These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7808#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2192 fasta sequence [ACGACGACTCGCCTGGACGCGCCGCCGCCGTCGCCGCCGCCGCCGCAGCAGCAGCAGCCGCCGGAGATGGAGATGGAGGACATCGAGGACGTGCTGGGGCCGGCCGGGATCGCCGGCGGCGGGGCGGCTCCGGGGCTCCGTCTCCCGCTCGCCGCCGTCGCCGTGAAGCCCAAGCGTCCGAGATCGTCCAGGGTCGCGCAGACCCGGCCGCAGCCCGAGGCCCGGATCCCCGGGACGCAGACGATATATGTGAAGACGTTCGGGTGCTCGCATAACCAGAGTGACAGTGAGTACATGTCAGGGCAGCTGTCAGCGTTTGGATATGCGATCACTGAAGAGCCCGAAGGAGCGGATTTGTGGCTAATTAACACATGCACTGTGAAAAACCCAAGTCAGTCTGCCATGACAACTCTCATATCGAAGTGCAAGAGTGCAAACAAGCCTTTGGTTGTGGCTGGATGTGTACCACAAGGAAGCCGGGATCTGAAAGAGCTTGAAGGTATTAGCGTTATTGGAGTGCAACAGATTGACCGCGTTGTTGAAGTTGTTGAAGAAACCTTAAAAGGCCATGAGGTTCGGTTGTTGAGTCGGAAAACACTGCCCTCACTTGATTTACCTAAGGTAAGGAAGAACAAATTTATCGAGATTCTTCCTATTAATGTTGGGTGTTTGGGTGCTTGCACATACTGCAAGACAAAGCATGCTCGTGGTCATCTTGGAAGCTATACTATAGAAAGTTTGGTAGATCGTGTGAAAATTGTTGTCTCTGAAGGTGTCCGAGAAATATGGTTGAGTAGTGAGGATACTGGTGCTTATGGCAGGGATATCGGTACAAATCTTCCAAATCTATTAAATGGAATTGCTGCTGAGCTTCCTGCGGACAGAAGCACGATGCTTCGCATTGGCATGACCAATCCTCCTTTCATATTGGAGCATTTGAAGGAGATTGCTAGTGTTTTGTGCCATCCCTGTGTTTATTCTTTCCTCCACGTTCCTGTACAATCAGGAAGTGATGCAGTTTTAACGGCAATGAATCGTGAATACACTGTGAGTGAATTCAGGAGGGTAGTTGACACTCTTTGTGAGCTTGTCCCTGGAATGCAAATT-GCTACAGATATTATTTGT-GGATTCCCCGGT-GA-GACT-GATGAGG-A-TTTCTCTCAAACTGTTAACCTTGTAAAACAATATCTATTCCCTCAGGTTCACATATCACAATTCTACCCCAGACCAGGAACACCTGCTGCTAGGATGAAAAAGGTTCCAAGCGTTGAAGTGAAGAAAAGGAGCCGTGAATTGACCTCAGTTTTCGAGTCATTTTCACCCTACCAAGGAATGGAAGGCAAAGTAGAGAGGATATGGATCACTGAAATAGCTACTGATGGTGTTCATTTGGTTGGACATACCAAAGGATATATCCAGGTGCTTGTCATTGCTCCTGATAGCATGTTAGGAACATCAGCAGATGTGAAGATCACATCTGTTGGGAGATGGTCTGTGTTTGGTGAAGTGATAGAAGGATCCGTTGTAGCAAAGGAAACACAGAAGCATAATCACAGTGAACTGCAAGAAGAATACAGGCCAAGTCAGGTTGAGGAAGCCACTTGCTGCGGCACGGACTCTTGTGGTGCCTGCACATGCTCTGATGCAGCACAGCGATGCAATCCCGGTCCAGAGCGATCCGAAAATTCGACGCCCCAATCCTGTGGTGATGCTACTCATCAGGAAGCTGTTCAGTCTAAACTTGTGAGAAGAAATGTTGAAGGAGCGGTGAAAAGTAGCGAAAGTGATACAGCGAAACAGGTAGGGGAGATTCAGCGACTAAATGTAGCAGCTAGGAGGTTCCCAGATGTTGATACGATTCTGTGGGGTGGTTTGGCCGTGAGCTTTGCCACGACAGTAACCCTCATTGCACTGCTAGCTTACAAGATTTCTTCCACGCCCTCCTACTAGTAAGTCTGGTGCATGTGTAACTGTAGTTGAGCTGTGTGTTACTGCTCAGTTTTGACCATTTTTCTGTATCCATCCTCGATCCTTCTGTTTGCCGCAAAGATATGCAATGGAACTGTAATTCATTATTTCAACAAGTTCTCTAATAACCTTTCCCCCCGACCTTTCTAAATAAGTAGAAGATACAATTAGTATTTTTAAGAGTAATGATGACCAAGGAGAGTTGGTGGTCTAAAAAAAAAAGAGAA] [+] EMBL