cluster # 7797

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7797 cluster # 7797 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7797#0 length = 1999 sequences # 5
consensusID : consensus_7797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1999
fasta sequence
                              [TTCCGGGCGATATCCGGGGCGGCGCTCAGTGCCAACGTATCCACGCCGCTGTCCACGTCCGTGCTGCTGCTGATGCCGGAGGAGTCGTCGGCGTCCGCCACCGCGTCGTCGGGGTTTGAGAGCTCGGAGTCGTTCGCTGCTGTGCCGCTGCAGCCGGTGCCGAGGTTCTCGTCCGGGCCGATCTCCGCGCCCTTCTCCGGCGGGTTCATGTCGGGGCCCTTGGAGAGGGGGTTCCAATCTGGGCCACTCGACGCCGCGCTCCTCTCGGGCCCTCTCCCTGGCACCGCCACCTCCGGTCGTATGGGTGGCGCCGTCCCTGCGCTCCGCCGGAGCCTCTCCCACGGTGGCCGCCGCCTCCGCAATTTCACCCGCGCGCTCCTCGCGCGCACCGAGAAGTTTCAGGATTCTGCGGATCTAGGCTCGCCGGACGCCGCCGCCGCCGCCGTCGCCGCCTGTGGGGGCGATCCCTGTGGTCTGCAGTGGGCGCAGGGGAAAGCCGGCGAGGACCGCGTCCACGTCGTCGTGTCGGAGGAGCGAGGCTGGGTGTTCGTCGGCATCTACGATGGGTTCAACGGCCCCGACGCCACCGACTTCCTGGTATCCAACCTCTACGCCGCCGTCCACCGCGAGCTCCGCGGCCTCCTCTGGGATCAGCGGGAGCAGAACGTGCAGCACGACCAGCGCCCCGACCAACCCGGCTCAGCCCCAAGCACCACGGCCTCAGATAACCAAGACCAGTGGGGTCGCCGCCGCCGCACCCGCCGCTCAAGACCGCCGCGTGGCGCCGACGACGACCAGCGGCGGTGGAAGTGCGAGTGGGAGCAGGAGCGGGATTGCTCCAACCTGAAGCCACCAACGCAGCAGCGTCTTCGTTGCAACAGCGAGAACGACCACGTCGCCGTGCTCAAGGCGCTGACCCGTGCGCTGCACAGGACCGAGGAGGCTTACCTGGACATCGCCGACAAGATGGTCGGCGAGTTCACTGAGCTTGCGCTCATGGGCTCTTGTGTTCTTGCCATGCTCATGAAAGGAGAGGACATGTACATCATGAATGTTGGCGATAGCCGGGCTGTGTTGGCAACAATGGACAGCGTCGATCTCGAGCAGATCAGCCAGGGTTCATTCGATGGATCAGTCGGGGATTGCCCGCCATGCTTGTCGGCCGTGCAGCTCACGTCGGATCACAGCACTTCAGTGGAAGAGGAAGTAATCAGAATACGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGG-TGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGA-TTTGGAG-ATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACGTATAGA---GGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGA--GGTGTTCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTACAATATCAACCAAGCACTGTGGGGGGTTGGATTCGGCTTGGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCTGGCCGCGTGGTATAATATG-TTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTATAAAATCGACCAATTGGTCAACTTTCTTTGACAAAAA]

[+] EMBL AK071722             [TTCCGGGCGATATCCGGGGCGGCGCTCAGTGCCAACGTATCCACGCCGCTGTCCACGTCCGTGCTGCTGCTGATGCCGGAGGAGTCGTCGGCGTCCGCCACCGCGTCGTCGGGGTTTGAGAGCTCGGAGTCGTTCGCTGCTGTGCCGCTGCAGCCGGTGCCGAGGTTCTCGTCCGGGCCGATCTCCGCGCCCTTCTCCGGCGGGTTCATGTCGGGGCCCTTGGAGAGGGGGTTCCAATCTGGGCCACTCGACGCCGCGCTCCTCTCGGGCCCTCTCCCTGGCACCGCCACCTCCGGTCGTATGGGTGGCGCCGTCCCTGCGCTCCGCCGGAGCCTCTCCCACGGTGGCCGCCGCCTCCGCAATTTCACCCGCGCGCTCCTCGCGCGCACCGAGAAGTTTCAGGATTCTGCGGATCTAGGCTCGCCGGACGCCGCCGCCGCCGCCGTCGCCGCCTGTGGGGGCGATCCCTGTGGTCTGCAGTGGGCGCAGGGGAAAGCCGGCGAGGACCGCGTCCACGTCGTCGTGTCGGAGGAGCGAGGCTGGGTGTTCGTCGGCATCTACGATGGGTTCAACGGCCCCGACGCCACCGACTTCCTGGTATCCAACCTCTACGCCGCCGTCCACCGCGAGCTCCGCGGCCTCCTCTGGGATCAGCGGGAGCAGAACGTGCAGCACGACCAGCGCCCCGACCAACCCGGCTCAGCCCCAAGCACCACGGCCTCAGATAACCAAGACCAGTGGGGTCGCCGCCGCCGCACCCGCCGCTCAAGACCGCCGCGTGGCGCCGACGACGACCAGCGGCGGTGGAAGTGCGAGTGGGAGCAGGAGCGGGATTGCTCCAACCTGAAGCCACCAACGCAGCAGCGTCTTCGTTGCAACAGCGAGAACGACCACGTCGCCGTGCTCAAGGCGCTGACCCGTGCGCTGCACAGGACCGAGGAGGCTTACCTGGACATCGCCGACAAGATGGTCGGCGAGTTCACTGAGCTTGCGCTCATGGGCTCTTGTGTTCTTGCCATGCTCATGAAAGGAGAGGACATGTACATCATGAATGTTGGCGATAGCCGGGCTGTGTTGGCAACAATGGACAGCGTCGATCTCGAGCAGATCAGCCAGGGTTCATTCGATGGATCAGTCGGGGATTGCCCGCCATGCTTGTCGGCCGTGCAGCTCACGTCGGATCACAGCACTTCAGTGGAAGAGGAAGTAATCAGAATACGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGG TGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGA TTTGGAG ATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACGTATAGA   GGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGA  GGTGTTCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTACAATATCAACCAAGCACTGTGGGGGGTTGGATTCGGCTTGGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCTGGCCGCGTGGTATAATATG TTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTAT                                    ]
[+] EMBL AK073306             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAGGCTTACCTGGACATCGCCGACAAGATGGTCGGCGAGTTCCCTGAGCTTGCGCTCATGGGCTCTTGTGTTCTTGCCATGCTCATGAAAGGAGAGGACATGTACATCATGAATGTTGGCGATAGCCGGGCTGTGTTGGCAACAATGGACAGCGTCGATCTCGAGCAGATCAGCCAGGGTTCATTCGATGGATCAGTCGGGGATTGCCCGCCATGCTTGTCGGCCGTGCAGCTCACGTCGGATCACAGCACTTCAGTGGAAGAGGAAGTAATCAGAATACGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGTCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGG TGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGA TTTGGAG ATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACGTATAGA   GGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGA  GGTGTTCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTACAATATCAACCAAGCACTGTGGGGGGTTGGATTCG    GGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCTGGCCGCGTGGTATAATATG TTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTATAAAATCGACCAATTGGTCA                 ]
[+] EMBL CF324133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGAGGAAGTAATCAGAATACGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGATCGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGGNTGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGATTTTGGAGAATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACG ATAGAAAGGGGGGTTCTTCCCATGCCTTCCTTGA CTGAAAAGGGTG TCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACT                                                                                                                                                                                          ]
[-] EMBL CB657199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCCAAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATACATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATATTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAAATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGG TGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGA TTTGGAG ATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACGTATAGA   GGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGA  GGTGTTCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTACAATATCAACCAAGCACTGTGGGGGGTTGGATTCGGCTTGGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCTGGCCGCGTGGTATAATATG TTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTATAAAATCGACCAATTGGTCAACT              ]
