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Oryza sativa
cluster # 7828 cluster # 7828       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7828#0 length = 1585 sequences # 3  
consensus_7828#1 length = 1391 sequences # 2  

consensusID : consensus_7828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1585
fasta sequence
                              [TATGCTCTTCCTCCCGCGCCAACTCGCCCTCTCCGCCGCCGCCGCCGCCGCCGCCATGGCCAAGGAGGAGTCGAGGAAGGAGAAGAAGGCCAAGACCAAGGCGGCGTCCTCCGCCGCCGCCGTCCCCGACGCGAGGAGGGCCGCCGTGGTGGCCGCGGTCGCCGCCTTCCTCGAGTCCAGCGGCTTCCCCCGCGCGCTCGCCGCGCTCCAGTCCGAGGCCAACCTCGAGGCGGGTTCTTGGCGGTCGTCGCCGGTGAGCCTGGAAGAGTTGGTTTCCGGATTCTTGGAGGACTCGAGCAATTATGCTCCAGGAGCCAGCATCAATGGGAGTATCGAGCACGAGAAAACAGCCGCCGTTGTCGCGGAAGATGCTGGCAAGAAGAAGAAAAAGAAAGGCAGTGACACGAAAGTGAGTGAAGCTGAGAACAAGGTGGCTGAGCCTTCTGCCGTGGAAAAGCCCAGTGAAAATGCGGATGTCGAGACCAAAGAAAAGAAACAGAAGAAGAAAAGCAAGAAACAAGAAAACGACGAGGATGTCGAAGCTAGGCTGGAAAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATTGAAGGAGGATAGCAAGAATGGTTTGGTTGATGTTGCTCCTGTGGAGAAAGGGAAGAAAAAGAAGAAAGGAAAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGCTGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGAAAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCCAGCCAGAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAACCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAATACAAAGTGCAA]

[+] EMBL AK101273             [TATGCTCTTCCTCCCGCGCCAACTCGCCCTCTCCGCCGCCGCCGCCGCCGCCGCCATGGCCAAGGAGGAGTCGAGGAAGGAGAAGAAGGCCAAGACCAAGGCGGCGTCCTCCGCCGCCGCCGTCCCCGACGCGAGGAGGGCCGCCGTGGTGGCCGCGGTCGCCGCCTTCCTCGAGTCCAGCGGCTTCCCCCGCGCGCTCGCCGCGCTCCAGTCCGAGGCCAACCTCGAGGCGGGTTCTTGGCGGTCGTCGCCGGTGAGCCTGGAAGAGTTGGTTTCCGGATTCTTGGAGGACTCGAGCAATTATGCTCCAGGAGCCAGCATCAATGGGAGTATCGAGCACGAGAAAACAGCCGCCGTTGTCGCGGAAGATGCTGGCAAGAAGAAGAAAAAGAAAGGCAGTGACACGAAAGTGAGTGAAGCTGAGAACAAGGTGGCTGAGCCTTCTGCCGTGGAAAAGCCCAGTGAAAATGCGGATGTCGAGACCAAAGAAAAGAAACAGAAGAAGAAAAGCAAGAAACAAGAAAACGACGAGGATGTCGAAGCTAGGCTGGAAAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATTGAAGGAGGATAGCAAGAATGGTTTGGTTGATGTTGCTCCTGTGGAGAAAGGGAAGAAAAAGAAGAAAGGAAAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGCTGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGAAAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCCAGCCAGAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAACCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAATACAAAGTGCAA]
[+] EMBL AK058205             [          CTCCCGCGCCAACTCGCCCTCTCCGCCGCCGCCGCCGCCGCCGCCATGGCCAAGGAGGAGTCGAGGAAGGAGAAGAAGGCCAAGACCAAGGCGGCGTCCTCCGCCGCCGCCGTCCCCGACGCGAGGAGGGCCGCCGTGGTGGCCGCGGTCGCCGCCTTCCTCGAGTCCAGCGGCTTCCCCCGCGCGCTCGCCGCGCTCCAGTCCGAGGCCAACCTCGAGGCGGGTTCTTGGCGGTCGTCGCCGGTGAGCCTGGAAGAGTTGGTTTCCGGATTCTTGGAGGACTCGAGCAATTATGCTCCAGGAGCCAGCATCAATGGGAGTATCGAGCACGAGAAAACAGCCGCCGTTGTCGCGGAAGATGCTGGCAAGAAGAAGAAAAAGAAAGGCAGTGACACGAAAGTGAGTGAAGCTGAGAACAAGGTGGCTGAGCCTTCTGCCGTGGAAAAGCCCAGTGAAAATGCGGATGTCGAGACCAAAGAAAAGAAACAGAAGAAGAAAAGCAAGAAACAAGAAAACGACGAGGATGTCGAAGCTAGGCTGGAAAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATTGAAGGAGGATAGCAAGAATGGTTTGGTTGATGTTGCTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CA999456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAATCATCTGAACCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAA            ]


