These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2481 fasta sequence [CGCGTTAGATTCTGGCGTGATCTGAGCCATGAGTCCATCCATGGCCCCAACCTAGCTAGTGCGTGTTGTGTTCTTTAGTTGGTCGCCACACGGGCAATGCCAAAGTAAAGCCAGGCATGATGCCGGAGGAGGAGGAGGAGAATATGAGATGAGATGAACACTTAAAAGGAGAAAGAAAGAAGGAGGAGAATATACAAAGGGAAGTTGTTCCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAGAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGTCCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAGGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT-ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG-CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA-AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT-TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC-AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA-CAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACAAAAAAAAAAA] [+] EMBL AK073651 [CGCGTTAGATTCTGGCGTGATCTGAGCCATGAGTCCATCCATGGCCCCAACCTAGCTAGTGCGTGTTGTGTTCTTTAGTTGGTCGCCACACGGGCAATGCCAAAGTAAAGCCAGGCATGATGCCGGAGGAGGAGGAGGAGAATATGAGATGAGATGAACACTTAAAAGGAGAAAGAAAGAAGGAGGAGAATATACAAAGGGAAGTTGTTCCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAGAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGTCCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAGGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTGAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA CAGTGTATGGGCAGCTACTGT ] [+] EMBL AK073520 [ CCCATCTGATCTGATCCATCATCCATCTCAATGTGCAGCAGCAGCAGAAGCAGTGTATTATTCTGTTGTTAGGAGAGAAGTTCAGAGAAGTAGTAGTAGTCCCTATAAGAAAGGGGAAAGAAAAAAAAAAGAAGAAACCCTATCCAAACAAAAACAAAGGGAAGAGAGAAGAAAGTTGGAGACTTGGAGGAGGAACCCTCCACCACCAGCAAAGCCAATAGAGGGATCATCCGCCGTAATCTATCTAGCCATCAATCCATCTCCCTCTCCTCCTCTGCTCTCCATGAAGAGCAAATCCTCCAGGAAGGCCGCCGACGAGGATGAGGCCAAGTCCAAGAAGCTCCGATCCTCCCGCGGCAAGCAGCGGCCTAAGCAGCGCCGGCGAGGCCGCTGCAGCAGCACCTCCTCCCGCTCTGAATCCCCACCCCGCAAGCGCTCCAAGAAGCTCAAGGTCTCTGACAAGAAGAGCACCAAGAACAAGGGCCGCAGACGCCACCACAGTCTTAGCCCCAGCCCCAGCCCTTCATCGTCGTCCGTGAGTTACTCAACGCGCAGCAGCAGCGGTGGCGGCGGCGGCGCTTCTGAGAGGTCGGTGAGCCCACCGCGTAGGAGCCGCTCTAGAGATGTTAGGAAGAAGAAGAAGGAGAGGGGGAGGGACAGCAAGAGGGTGAGGAGGTCAAGAAGATCTACAAGCTATTCAACCAGTGGAGAGAGTAATTCCAGTAGTCGCAGCAGGAGTAGGAGCAATAATAGTAAGAGCAGGAATCGCAAGTCCGGTGGCAATAAGGATCATGCAAGCAGGAATAAGATTGTGCAGGATTATGACAATGGCCATGCTCATCGGGCTGAGAATGTGAAATCTGTTGAGATTGCGGATAGGGATGAGAAAGCCATGGCTGATACCAGCAAGGGGAGCTCTATTGAGATATCTCACTCAATTATTGATCATGAGAAGAATGAGTCCGTTGAGAAGATGGAGAGCGCTCCTACCAAGGATGCTGATGAAACACAAGACATCTTACCTGCTGGTAGTGGAAGCCCTGATGCTCAGGATCTGGAGCTGATTCTCAGGCAGAAAGCTCTTGAGAACTTCAGAAAATTTAGAGGAGCAGCGCTCATGGCAGGCAAGCCGCAAACCAATGGTACAGGGAAGGAAGTGGTAACGGATAGCCCCAAGAGCAGTGACACGAAAATTGCTGAAGCGAGTTCTGTTGACAAACCTTTTCAGAGGCAAAGAAGTGGTCTTTCAGTGAACTGCTCTGTTGGATCCCCTAGATTGGAGGATTTCGGGAACCATATAACTCCTCGAAAGCAGGAAAGCTCCGCTGGCAAGAGCGTTGGCGTTGAATCACCTGGAACATTTTAGGCCGGCAGCACCAGCGGGCGAACTGAGCAGAAAGGAAGCAGTCTAGAACCTACTCGATCAAATTCACAGATTAGGCTACAGGATGGTAGGAGTAGTTCCAGCATAATGCATAGGTTGGGAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACCAAAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACA CAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACA ] [+] EMBL CF323723 [ GAAGCCCTCCAAGGAGCTCTGCCAGCGTGATTCGAAGGTTAGGAAGCAGCGCAGGGGTGAATTATGTGAATGGAAATCCCAGAGTTAGATCAGTTGTGAGCATACCCACTAAGGAAGGGCTTGATAGTGGTACATCTATCACTACCCCTAGTGCTTGTGATAATTCTCCCCCTGTTGAAAACATTAGTGAAGTCAGGCATCCTCCTATTGATACTAACAAAATTGAAGGAACTAAAGGGGATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCT ACTTTGTCAA ] [+] EMBL BQ908701 [ GATGAAAGAAATTCAGGTGAAGCTTCAGCTCCTAATGTTTCTGACTTTGTCAACTGGTGAGGTCAAGGATCAGCCTGGGACTGAGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTG CAGGTCAGTTACAAAGTCTACATACC AAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCA AGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTATGTGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTCNNAAACATGTCATAGTTGTTTCTTTTTTACNGC AAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACN CAGTGTATGGCCAGCTACTGTTGTC ] [+] EMBL BM420891 [ AGGTCAAAGATGGTTCTCAGTTTGAGAAAAAGACATTCTCTAGAATGCATGAGGGAGAAACTGTGCCAGGTCAGTTACCAAGTCTACATACC AAGAAAAGTCCAGCACTTGCAAGGAGGAAGCTACAGCGCTGAAGTTGCCANAGATTGTCACCAAATTCTCATTATTTGTCTTGTCTACACCTTAGTTATGTAGCTGGATATACTTTTACTCTCTGCTGCCATGTAT TGACAATACATGCCTTCCGGAAATCATTCCCACATCAAAATTGCTCATATTTCAGTTTTGATGCTCGATAGCTCAGATAGAAGCCTGGATAGTC AAAACATGTCATAGTTGTTTCTTTTTTACTGCAAAATGAACATTTTGACTGTAACTCGCTCCGAATTCTGACACCAGTGTATGGGCAGCTACTGTTGTCATGGCCTGCAGTGAACTATTGCAATGAATTATTGGACCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||