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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7811#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2262 fasta sequence
[CTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTCCTCCAGCAGCCCGAGCTCTCCCCCGCCGCCGCGGCCGATGCGGCCCCCGCCACCGATGCCGCGCCGCTCCCGCCGAAGCCGAGCACGGGGAGCCCCTTCTACGGCGAGAACTGGCGGAACCCCGCCGCGGCGGCCAACCCGTCCTCATCCTCCCTCCTCCCCGCGGTCGTCGGCGGCGGCGCGCACGCCCGCGCGGCGGCGTACTCGGCGTCCCCGGGCGCGGCGGAGCTGAAGGAGACGTTCGCGGAGTGGATGGCGGAGCAGCGGTGGGAGGAGATGAAGCAGCTGTTCGAGTTCTGGGTGAGGTCGCTCGACCCGGCGTCCGGGAAGCCCAACCGCCCCGACCTCGACCTCTTCAACCACTACCTCCGCGCGCAGCTCATGTCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGTTCGAGATCACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCCAGGAGGCTGATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAGATGACGAATCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTACTTTGAAATATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTGTTGAGTATGTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAGAGAAGTGCAAGGCTACAGATCAGAACAAAGTCTTGTGTCCACCATGGTCCTGGTGTGTTGAAATAGCAGAAGCTGCTTTTGAAGCTAACAACAGCAAGCTGGGTCTTTTTGCTTTGGAATATCTTGCAAGATGGATTGCTCGTTCTGAGCGTGTTATTCCTCCTCTTCATCTTTCAGTTGATGAAGGTTTAGTACTCTCAGCTCTAAGTGCTGCTGCCAGAACTTGTAGCACTGATCTCCTGAATGCTGCTTGGTCAATATTACGTAAGTCCTTGCACCAGAAAAGGGCACCGACGCCAGAGGCATATCTTGCCAAGATTTATGCTCATTCATCCATTGGTCATCTTCAGCGGGCTTTTGGTACCCTACGTGAATTTGAAAATACCTATGGGAACTTTGAGGATATTGATTCAGAGCTCTTCTCACCGTTCACTTCATTGCGACCACTCGTTGTTGCTTGCTGTAAGGATGGGTACACCACACTGGACTCGGTCTATGTGCAATTGGAGAATTTAAGTTCTGCAGATTCGCCATACAAATCTGTTGCTGCTCTTAACTGTGTTATATTGGGGTGTGCAAACATTTGGGATCTTGAGCGAGCATATGAAACTTTTGAGGCAATAAAAGAAAAGTTTGGACTTACACCTGACATACATTCTTACAATGCGCTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCTTTCAGCATCTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTGACACTCATCTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTGATGCGGGCTTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCAAAGACGCTGCTCCCGTGAATCAGATTTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAATGGGTGGTGAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCGCAAGTACTCCTAGTCCAAGTTGATTTTGATGATGCCGGTGCGCTCTAGTAGACGTAACGTGTACCCTCGCTCACTTTGCTGGTACCTGAAGGGCACGGAAGCTGTAGTCTGTAAATTATACTTCTTTGTACCAA-CTTCCCTAATTATTTCAAGCATCTCAAGCTATCA--TTTTTGTTGGCAGAACCCTCAACAGGA-TTTATGTTAGGATTTCAGAATAAGGGTCCTAATAGAT---TTTTTTTTTTGCCTG-CTC-AAAGCACC-ATGTTTTAC-AATCAA--TGGATG--TTTGCTCAA-CTT-ATC--TCTCAGTT-CCAG--CCTTTTTTACGGCTCTCGTGTTATTTGTTCCTATACTGCATGCCATG]