>consensus_7828#0 TATGCTCTTCCTCCCGCGCCAACTCGCCCTCTCCGCCGCCGCCGCCGCCGCCGCCATGGC CAAGGAGGAGTCGAGGAAGGAGAAGAAGGCCAAGACCAAGGCGGCGTCCTCCGCCGCCGC CGTCCCCGACGCGAGGAGGGCCGCCGTGGTGGCCGCGGTCGCCGCCTTCCTCGAGTCCAG CGGCTTCCCCCGCGCGCTCGCCGCGCTCCAGTCCGAGGCCAACCTCGAGGCGGGTTCTTG GCGGTCGTCGCCGGTGAGCCTGGAAGAGTTGGTTTCCGGATTCTTGGAGGACTCGAGCAA TTATGCTCCAGGAGCCAGCATCAATGGGAGTATCGAGCACGAGAAAACAGCCGCCGTTGT CGCGGAAGATGCTGGCAAGAAGAAGAAAAAGAAAGGCAGTGACACGAAAGTGAGTGAAGC TGAGAACAAGGTGGCTGAGCCTTCTGCCGTGGAAAAGCCCAGTGAAAATGCGGATGTCGA GACCAAAGAAAAGAAACAGAAGAAGAAAAGCAAGAAACAAGAAAACGACGAGGATGTCGA AGCTAGGCTGGAAAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGGACACATT GAAGGAGGATAGCAAGAATGGTTTGGTTGATGTTGCTCCTGTGGAGAAAGGGAAGAAAAA GAAGAAAGGAAAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGC TGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGA AAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAA AGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGA GACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCG GAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCCAGCCA GAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAA ATCATCTGAACCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATT TGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTA TGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAA GACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAAT CAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTA CCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATG CTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAG TGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATT TTGCCACTGCTAATACAAAGTGCAA



consensusID : consensus_7828#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1391
fasta sequence
                              [AAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGCTGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGAAAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCTAGCCAGAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAAGTATGTTATAGTCTGTTTCTTTCGTTGCCTTGTGTTATTTCCTACTTTAGTGCAATTTGTTCCTGTTATGTTTATGAACCACAAAGCCTGTCATCTAGAAATTTTAGGCAAACTATGACATGATCAGTAAGTATATGTTTTGTGTTAGTCATGGATCAACTTCTTTCTTTTCTGACATTTACTAGTATTTCAGAATAACCAAATAATGTTGTATCGGACAGTGGATATTTGTAGTTAGTTTGTTACTATCATTGCGATGGTGATTTCCTCATACGTTCTGGTGATGCCCTGACATTAAGGTGGTTTATCATTTCCATGTCTTGTATATTGACTAACAATAACATCATTTTGATCTTACTATTTAGCATTCACTTCTGATAATAGTTTTATAGATGTCTCGGTTATGGATATCTTTGATGTCTGGGAAATGCTTGTAATCTGATTGTCCATGCCATCTCTGTCCACTGCAGCCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAATACAAAGTGCAAGAGTAT]

[+] EMBL CB662130             [AAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGCTGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGAAAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCTAGCCAGAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAAGTATGTTATAGTCTGTTTCTTTCGTTGCCTTGTGTTATTTCCTACTTTAGTGCAATTTGTTCCTGTTATGTTTATGAACCACAAAGCCTGTCATCTAGAAATTTTAGGCAAACTATGACATGATCAGTAAGTATATGTTTTGTGTTAGTCATGGATCAACTTCTTTCTTTTCTGACATTTACTAGTATTTCAGAATAACCAAATAATGTTGTATCGGACAGTGGATATTTGTAGTTAGTTTGTTACTATCATTGCGATGGTGATTTCCTCATACGTTCTGGTGATGCCCTGACATTAAGGTGGTTTATCATTTCCATGTCTTGTATATTGACTAACAATAACATCATTTTGATCTTACTATTTAGCATTCACTTCTGATAATAGTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB662131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACTTCTTTCTTTTCTGACATTTACTAGTATTTCAGAATAACCAAATAATGTTGTATCGGACAGTGGATATTTGTAGTTAGTTTGTTACTATCATTGCGATGGTGATTTCCTCATACGTTCTGGTGATGCCCTGACATTAAGGTGGTTTATCATTTCCATGTCTTGTATATTGACTAACAATAACATCATTTTGATCTTACTATTTAGCATTCACTTCTGATAATAGTTTTATAGATGTCTCGGTTATGGATATCTTTGATGTCTGGGAAATGCTTGTAATCTGATTGTCCATGCCATCTCTGTCCACTGCAGCCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAATACAAAGTGCAAGAGTAT]


>consensus_7828#1 AAATCAACTCCTGAGACATCAGATAAGGTTGACACAGGAAGTACAGATGCTGGGGCTGAT TGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGACAACAATGAAAAGAAAAGT AAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCA GGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAGTGGAATGGAGACTGAGAAG GGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGGCAAAAAGCGGAAACTAGAA GAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACACAGCTAGCCAGAAGCTCAGC AATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAA GTATGTTATAGTCTGTTTCTTTCGTTGCCTTGTGTTATTTCCTACTTTAGTGCAATTTGT TCCTGTTATGTTTATGAACCACAAAGCCTGTCATCTAGAAATTTTAGGCAAACTATGACA TGATCAGTAAGTATATGTTTTGTGTTAGTCATGGATCAACTTCTTTCTTTTCTGACATTT ACTAGTATTTCAGAATAACCAAATAATGTTGTATCGGACAGTGGATATTTGTAGTTAGTT TGTTACTATCATTGCGATGGTGATTTCCTCATACGTTCTGGTGATGCCCTGACATTAAGG TGGTTTATCATTTCCATGTCTTGTATATTGACTAACAATAACATCATTTTGATCTTACTA TTTAGCATTCACTTCTGATAATAGTTTTATAGATGTCTCGGTTATGGATATCTTTGATGT CTGGGAAATGCTTGTAATCTGATTGTCCATGCCATCTCTGTCCACTGCAGCCCAAAACTG TGAATGCATTTCAACGGGTGAAACTAGAGGATGTTAAATTTGCTGATGATAGGCTTCAGG ATAACTCATATTGGGCTAAGGGTGGTGCAGACTCTGGGTATGGTGCAAAGGCACAAGAGG TTCTTGGGCAAGTTAGAGGAAGGGGCTTTAGACATGAGAAGACCAAGAAGAAGCGTGGAA CCTACAGGGGTGGGCAGATCGATTTACAAACCCACTCAATCAAGTTCAACGATTCAGATG ACGAGTGATCGCTTCAATTTTGCGAGTCGCTCACAGTTTACCATTCTTGCCATCGTTTAC ATGATGATCAGCCTTCAGAAAGAATGAACTGGAGGGAATGCTGCGTGTGTGGCGAATTCA GGAGGAACATGAAATTGCTTTATTATGCCCATTTTGTTAGTGCTGGGTGCCCTGCTAAAT CATCAAAATTTTGTATTGATACTCACTGAGATGTATCATTTTGCCACTGCTAATACAAAG TGCAAGAGTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7828#0      TATGCTCTTCCTCCCGCGCCAACTCGCCCTCTCCGCCGCCGCCGCCGCCGCCGCCATGGC 60
consensus_7828#1      ------------------------------------------------------------
                                                                                  

consensus_7828#0      CAAGGAGGAGTCGAGGAAGGAGAAGAAGGCCAAGACCAAGGCGGCGTCCTCCGCCGCCGC 120
consensus_7828#1      ------------------------------------------------------------
                                                                                  

consensus_7828#0      CGTCCCCGACGCGAGGAGGGCCGCCGTGGTGGCCGCGGTCGCCGCCTTCCTCGAGTCCAG 180
consensus_7828#1      -------------AAATCAACTCCTGAGACATCAGATAAGGTTGACA-CAGGAAGTACAG 46
                                   *      *  * * *    * *     *  * *  *    *** ***

consensus_7828#0      CGGCTTCCCCCGCGCGCTCGCCGCGCTCCAGTCCGAGGCCAACCTCGAGGCGGGTTCTTG 240
consensus_7828#1      ATGCTG-------GGGCTGATTGTGC-CAAGGGAAAGGGTGATGCTGCAGAGA-----TG 93
                        ***        * ***    * ** * **    ***   *    *  * *      **

consensus_7828#0      GCGGTCGTCGCCGGTGAGCCTGGAAGAGTTGGTTTCCGGATTCTTGGAGGACTCGAGCAA 300
consensus_7828#1      GAGAAAGACAACAATGAAA--AGAAAAGTAAA-----AAGAAGCTGAAGAAGTCCAAGGA 146
                      * *   * *  *  ***     *** ***               ** ** * ** *   *

consensus_7828#0      TTATGCTCCAGGAGCCAGCATCAATGGGAGTATCGAGCACGAGAAAACAGCCG---CCGT 357
consensus_7828#1      AAACGTTGAGGTGGTTGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAA 206
                        * * *   *  *     * *** *    *   * * * **   * *  *     *   

