAAAGATTACATAATCTCTGAGCAGAGAAAAGCAGAAAATGCTTTAATTCAACAAGCCTGTCTTCTGAGATCAGACCTGGAAAAATCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT GGTAGACTAAACTCTC TTGGTGAC GCCGCTCGT GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGTTGAGC]
[+] EMBL AK060581 [ TCTAACCGTGAGAATGCTGCACTCTATTCAAAGATTGCTCGAGGAGATAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGT GGTAGACTAAACTCTC TTGGTGAC GCCGCTCGT GGAAACAAAGCATTTTTGGATGAGCACACGTCCGCCATGGAGGTGGTCACGAAGGACGCCAAAAGAAAGTGGGAAATGTTTGCAGGGCAGGCAGAGAATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATTCTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCAACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCAATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAGCATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCGCGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCATCTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTCCAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAGGTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGACGAGTTCCGCGAGAACCACCCCTACGAGCCGAGCAAGGACCGCAGGCCATCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATGAAAATCCATTGGAAACGCAACGCAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAAGTAGGTCATCAAATGCTGGCTTTTGGTGTCCTTTGGTTGTTGTGGCTCAGTGCCAGTGCCAGTCCAGCTTCTTGTTGTGGGTTGCGAGCTATCTCAGCTTCCCCCGGCGCCCTTACCTAACTTTCTTTCACATTTTATTATTTTGATGTACCAATCTGTTGCTTTTCTGTGTGATTATTGGAGCTGCATAAGAGATTTGT ]
[+] EMBL CF324195 [ TAAACTAAATGCTGCAAATAGGTCAGTGGTGAACTCATTCCAAGCTGACCTTGCTTCAAAGTTGGATATTCTCTCCACTACCCTTGCCACATCTATAGATCAGCAAAATAAACACCTTAAATCTGTGGAGAACTTATGCAAGTCTTGTGTTGATTCCCATGACACGGCTACTTCGGAGATAAAAAAGAAGATTTTGGCTTCAAAGGCACTTTATATGTCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCTACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTAGCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGATCATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTNGCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCA ]
[+] EMBL C28299 [ tngnanTCATCGAAGCGAAGTGGCACATTTCACTCAAGTATT GCGGGAGAGTTTCCGCATTAGCTTGGATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAAACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAAGATTTCCAGAAGGCTTATNAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGACATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTNGGTGGGTAGACTNAACTCTCTTTNGTGACGGCCGCTCCTGGGGAACAA ]
[+] EMBL AA749674 [ TCGCTCATCCCTCGCTCGCCGCTCGCCACCATCAACAACTGATCAAAATCCATTGGAAACGCAAC SAATGCAATCTGTCTCTGTGTGTGTACTAGTGTAATCTTATTAGCCGTAACTAGGTCATCAAATSCTGGCTTTTGGTGTCCTTTGGTTGTT TGGCTCAGTG CAGTGCCAGTCCAGCTTCTTGTTNNNGGTTGCG ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||