[+] EMBL AK069667 [CTTCCCCTCTCACTCCCACCTCACTAAAACCCTAGCCCAAACCCCACCTCCTCTCCCGCCATGGCTGCCGCGGCGGCCACCTCCCGCCTCCTCCGCCGCCACCCGCCTCCCCTCCCCCTCCTCCTCCGCTCCTCCATCTCCTCCTCCCGCCCTCTCCTCCAGCAGCCCGAGCTCTCCCCCGCCGCCGCGGCCGATGCGGCCCCCGCCACCGATGCCGCGCCGCTCCCGCCGAAGCCGAGCACGGGGAGCCCCTTCTACGGCGAGAACTGGCGGAACCCCGCCGCGGCGGCCAACCCGTCCTCATCCTCCCTCCTCCCCGCGGTCGTCGGCGGCGGCGCGCACGCCCGCGCGGCGGCGTACTCGGCGTCCCCGGGCGCGGCGGAGCTGAAGGAGACGTTCGCGGAGTGGATGGCGGAGCAGCGGTGGGAGGAGATGAAGCAGCTGTTCGAGTTCTGGGTGAGGTCGCTCGACCCGGCGTCCGGGAAGCCCAACCGCCCCGACCTCGACCTCTTCAACCACTACCTCCGCGCGCAGCTCATGTCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGTTCGAGATCACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCCAGGAGGCTGATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAGATGACGAATCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTACTTTGAAATATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTGTTGAGTATGTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAGAGAAGTGCAAGGCTACAGATCAGAACAAAGTCTTGTGTCCACCATGGTCCTGGTGTGTTGAAATAGCAGAAGCTGCTTTTGAAGCTAACAACAGCAAGCTGGGTCTTTTTGCTTTGGAATATCTTGCAAGATGGATTGCTCGTTCTGAGCGTGTTATTCCTCCTCTTCATCTTTCAGTTGATGAAGGTTTAGTACTCTCAGCTCTAAGTGCTGCTGCCAGAACTTGTAGCACTGATCTCCTGAATGCTGCTTGGTCAATATTACGTAAGTCCTTGCACCAGAAAAGGGCACCGACGCCAGAGGCATATCTTGCCAAGATTTATGCTCATTCATCCATTGGTCATCTTCAGCGGGCTTTTGGTACCCTACGTGAATTTGAAAATACCTATGGGAACTTTGAGGATATTGATTCAGAGCTCTTCTCACCGTTCACTTCATTGCGACCACTCGTTGTTGCTTGCTGTAAGGATGGGTACACCACACTGGACTCGGTCTATGTGCAATTGGAGAATTTAAGTTCTGCAGATTCGCCATACAAATCTGTTGCTGCTCTTAACTGTGTTATATTGGGGTGTGCAAACATTTGGGATCTTGAGCGAGCATATGAAACTTTTGAGGCAATAAAAGAAAAGTTTGGACTTACACCTGACATACATTCTTACAATGCGCTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCTTTCAGCATCTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTGACACTCATCTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTGATGCGGGCTTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCGAAGACGCTGCTCCCGTGAATCAGATTTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAATGGGTGGTGAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCACAAGTACTCCTAGTCCAAGTTGATTTTGATGATGCCGGTGCGCTCTAGTAGACGTAACGTGTACCCTCGCTCACTTTGCTGGTACCTGAAGGGCACGGAAGCTGTAGTCTGTAAATTATACTTCTTTGTACCAA CTTCCCTAATTATTTCAAGCATCTCAAGCTATCA TTTTTGTTGGCAGAACCCTCAACAGGA TTTATGTTAGGATTTCAGAATAAGGGTCCTAATAGAT TTTTTTTTTTGCCTG CTC AAAGCACC ATGTTTTAC AATCAA TGGATG TTTGCTCAA CTT ATC TCTCAGTT CCAG CCTTTTTTACGGCTCTCGTGTTATTTGTTCCTATACTGCATGCCATG]