[+] EMBL BM420818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGAGGAAGTTCTTTTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGG TGATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGA TTTGGAG ATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAAC AAACGTATAGA   GGGGGTTCTTCCCATGCCTTCCTTGAGCTGAGA  GGTGTTCTTGCGGCTACTCTACTCCTCTTCCCCCAGTTGCTACTGTAC ATATCAACCAAGCACTGTGGGGGGTTGGATTCGGCTTGGGCTCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCT GCCGCGTGGTATAATATGTTTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTATAAAATCGACCCATTGGTCAACTTTCTTTGACAAAAA]




>consensus_7797#0
TTCCGGGCGATATCCGGGGCGGCGCTCAGTGCCAACGTATCCACGCCGCTGTCCACGTCC
GTGCTGCTGCTGATGCCGGAGGAGTCGTCGGCGTCCGCCACCGCGTCGTCGGGGTTTGAG
AGCTCGGAGTCGTTCGCTGCTGTGCCGCTGCAGCCGGTGCCGAGGTTCTCGTCCGGGCCG
ATCTCCGCGCCCTTCTCCGGCGGGTTCATGTCGGGGCCCTTGGAGAGGGGGTTCCAATCT
GGGCCACTCGACGCCGCGCTCCTCTCGGGCCCTCTCCCTGGCACCGCCACCTCCGGTCGT
ATGGGTGGCGCCGTCCCTGCGCTCCGCCGGAGCCTCTCCCACGGTGGCCGCCGCCTCCGC
AATTTCACCCGCGCGCTCCTCGCGCGCACCGAGAAGTTTCAGGATTCTGCGGATCTAGGC
TCGCCGGACGCCGCCGCCGCCGCCGTCGCCGCCTGTGGGGGCGATCCCTGTGGTCTGCAG
TGGGCGCAGGGGAAAGCCGGCGAGGACCGCGTCCACGTCGTCGTGTCGGAGGAGCGAGGC
TGGGTGTTCGTCGGCATCTACGATGGGTTCAACGGCCCCGACGCCACCGACTTCCTGGTA
TCCAACCTCTACGCCGCCGTCCACCGCGAGCTCCGCGGCCTCCTCTGGGATCAGCGGGAG
CAGAACGTGCAGCACGACCAGCGCCCCGACCAACCCGGCTCAGCCCCAAGCACCACGGCC
TCAGATAACCAAGACCAGTGGGGTCGCCGCCGCCGCACCCGCCGCTCAAGACCGCCGCGT
GGCGCCGACGACGACCAGCGGCGGTGGAAGTGCGAGTGGGAGCAGGAGCGGGATTGCTCC
AACCTGAAGCCACCAACGCAGCAGCGTCTTCGTTGCAACAGCGAGAACGACCACGTCGCC
GTGCTCAAGGCGCTGACCCGTGCGCTGCACAGGACCGAGGAGGCTTACCTGGACATCGCC
GACAAGATGGTCGGCGAGTTCACTGAGCTTGCGCTCATGGGCTCTTGTGTTCTTGCCATG
CTCATGAAAGGAGAGGACATGTACATCATGAATGTTGGCGATAGCCGGGCTGTGTTGGCA
ACAATGGACAGCGTCGATCTCGAGCAGATCAGCCAGGGTTCATTCGATGGATCAGTCGGG
GATTGCCCGCCATGCTTGTCGGCCGTGCAGCTCACGTCGGATCACAGCACTTCAGTGGAA
GAGGAAGTAATCAGAATACGAAACGAGCATCCTGATGATCCATCTGCCATCTCCAAGGAT
CGCGTGAAGGGCTCGCTGAAGGTGACCAGAGCATTTGGTGCTGGGTTTTTGAAACAGCCC
AAGTGGAATGATGCACTCCTGGAGATGTTCAGAATTGATTACGTTGGGTCCTCCCCATAC
ATATCATGCAATCCATCCCTTTTTCATCATAAGCTCAGCACAAGGGATAGATTCTTGATA
TTATCTTCAGATGGACTTTACCAGTATTTCACCAACGAGGAGGCAGTTGCTCAGGTCGAA
ATGTTCATCGCAACAACCCCTGAAGGCGACCCTGCCCAACATCTTGTGGAGGAAGTTCTT
TTCCGTGCTGCCAACAAAGCAGGAATGGACTTTCATGAACTGATCGAGATACCACATGGT
GATCGTCGGCGATACCATGACGATGTATCTGTCATCGTCATCTCTTTGGAGGGCAGGATT
TGGAGATCCTGCGTGTAAATAGAAACAATAGTAGGCTAGTGAAACAAAACGTATAGAGGG
GGTTCTTCCCATGCCTTCCTTGAGCTGAGAGGTGTTCTTGCGGCTACTCTACTCCTCTTC
CCCCAGTTGCTACTGTACAATATCAACCAAGCACTGTGGGGGGTTGGATTCGGCTTGGGC
TCTCGGCACATCCAGCTGAATCGCCATGAATCGCCCGCAGGGCTGGCCGCGTGGTATAAT
ATGTTGATGTAAATGAGGATTTGTTCAATTATTAATAATTTATAAAATCGACCAATTGGT
CAACTTTCTTTGACAAAAA
clustalw multiple alignements is not computed in this case