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Oryza sativa
cluster # 7804 cluster # 7804       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7804#0 length = 2157 sequences # 4  
consensus_7804#1 length = 1212 sequences # 1  

consensusID : consensus_7804#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2157
fasta sequence
                              [CCGGAGGAATCGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCGATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAGTGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACTCGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTT-CATTGTTCAGAAT-CCACCCTCTGTTCCAACATT-GGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATATCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCTTCTGTGTTACAAAAGCAATGAAACACGAGCTTGATCAAAAATGGGGAATCAACGCAACAGTTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAGTTGTTTAGCAGGTTGGGGAATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTCTGTTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGAAATTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTGGACACCAGATGAAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTGCAACTTTAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGGAAGCAATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATGAAGTATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGGCTTGCATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCATACTTCCTCTTCAGGGCTAGACCTACCTATGAAGGTGGTTGATATGTTCGGTTGTGGATTACCAGTTTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATGGACTTCTTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGTTTCCGGAAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCATCTTCCAAATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAGGTTGAAATGCATGATAACATTCGACAGGTAGGCAAATCATGTATTTGTTACAGCTTGCTTGAACATCTGTTCATTCCAGAGATTATAGGCGCACTGTGCACTTGAGTGAGCATATGGCATATGTACATTTGAAGGTTGGGGAGAGACCATATCATATTTTTGTTTGCTTACACCAAGGCAGGATGTATGACAACTAGAACTGACCCTTTAGTTTGATATAGGACCTGACTCGAATCTCCTTTGATATTTTATTTGGTAAGCAAAAGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTCTATATCTCCAGATCCAACACAATGTCTGGGGAATGAATTCAAGGATGTAAAACATCAGATTCTATATATGTTAGCCTGCAAGAACCGCTACAATATACTATTCTCATTTT]

[+] EMBL CF307097             [CCGGAGGAATCGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCGATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAGTGCGGCGGCGGATCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACTCGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTT CATTGTTCAGAAT CCACCCTCTGTTCCAACATT GGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA753609             [     GGAATCGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCGATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAGTGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACTCGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACCTTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAA CCCTCAATTCCCCTCCATGAAATGAAATCGGTGCAGTTACCACGAATATAAAAGATATCCGGTGCCCTGACCCTGCTACTTAAAGCTGCCTTCCCGTTTATCATATTGATTCGGTACCCTGGTTCCAAGAATCCCCGCCCTGATTTCTTCCTTTGTCCAAAATCCCCCCCCCTGTCCCAACCTTGGGCGGCTGTAAACCTGCCTAcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK069776             [          CGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCGATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAGTGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACTCGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTT CATTGTTCAGAAT CCACCCTCTGTTCCAACATT GGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATATCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCTTCTGTGTTACAAAAGCAATGAAACACGAGCTTGATCAAAAATGGGGAATCAACGCAACAGTTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAGTTGTTTAGCAGGTTGGGGAATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTCTGTTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGAAATTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTGGACACCAGATGAAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTGCAACTTTAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGGAAGCAATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATGAAGTATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGGCTTGCATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCATACTTCCTCTTCAGGGCTAGACCTACCTATGAAGGTGGTTGATATGTTCGGTTGTGGATTACCAGTTTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATGGACTTCTTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGTTTCCGGAAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCATCTTCCAAATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAGGTTGAAATGCATGATAACATTCGACAGGTAGGCAAATCATGTATTTGTTACAGCTTGCTTGAACATCTGTTCATTCCAGAGATTATAGGCGCACTGTGCACTTGAGTGAGCATATGGCATATGTACATTTGAAGGTTGGGGAGAGACCATATCATATTTTTGTTTGCTTACACCAAGGCAGGATGTATGACAACTAGAACTGACCCTTTAGTTTGATATAGGACCTGACTCGAATCTCCTTTGATATTTTATTTGGTAAGCAAAAGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTCTATATCTCCAGATCCAACACAATGTCTGGGGAATGAATTCAAGGATGTAAAACATCAGATTCTATATATGTTAGCCTGCAAGAACCGCTACAATATACTATTCTCATTTT]
[+] EMBL CB625987             [                                                                     AGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAGTGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACTCGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTT CATTGTTCAGAAT CCACCCTCTGTTCCAACATT GGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATATCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCTTCTGTGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_7804#0 CCGGAGGAATCGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCG ATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAG TGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACT CGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGG TGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCG CCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTAT TATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAA TATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATAT TGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTTCATTGTTCAGAATCCAC CCTCTGTTCCAACATTGGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTA TTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATA TCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCT TCTGTGTTACAAAAGCAATGAAACACGAGCTTGATCAAAAATGGGGAATCAACGCAACAG TTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAGT TGTTTAGCAGGTTGGGGAATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTCTG TTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGAAA TTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTGGACACCAGATG AAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTGCAACTT TAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGGAAGC AATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATGAAGT ATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGGCTTG CATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCATACTT CCTCTTCAGGGCTAGACCTACCTATGAAGGTGGTTGATATGTTCGGTTGTGGATTACCAG TTTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATGGACTTC TTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGTTTCCGG AAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCATCTTCCA AATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAGGTTGAA ATGCATGATAACATTCGACAGGTAGGCAAATCATGTATTTGTTACAGCTTGCTTGAACAT CTGTTCATTCCAGAGATTATAGGCGCACTGTGCACTTGAGTGAGCATATGGCATATGTAC ATTTGAAGGTTGGGGAGAGACCATATCATATTTTTGTTTGCTTACACCAAGGCAGGATGT ATGACAACTAGAACTGACCCTTTAGTTTGATATAGGACCTGACTCGAATCTCCTTTGATA TTTTATTTGGTAAGCAAAAGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTG TAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTC TCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGG GGGTGTCTATATCTCCAGATCCAACACAATGTCTGGGGAATGAATTCAAGGATGTAAAAC ATCAGATTCTATATATGTTAGCCTGCAAGAACCGCTACAATATACTATTCTCATTTT