[+] EMBL CF323776 [ AGTTCTGGGTGAGGTCGCTCGACCCGGCGTCCGGGAAGCCCAACCGCCCCGACGTCGACCTCTTCAACCACTACCTCCGCGCGCAGCTCATGTCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGTTCGAGATCACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCCAGGAGGCTGATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAGATGACGAATCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTACTTTGAAATATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTGTTGAGTATGTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAGAGAAGTGCAAGGCTACAGATCAGAACAAAGTCTTGTGTC ]
[+] EMBL AU225364 [ gCCGCTCGCAGCTCATGTCCGGGGCGCTCCCGATCGAGATGCTGGATCTCGCCGAGCAGATGCGCGAGTTCGAGATCACGCCCAACACGGCCTCCCACAACCTCATCCTCAAGAGCATGGTCCAGGCCCAGGAGGCTGATGGCGCCGAGAAGCTCATTGAGCGGATGTTGCAAACAGGAACTCAACCAGATGACGAATCCTACAATTTGGTTGTAAATCTTCTGATTAAACTGAACCGGGTGGACTCTACTTTGAAATATTTGGATTTGATGCTTAAATCAGGCTACACAATATCTTCCTCTGTTTTTGTTGAGTATGTCCGGGCATGTGTAAGATCTGGTAGATTGGATACATTGGCATCAGTCATAGAGAAGTGCAAGGCTACAGATCAGAACAAA ]
[+] EMBL CB000466 [ CAGAACTTGTAGCACTGATCTCCTGAATGCTGCTTGGTCAATATTACGTAAGTCCTTGCACCAGAAAAGGGCACCGACGCCAGAGGCATATCTTGCCAAGATTTATGCTCATTCATCCATTGGTCATCTTCAGCGGGCTTTTGGTACCCTACGTGAATTTGAAAATACCTATGGGAACTTTGAGGATATTGATTCAGAGCTCTTCTCACCGTTCACTTCATTGCGACCACTCGTTGTTGCTTGCTGTAAGGATGGGTACACCACACTGGACTCGGTCTATGTGCAATTGGAGAATTTAAGTTCTGCAGATTCGCCATACAAATCTGTTGCTGCTCTTAACTGTGTTATATTGGGGTGTGCAAACATTTGGGATCTTGAGCGAGCATATGAAACTTTTGAGGCAATAAAAGAAAAGTTTGGACTTACACCTGACATACATTCTTACAATGCGCTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCTTTCAGCATCTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTGACACTCATCTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTGATGCGGGCTTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCAAAGACGCTGCTCCCGTGAATCAGATTTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAATGGGTGGTGAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCGCcaa ]
[+] EMBL CA766472 [ ACATTCTTACAANGCGCTTTTGCATGCATTTGGAAAGCGGAAAAAGACTGAAGAAGCTTGCAACGTCTTTCAGCATCTAGTAAGCCTTGGTGTTAAGCCAAATGCAACAACTTATGGCCTTCTTGTTGACACTCATCTTGTAAATCGGGACGCAAAAGCTGCTCTTGCTGTAATTGCTGAGATGGTTGATGCGGGCTTTACTCCTTCAAAGGAGACACTTAAGAAGGTCCAAAGACGCTGCTCCCGTGAATCAGATTTTGATAGTGACGAGAAAGTGCAATCCCTGGCTAAGCAGTTTAACTACCGAATGGGTGGTGAAAACCGCAGGGAGATGCTCTTTAACATTGAATACAGCGCTGAGTTCGCAAGTACTCCTAGTCCAAGTTGATTTTGATGGTGCCGGTGCGCTCCAGTAGACGTAACGTGTACCCTCGCTCACTTTGCTGGTACTTGAAGGGCACGGAAGCTGTAGTCTGTAAATTATACTTCTTTGTACCAACCCTCCCTAATTATTTCAAGCATCTCAAGCTATCATNTTTTTGTTGGCAGAACCCTCAACAGGATTTTATGTTAGGATTTCAGAATAANGGTCCTAATACATTNNTTTTTTTTTTTCCTGCCTCAAAAGCNCCAATGTTTTACAAATCAAANGGGATGGNTAGGCTNAACCTTAATCTTTTTCAGTTNCCAGGCCCTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||