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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7814 cluster # 7814       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7814#0 length = 758 sequences # 5  

consensusID : consensus_7814#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 758
fasta sequence
                              [AAGAACGAGCTGATCTCTCACTGTCACTGATACACAGTTACACAGAGCTCAGATAGTATAGCGCCACTCCAGATAGTAACCGTTGAGTCGTAGAACATTCGACGACATGGTTTCCAAGAGCTCCATGTCGTCCTCGTTTCTCTTCCTCATGGCGCTGCTGCTCTCCTGCAGCTCCATGAGCACCGCAGCTCGCTACCTGGAGGAGGAGTACCCACAGCTGCCAAAGCCTGAACTGTCGCCGCACCCGGCCATGCCGGAGCTGCCAAAGCCTGAACTTCCGGCGCACCCCGAAGTGCCGGAGCTGCCGCAT-GGCGCCGCCGTGCCGGAGTTGCCAAAGCCCGAGATGCCCAAGGTGCCTGAACTGCCGCACCCCGAAGTGCCGGAGTTGCCGAAGTTGCCTGAACTGCCACACCCCGAAGTGCCGGAGTTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCAAAGCCTGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGT-ATGGTTTTTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTACCATGGAGTAGTGTGTGTGTATTCATGTACAAATCATTAGATCATTAATTAATACAAATAAATATTATAGATTATAAAGTTACCAAATAAAAAAAAAAAAT]

[+] EMBL CF291686             [AAGAACGAGCTGATCTCTCACTGTCACTGATACACAGTTACACAGAGCTCAGATAGTATAGCGCCACTCCAGATAGTAACCGTTGAGTCGTAGAACATTCGACGACATGGTTTCCAAGAGCTCCATGTCGTCCTCGTTTCTCTTCCTCATGGCGCTGCTGCTCTCCTGCAGCTCCATGAGCACCGCAGCTCGCTACCTGGAGGAGGAGTACCCACAGCTGCCAAAGCCTGAACTGTCGCCGCACCCGGCCATGCCGGAGCTGCCAAAGCCTGAACTTCCGGCGCACCCCGAAGTGCCGGAGCTGCCGCATGGGCGCCGCCGTGCCGGAGTTGCCAAAGCCCGAGATGCCCAAGGTGCCTGAACTGCCGCACCCCGAAGTGCCGGAGTTGCCGAAGTTGCCTGAACTGCCACACCCCGAAGTGCCGGAGTTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCAAAGCCTGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGTNATGGTTTTTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTA                                                                                                     ]
[+] EMBL CF291189             [     caAGCTGATCTCTCACTGTCACTGATACACAGTTACACAGAGCTCAGATAGTATAGCGCCACTCCAGATAGTAACCGTTGAGTCGTAGAACATTCGACGACATGGTTTCCAAGAGCTCCATGTCGTCCTCGTTTCTCTTCCTCATGGCGCTGCTGCTCTCCTGCAGCTCCATGAGCACCGCAGCTCGCTACCTGGAGGAGGAGTACCCACAGCTGCCAAAGCCTGAACTGTCGCCGCACCCGGCCATGCCGGAGCTGCCAAAGCCTGAACTTCCGGCGCACCCCGAAGTGCCGGAGCTGCCGCAT GGCGCCGCCGTGCCGGAGTTGCCAAAGCCCGAGATGCCCAAGGTGCCTGAACTGCCGCACCCCGAAGTGCCGGAGTTGCCGAAGTTGCCTGAACTGCCACACCCCGAAGTGCCGGAGTTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCANAGCCTGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTT                                                                                                                                                                                      ]
[-] EMBL CF291687             [                                                           AGCGCCACTCCAGATAGTAACCGTTGAGTCGTAGAACATTCGACGACATGGTTTCCAAGAGCTCCATGTCGTCCTCGTTTCTCTTCCTCATGGCGCTGCTGCTCTCCTGCAGCTCCATGAGCACCGCAGCTCGCTACCTGGAGGAGGAGTACCCACAGCTGCCAAAGCCTGAACTGTCGCCGCACCCGGCCATGCCGGAGCTGCCAAAGCTTGAACTTCCGGCGCACCCCGAAGTGCCGGAGCTGCCGCAT GGCGCCGCCGTGCCGGAGTTGCCAAAGCCCGAGATGCCCAAGGTGCCTGAACTGCCGCACCCCGAAGTGCCGGAGTTGCCGAAGTTGCCTGAACTGCCACACCCCGAAGTGCCGGAGTTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCAAAGCCTGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGT ATGGTTTTTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTACCATGGAGTAGTGTGTGTGTATTCATGTACAAAaaa                                                                 ]
[-] EMBL CF291190             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCAAAGCTTGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGT ATGGTTAGTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTACCATGGAGTAGTGTGTGTGTATTCATGTACAAATCATTAGATCATTAATTAATACAAATAAATATTATAGATTATAAAGTTACCAAATAAAAAA       ]
[+] EMBL CA753766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACTTTCCGGAGCCGGAGGCCAAGCCATGAACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGT ATGGTTTTTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTACCATGGAGTAGTGTGTGTGTATTCATGTACAAATCATTAGATCATTAATTAATACAAATAAATATTATAGATTATAAAGTTAACAAATACCACAAAAAAAT]


>consensus_7814#0 AAGAACGAGCTGATCTCTCACTGTCACTGATACACAGTTACACAGAGCTCAGATAGTATA GCGCCACTCCAGATAGTAACCGTTGAGTCGTAGAACATTCGACGACATGGTTTCCAAGAG CTCCATGTCGTCCTCGTTTCTCTTCCTCATGGCGCTGCTGCTCTCCTGCAGCTCCATGAG CACCGCAGCTCGCTACCTGGAGGAGGAGTACCCACAGCTGCCAAAGCCTGAACTGTCGCC GCACCCGGCCATGCCGGAGCTGCCAAAGCCTGAACTTCCGGCGCACCCCGAAGTGCCGGA GCTGCCGCATGGCGCCGCCGTGCCGGAGTTGCCAAAGCCCGAGATGCCCAAGGTGCCTGA ACTGCCGCACCCCGAAGTGCCGGAGTTGCCGAAGTTGCCTGAACTGCCACACCCCGAAGT GCCGGAGTTGCCGAAACCTGAATTGCCAGAACACCCCGTGGTGCCAGAGCTCCCAAAGCC TGAGCTGCCACCGTTGCCCAAGCCTGAATTCCACTTTCCGGAGCCGGAGGCCAAGCCATG AACGATCGGAGCATATCCGCGTAGCGCGCGCCATTTTATCTATACTGAATAATATGTATG GTTTTTATTTGCGATGGTCTACTATTTGCACTTGTATAATGCATGATTACATGTTTACCA TGGAGTAGTGTGTGTGTATTCATGTACAAATCATTAGATCATTAATTAATACAAATAAAT ATTATAGATTATAAAGTTACCAAATAAAAAAAAAAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)