consensusID : consensus_7804#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1212
fasta sequence
                              [AGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTCTATATCTCCAGATCCAACACAATGTACTCTGAATCTGTTCTGATCCATTTGGTGCCCTCTTGTTTATCCTTCTGTGGCGTCGGAACCGTTGGATCACCTTTCATCACAGTATGTGGCAACGCCGGTTTTTCAGGATGCGTGTTCTTGTGCAACAATGACCATATAATCTCACTGACAGTCGCTTCAGGCATCGTCTCCCTGCAGCTCGGCCGGTGCAGGAGGCCACCGAGAGCAGCGGCCATGATCTTCCTGATCGATCTCTGCTTCAGCTTGGCCACCACCTCTCTGCCATTCGTGGAGCTCGACGTGCGGCTCAGTGACCTGCGTTGCCTGCCGCCGCCGCCGCCGCCGTCGTCGTCCTCGCCTCCGGTCACCACCGCCTGAGCTCGAACCAGCAGCCTGAGCTCCTCCTGCAGCCTGTCGAGCTCGTCGGCGCCCGCCGCCGCCGTCGTCCACGGCGTGCCAGAACCATGACGGCCCTTCGGTCCCCCTAACGTGCCTATGGACAGCATCGCCGCCGCCCAGCCGTCGTCGAGCTCGTCGCCGTTCCGGTGGAGATCACCGGAGGTATGAGCGCGTCGAGATGACACTGCAGTGTGATCTTGTTTCCTCGTCCCGTGGAGCCTTGTCTGCACCCAGTTCAGAGCCCTCATGAGCAGTTCTCGTGACCTCTTGTGTGCGAGTTCAGAAGAAAAATGTGGATGAATGGACTCAATGGGAAGAAGAAGATGGATGATGATCCAAGACTCCAAGTTCACTATATATAGGGGTAAACTCTGATCTTGTTGCAACTTTACAGAAGCATGCGTATGCAGGATTGGAGAATGAAGAATTTCTCTCTGACTACTACAGTGTCAAGGTGATTACTGTCACATCTCACAGGAATTATGGCAGAAATGCAGAGCTCAAAGATGAATGGCAGCTTGGTACTCCTTAACATTCCAAATAGGGATCTGGCCTAGTTGAGGAGAGATGAACAGATATTCCATGTGACCAAATTACTCAGGAGATTTGGTTGATATCTTATCTTAGGATAGGCTCAT]