CB630436 [ACGACGACTCGCCTGGACGCGCCGCCGCCGTCGCCGCCGCCGCCGCAGCAGCAGCAGCCGCCGGAGATGGAGATGGAGGACATCGAGGACGTGCTGGGGCCGGCCGGGATCGCCGGCGGCGGGGCGGCTCCGGGGCTCCGTCTCCCGCTCGCCGCCGTCGCCGTGAAGCCCAAGCGTCCGAGATCGTCCAGGGTCGCGCAGACCCGGCCGCAGCCCGAGGCCCGGATCCCCGGGACGCAGACGATATATGTGAAGACGTTCGGGTGCTCGCATAACCAGAGTGACAGTGAGTACATGTCAGGGCAGCTGTCAGCGTTTGGATATGCGATCACTGAAGAGCCCGAAGGAGCGGATTTGTGGCTAATTAACACATGCACTGTGAAAAACCCAAGTCAGTCTGCCATGACAACTCTCATATCGAAGTGCAAGAGTGCAAACAAGCCTTTGGTTGTGGCTGGATGTGTACCACAAGGAAGCCGGGATCTGAAAGAGCTTGAAGGTATTAGCGTTATTGGAGTGCAACAGATTGACCGCGTTGTTGAAGTTGTTGAAGAAACCTTAAAAGGCCATGAGGTTCGGTTGTTGAGTCGGAAAACACTGCCCTCACTTGATTTACCTAAGGTAAGGAAGAACAAATTTATCGAGATTCTTCCTATTAATGTTGGGTGTTTGGGTGCTTGCACATACTGCAAGACAAAGCATGCTCGTGGTCATCTTGGAAGCTATACTATAGAAAGTTTGGTAGATCGTGT ] [+] EMBL AK101879 [ CGTGCTGGGGCCGGCCGGGATCGCCGGCGGCGGGGCGGCTCCGGGGCTCCGTCTCCCGCTCGCCGCCGTCGCCGTGAAGCCCAAGCGTCCGAGATCG CCAGGGTCGCGCAGACCCGGCCGCAGCCCGAGGCCCGGATCCCCGGGACGCAGACGATATATGTGAAGACGTTCGGGTGCTCGCATAACCAGAGTGACAGTGAGTACATGTCAGGGCAGCTGTCAGCGTTTGGATATGCGATCACTGAAGAGCCCGAAGGAGCGGATTTGTGGCTAATTAACACATGCACTGTGAAAAACCCAAGTCAGTCTGCCATGACAACTCTCATATCGAAGTGCAAGAGTGCAAACAAGCCTTTGGTTGTGGCTGGATGTGTACCACAAGGAAGCCGGGATCTGAAAGAGCTTGAAGGTATTAGCGTTATTGGAGTGCAACAGATTGACCGCGTTGTTGAAGTTGTTGAAGAAACCTTAAAAGGCCATGAGGTTCGGTTGTTGAGTCGGAAAACACTGCCCTCACTTGATTTACCTAAGGTAAGGAAGAACAAATTTATCGAGATTCTTCCTATTAATGTTGGGTGTTTGGGTGCTTGCACATACTGCAAGACAAAGCATGCTCGTGGTCATCTTGGAAGCTATACTATAGAAAGTTTGGTAGATCGTGTGAAAATTGTTGTCTCTGAAGGTGTCCGAGAAATATGGTTGAGTAGTGAGGATACTGGTGCTTATGGCAGGGATATCGGTACAAATCTTCCAAATCTATTAAATGGAATTGCTGCTGAGCTTCCTGCGGACAGAAGCACGATGCTTCGCATTGGCATGACCAATCCTCCTTTCATATTGGAGCATTTGAAGGAGATTGCTAGTGTTTTGTGCCATCCCTGTGTTTATTCTTTCCTCCACGTTCCTGTACAATCAGGAAGTGATGCAGTTTTAACGGCAATGAATCGTGAATACACTGTGAGTGAATTCAGGAGGGTAGTTGACACTCTTTGTGAGCTTGTCCCTGGAATGCAAATT GCTACAGATATTATTTGT GGATTCCCCGGT GA GACT GATGAGG A TTTCTCTCAAACTGTTAACCTTGTAAAACAATATCTATTCCCTCAGGTTCACATATCACAATTCTACCCCAGACCAGGAACACCTGCTGCTAGGATGAAAAAGGTTCCAAGCGTTGAAGTGAAGAAAAGGAGCCGTGAATTGACCTCAGTTTTCGAGTCATTTTCACCCTACCAAGGAATGGAAGGCAAAGTAGAGAGGATATGGATCACTGAAATAGCTACTGATGGTGTTCATTTGGTTGGACATACCAAAGGATATATCCAGGTGCTTGTCATTGCTCCTGATAGCATGTTAGGAACATCAGCAGATGTGAAGATCACATCTGTTGGGAGATGGTCTGTGTTTGGTGAAGTGATAGAAGGATCCGTTGTAGCAAAGGAAACACAGAAGCATAATCACAGTGAACTGCAAGAAGAATACAGGCCAAGTCAGGTTGAGGAAGCCACTTGCTGCGGCACGGACTCTTGTGGTGCCTGCACATGCTCTGATGCAGCACAGCGATGCAATCCCGGTCCAGAGCGATCCGAAAATTCGACGCCCCAATCCTGTGGTGATGCTACTCATCAGGAAGCTGTTCAGTCTAAACTTGTGAGAAGAAATGTTGAAGGAGCGGTGAAAAGTAGCGAAAGTGATACAGCGAAACAGGTAGGGGAGATTCAGCGACTAAATGTAGCAGCTAGGAGGTTCCCAGATGTTGATACGATTCTGTGGGGTGGTTTGGCCGTGAGCTTTGCCACGACAGTAACCCTCATTGCACTGCTAGCTTACAAGATTTCTTCCACGCCCTCCTACTAGTAAGTCTGGTGCATGTGTAACTGTAGTTGAGCTGTGTGTTACTGCTCAGTTTTGACCATTTTTCTGTATCCATCCTCGATCCTTC ] [+] EMBL AU056428 [ TTGTTGTCTCTGAAGGTGTCCGAGAAATATGGTTGAGTAGTGAGGATACTGGTGCTTATGGCAGGGATATCGGTACAAATCTTCCAAATCTATTAAATGGAATTGCTGCTGAGCTTCCTGCGGACAGAAGCACGATGCTTCGCATTGGCATGACCAATCCTCCTTTCATATTGGAGCATTTGAAGGAGATTGCTAGTGTTTTGTGCCATCCCTGTGTTTATTCTTTCCTCCACGTTCCTGTACAATCAGGAAGTGATGCAGTTTTAACGGCAATGAATCGTGAATACACTGTGAGTGAATTCAGGAGGGTAGTTGACACTCTTTGTGAGCTTGTCCCTGGAATGCAAATTGGCTACAGATATTATTTGTGGGATTCCCCGGTGGAGGACTGGATGAGGNATTTTCTCTCAAACTGTT ] [-] EMBL CB630437 [ TGATGGTGTTCATTTGGTTGGACATACCAAAGGATATATCCAGGTGCTTGTCATTGCTCCTGATAGCATGTTAGGAACATCAGCAGATGTGAAGATCACATCTGTTGGGAGATGGTCTGTGTTTGGTGAAGTGATAGAAGGATCCGTTGTAGCAAAGGAAACACAGAAGCATAATCACAGTGACCTGCAAGAAGAATACAGGCCAAGTCAGGTTGAGGAAGCCACTTGCTGCGGCACGGACTCTTGTGGTGCCTGCACATGCTCTGATGCAGCACAGCAATGCAATCCCGGTCCAGAGCGATCCGAAAATTCGACGCCCCAATCCTGTGGTGATGCTACTCATCAGGAAGCTGTTCAGTCTAAACTTGTGAGAAGATATGTTGAAGGAGCGGTGAAAAGTAGCGAAAGTGATACAGCGAAACAGGTAGGGGAGATTCAGCGACTAAATGTAGCAGCTAGGAGGTTCCCAGATGTTGATACGATTCTGTGGGGTGGTTTGGCCGTGAGCTTTGCCACGACAGTAACCCTCATTGCACTGGTAGCTTACAAGATTTCTTCCACGCCCTCCTACTAGTAAGTGTGGTGCATGCGTAACTGTAGTTGAGCTGTGTGTTACTGCTCAGTTTTGACCATTTTTTTGTATCCATCCTGGATCCTTCTGTTTGCCGCAAAGATATGCAATGGAACTGTAATTCATTATTTCAACAAGTTCTCTAATAACCTTTCCCCCCGACCTTTCTAAATAAGTAGAAGATACAATTAGTATTTTTAAGAGTAATGATGACCAAGGAGAGTTGGTGGTCTAAAAAAAAAAGAGAA] [+] EMBL AU056429 [ CAGGAAGCTGTTCAGTCTAAACTTGTGAGAAGAAATGTTGAAGGANCGGTGAAAAGTAGCGAAAGTGATACAGCGAAACAGGTAGGGGAGATTCAGCGACTAAATGTAGCAGCTAGGAGGTTCCCAGATGTTGATACGATTCTGTGGGGTGGTTTGGCCGTGAGCTTTGCCACGACAGTAACCCTCATTGCACTGCTAGCTTACAAGATTTCTTCCACGCCCTCCTACTAGTAAGTCTGGTGCATGTGTAACTGTAGTTGAGCTGTGTGTTACTGCTCAGTTTTGACCATTTTTCTGTATCCATCCTCGATCCTTCTGTTTGCCGCAAAGATATGCAATGGAACTGTAATTCATTATCTCAACAAGTTCTCTAATAACCTTTCCCCCCGACCTTTCTAAATAACTAGAAGATACAATTAGTATTTTTAAGATTAATGATGAACAAaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||