[-] EMBL AK101997             [AGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTCTATATCTCCAGATCCAACACAATGTACTCTGAATCTGTTCTGATCCATTTGGTGCCCTCTTGTTTATCCTTCTGTGGCGTCGGAACCGTTGGATCACCTTTCATCACAGTATGTGGCAACGCCGGTTTTTCAGGATGCGTGTTCTTGTGCAACAATGACCATATAATCTCACTGACAGTCGCTTCAGGCATCGTCTCCCTGCAGCTCGGCCGGTGCAGGAGGCCACCGAGAGCAGCGGCCATGATCTTCCTGATCGATCTCTGCTTCAGCTTGGCCACCACCTCTCTGCCATTCGTGGAGCTCGACGTGCGGCTCAGTGACCTGCGTTGCCTGCCGCCGCCGCCGCCGCCGTCGTCGTCCTCGCCTCCGGTCACCACCGCCTGAGCTCGAACCAGCAGCCTGAGCTCCTCCTGCAGCCTGTCGAGCTCGTCGGCGCCCGCCGCCGCCGTCGTCCACGGCGTGCCAGAACCATGACGGCCCTTCGGTCCCCCTAACGTGCCTATGGACAGCATCGCCGCCGCCCAGCCGTCGTCGAGCTCGTCGCCGTTCCGGTGGAGATCACCGGAGGTATGAGCGCGTCGAGATGACACTGCAGTGTGATCTTGTTTCCTCGTCCCGTGGAGCCTTGTCTGCACCCAGTTCAGAGCCCTCATGAGCAGTTCTCGTGACCTCTTGTGTGCGAGTTCAGAAGAAAAATGTGGATGAATGGACTCAATGGGAAGAAGAAGATGGATGATGATCCAAGACTCCAAGTTCACTATATATAGGGGTAAACTCTGATCTTGTTGCAACTTTACAGAAGCATGCGTATGCAGGATTGGAGAATGAAGAATTTCTCTCTGACTACTACAGTGTCAAGGTGATTACTGTCACATCTCACAGGAATTATGGCAGAAATGCAGAGCTCAAAGATGAATGGCAGCTTGGTACTCCTTAACATTCCAAATAGGGATCTGGCCTAGTTGAGGAGAGATGAACAGATATTCCATGTGACCAAATTACTCAGGAGATTTGGTTGATATCTTATCTTAGGATAGGCTCAT]


>consensus_7804#1 AGGGAAACCCTTTTTTGTAATAGAAGTTGACAACACGTTTTGTAAACAGACATGTACATG TACTGAAGTACGGTCGTACAAAAAAGAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAA AAATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTCTATATCTCCAG ATCCAACACAATGTACTCTGAATCTGTTCTGATCCATTTGGTGCCCTCTTGTTTATCCTT CTGTGGCGTCGGAACCGTTGGATCACCTTTCATCACAGTATGTGGCAACGCCGGTTTTTC AGGATGCGTGTTCTTGTGCAACAATGACCATATAATCTCACTGACAGTCGCTTCAGGCAT CGTCTCCCTGCAGCTCGGCCGGTGCAGGAGGCCACCGAGAGCAGCGGCCATGATCTTCCT GATCGATCTCTGCTTCAGCTTGGCCACCACCTCTCTGCCATTCGTGGAGCTCGACGTGCG GCTCAGTGACCTGCGTTGCCTGCCGCCGCCGCCGCCGCCGTCGTCGTCCTCGCCTCCGGT CACCACCGCCTGAGCTCGAACCAGCAGCCTGAGCTCCTCCTGCAGCCTGTCGAGCTCGTC GGCGCCCGCCGCCGCCGTCGTCCACGGCGTGCCAGAACCATGACGGCCCTTCGGTCCCCC TAACGTGCCTATGGACAGCATCGCCGCCGCCCAGCCGTCGTCGAGCTCGTCGCCGTTCCG GTGGAGATCACCGGAGGTATGAGCGCGTCGAGATGACACTGCAGTGTGATCTTGTTTCCT CGTCCCGTGGAGCCTTGTCTGCACCCAGTTCAGAGCCCTCATGAGCAGTTCTCGTGACCT CTTGTGTGCGAGTTCAGAAGAAAAATGTGGATGAATGGACTCAATGGGAAGAAGAAGATG GATGATGATCCAAGACTCCAAGTTCACTATATATAGGGGTAAACTCTGATCTTGTTGCAA CTTTACAGAAGCATGCGTATGCAGGATTGGAGAATGAAGAATTTCTCTCTGACTACTACA GTGTCAAGGTGATTACTGTCACATCTCACAGGAATTATGGCAGAAATGCAGAGCTCAAAG ATGAATGGCAGCTTGGTACTCCTTAACATTCCAAATAGGGATCTGGCCTAGTTGAGGAGA GATGAACAGATATTCCATGTGACCAAATTACTCAGGAGATTTGGTTGATATCTTATCTTA GGATAGGCTCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7804#0      CCGGAGGAATCGTCCCGTCGTCCGGCGTCCCCCCCTGTATCCCCCTCCCCTCGCACGGCG 60
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      ATCGGATCCAGCGCACGGGTGGGGAAGCAGGCGGCGCCGCTCTCCCCCACGCACCCGAAG 120
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TGCGGCGGCGGAGCAGGAACCTCACTTCTTGGTGGCGGTTGAATCTGAAATTTCCAAACT 180
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      CGGAAGGCTAGTAGGCAATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGG 240
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCG 300
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      CCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTAT 360
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAA 420
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATAT 480
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTTCATTGTTCAGAATCCAC 540
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      CCTCTGTTCCAACATTGGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTA 600
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATA 660
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      TCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCT 720
consensus_7804#1      -------------------------------------------------AGGGAAACCCT 11
                                                                        *      ***

consensus_7804#0      TCTGTGTTACAAAAGCAATGAAACACGAGCT-TGATCAAAAATGGGGAATCAACGCAACA 779
consensus_7804#1      TTTTTGTAATAGAAGTTG-ACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTA 70
                      * * *** * * ***      ******   * * * ** * ***   *   *  * *  *

consensus_7804#0      GTTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAG 839
consensus_7804#1      CGGTCGTACAAAAAA-----GAAACGCTAGTCTCCTCTCTCAAGAAAAGAAAAAAAA--- 122
                            *** *  **       **   *    ****   ***   * *** *** *    

consensus_7804#0      TTGTTTAGCAGGTTGGGGA-ATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTC 898
consensus_7804#1      --ATCCAGGAAATTGTTCTTGTTGCCTCTTTACTGCCACCGGGGGTGTC---TATATCTC 177
                         *  ** *  ***      ** * * * ** *** *  **   ** *   *  ** **

consensus_7804#0      TGTTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGA 958
consensus_7804#1      CAGATCCAACACAATGTACT-CTGAATCTGTTCTG-ATCCATTTGGTGCCCTCTTGTTTA 235
                             **   * ** *   * * * *  * *** **  *   * **      ** * *

consensus_7804#0      AATTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTG-GACACCAG 1017
consensus_7804#1      TCCTTCTGTGGCGTCGGAACCGTTGGATCACCTT-TCATCACAGTATGTGGCAACGCCGG 294
                         **   **  * *  *       * **   ** *** **    * *  *  ** ** *

consensus_7804#0      ATGAAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTG-CA 1076
consensus_7804#1      TT-----TTTCAGGATGCGTGTTCTTGT-GCAACAATG-ACCATATA-ATCTCACTGACA 346
                       *     ****** ** * * *    *  ***   *** ** *** *  * *  *** **

consensus_7804#0      ACTTTAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGG 1136
consensus_7804#1      GTCGCTTCAGGCATCGTCTCCCTGCAGCTCGGCCGGTGCAGGAG-GCCACCGAGAGCAGC 405
                              **     *  **  ** *    **   *    ***  *  * * *** * * 

consensus_7804#0      AAGCAATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATG 1196
consensus_7804#1      GGCCA--TGATCTTCCT--GATCGATCTCTGCTTCAGCTTGGCCACCACCTCTC----TG 457
                         **  *  *** **   **  * * *    *    ** *   *  ****       **

consensus_7804#0      AAGTATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGG 1256
consensus_7804#1      CCATTCGTGGAGCTCGACGTGCGGCTCAG--TGACCTGCGTTGCCTGCCGC-CGCCGCCG 514
                         *  * *****       * ** * *   ***   * ******* ***  *   *  *

consensus_7804#0      CTTGCATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCAT 1316
consensus_7804#1      CCGCCGTCGTCGTCCTCGCCTCC--GGTCACCACCGCCTGAGCTCGAACCAGCAGCCTGA 572
                      *   * **   *  **  ****    *     * ** **** ** *    * **      

consensus_7804#0      ACTTCCTCTTCAGGGCTAGACCTACCTAT-GAAGGTGGTTGATATGTTCGGTTGTGGATT 1375
consensus_7804#1      GCTCCTCCTGCA--GCCTGTCGAGCTCGTCGGCGCCCGCCGCCGCCGTCGTCCACGGCGT 630
                       ** *  ** **  **  * *   *   * *  *   *  *      ***     **  *

consensus_7804#0      ACCAGT-TTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATG 1434
consensus_7804#1      GCCAGAACCATGACGGCCC-TTCGGTCCCCCTAACGTGCCTATGGACAGCATCGCCGCCG 689
                       ****     **  *   * ***     *  * * * ** * *  * *  *        *

consensus_7804#0      GACTTCTTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGT 1494
consensus_7804#1      CCCAGCCGTCGTCGAGCTCGTC--GCCGTTCCGGTGGAG--ATCACCGGAGGTATGAGCG 745
                        *  *  *  ** *  ** **    * * *** ** *   ** *       ** * *  

consensus_7804#0      TTCCGGAAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCAT 1554
consensus_7804#1      CGTCGAGATGACACTGCAGTGTGATCTTGTTTC---CTCGTCCCGTGGAGCCTTG-TCTG 801
                         **  *  *  *       ***  *   *      * ** ** ** *  ** * **  

consensus_7804#0      CTTCCAAATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAG 1614
consensus_7804#1      CACCCAGTTCAGAGCCCTCATGAGCAGTTCTCGTGACCTCTT--GTGTGCGAGTTCAGAA 859
                      *  ***  *    * *   *** * *  *   *    * * *  ***  * ** *** * 

consensus_7804#0      GTTGAA-ATGCATGATAACATTCGACAGGTAGGCAAATCATGTATT-TGTTACAGCTTGC 1672
consensus_7804#1      GAAAAATGTGGATGAATGGACTCAATGGGAAGAAGAAG-ATGGATGATGATCCAAGACTC 918
                      *   **  ** ****    * ** *  ** **   **  *** **  ** * **     *

consensus_7804#0      TTGAACATCTGTTCATTCCAG-AGATTATAGGCGCACTGTGCACTTGAGTGAGCATATGG 1731
consensus_7804#1      CAAGTTCACTATATATAGGGGTAAACTCTGATCTTGTTGCAACTTTACAGAAGCAT---G 975
                              ** *  **    * * * * *   *    **     **     *****   *

consensus_7804#0      CATATGTACATTTGAAGGTTGGGGAGAGACCATATCATATTTTTGTTTGCTT--ACACCA 1789
consensus_7804#1      CGTATGCAGGATTGGAGAATGAAGA------ATTTC---TCTCTGACTACTACAGTGTCA 1026
                      * **** *   *** **  **  **      ** **   * * **  * **       **

consensus_7804#0      AGGCAGGATGTATGACAACTAGAACTGACCCTTTAGTTTGATATAGGACCTGACT-CGAA 1848
consensus_7804#1      AGGTGATTACTGTCACATCTCACAG-GAATTATGGCAGAAATGCAGAGCTCAAAGATGAA 1085
                      ***       * * *** **   *  **    *       **  **  *   *    ***

consensus_7804#0      TCTCC-TTTGATATTTTATTTGGTAAGCAAAAGGGAAACCCTTTTTTGTAATAGAAGTTG 1907
consensus_7804#1      TGGCAGCTTGGTACTC--CTTAACATTCCAAATAGGGATCTGGCCT---------AGTTG 1134
                      *  *   *** ** *    **   *  * ***  *  * *     *         *****

consensus_7804#0      ACAACACGTTTTGTAAACAGACATGTACATGTACTGAAGTACGGTCGTACAAAAAAGAAA 1967
consensus_7804#1      AGGAGAGA-----TGAACAGATAT-TCCATGTGACCAAAT-------TACTCAGGAGATT 1181
                      *  * *       * ****** ** * *****    ** *       ***  *  ***  

consensus_7804#0      CG-CTAGTCTCCTCTCTCAAGAAAAGAAAAAAAAATCCAGGAAATTGTTCTTGTTGCCTC 2026
consensus_7804#1      TGGTTGATATCTTATCTTAGGATAGGCTCAT----------------------------- 1212
                       *  *  * ** * *** * ** * *   *                              

consensus_7804#0      TTTACTGCCACCGGGGGTGTCTATATCTCCAGATCCAACACAATGTCTGGGGAATGAATT 2086
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      CAAGGATGTAAAACATCAGATTCTATATATGTTAGCCTGCAAGAACCGCTACAATATACT 2146
consensus_7804#1      ------------------------------------------------------------
                                                                                  

consensus_7804#0      ATTCTCATTTT 2157
consensus_7804#1      -----------
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)