consensus_7828#0      TGTCGCGGAAGATGCTGGCAAGAAGAAGAAAAAGAAAGGCAGTGACACGAAAGTGAGTGA 417
consensus_7828#1      TGATGAGAACAATAGTGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGA 266
                      **  * * *  **  *** * * ***   * ***   *  * **  * *      *****

consensus_7828#0      AGCTGAGAACAAGGTGGCTGAGCCTTCTGCCGTGGAAAAGCCCAGTGAAAATGCGGATGT 477
consensus_7828#1      TAATGCGGT--AGTTGGCAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGC----AACCT 320
                         ** *    ** ****  *         *  * * *** * *  ***       *  *

consensus_7828#0      CGAGACCAAAGAAAAGAA-ACAGAAGAAGAAAAGCAAGAAACAAGAAAACGAC-GAGGAT 535
consensus_7828#1      CCCTGCTAAAGAAGATAACACAGCTAGCCAGAAGCTC--AGCAATGGTTCTTCAGAGGAT 378
                      *    * ****** * ** ****      * ****    * ***     *  * ******

consensus_7828#0      GTCGAAGCTAGGCTGGA--AAAGGCAGAATCGGCTATCATTAACAAATTTGAGACCGTGG 593
consensus_7828#1      GATGGTGCCAAACCGAATAAAAGGCAGAAAAAATCATCTGAAGTATGTTATAGTCTGTTT 438
                      *  *  ** *  * * *  **********      ***   *  *  **  ** * **  

consensus_7828#0      ACA-CATTGAAGGAGGATAGCAAGAATGGTTTGGTTGATGTTGCTCCTGTGGAGAAAGGG 652
consensus_7828#1      CTTTCGTTGCCTTGTGTTATTTCC--TACTTTAGTGCAATTTGTTCCTGTTATGTTTATG 496
                          * ***      * **       *  *** **  *  *** ******   *     *

consensus_7828#0      AAGAAAAAGAAGAAAGGAAAATCAACTCCTGAGACATCAGATAAGGT-TGACACAGGAAG 711
consensus_7828#1      AACCACAAA-------GCCTGTCA--TCTAGAAATTTTAGGCAAACTATGACATGATCAG 547
                      **  * **        *    ***  **  ** *  * **  **  * *****     **

consensus_7828#0      TACAGATGCTGGGGCTGATTGTGCCAAGGGAAAGGGTGATGCTGCAGAGATGGAGAAAGA 771
consensus_7828#1      TAAGTATATGTTTTGTGTTAGTCATGGATCAACTTCTTTCTTTTCTGACATTTACTAGTA 607
                      **   **        ** * **        **    *     * * ** **  *  *  *

consensus_7828#0      CAACAATGAAAAGAAAAGTAAAAAGAAGCTGAAGAAGTCCAAGGAAAACGTTGAGGTGGT 831
consensus_7828#1      TTTCA-------GAATAACCAAATAATGTTGTATCGGAC-AGTGGATATTTGTAGTTAGT 659
                         **       *** *   ***  * * ** *   * * *  * * *  *  ** * **

consensus_7828#0      TGAAAACAAAGAAGTTGCAGGGAAAGATTCAGCTCCTAAATCAAATGATGAGAACAATAG 891
consensus_7828#1      TTGTTACTATCA--TTGCGATGGTGATTTC--CTCATACGTTC--TGGTGATGCC----- 708
                      *    ** *  *  ****   *     ***  *** **  *    ** ***   *     

consensus_7828#0      TGGAATGGAGACTGAGAAGGGGGAAAATGGAATGCCTCCAAGTGATAATGCGGTAGTTGG 951
consensus_7828#1      -----CTGACATTAAGGTGG-------TTTATCATTTCCATGTCTTG-TATATTGACTAA 755
                             ** * * **  **       *  *     **** **  *  *    *   *  

consensus_7828#0      CAAAAAGCGGAAACTAGAAGAAGTCGAAGGAAGCAACCTCCCTGCTAAAGAAGATAACAC 1011
consensus_7828#1      CAATAA-CATCATTTTGATCTTACT--ATTTAGCA--TTCACTTCTGATAATAGTTTTAT 810
                      *** ** *   *  * **         *   ****   ** ** ** *  *   *   * 

consensus_7828#0      AGCCAGCCAGAAGCTCAGCAATGGTTCTTCAGAGGATGATGGTGCCAAACCGAATAA--A 1069
consensus_7828#1      AGATGTCTCGGTTAT-GGATATCTTTGATGTCTGGGAAATGCTTGTAATCTGATTGTCCA 869
                      **    *  *    *  *  **  **  *    **   *** *   ** * ** *    *

consensus_7828#0      AGGCAGAAAAAATCATCTGAACCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAG 1129
consensus_7828#1      TGCCATCTCTGTCCACTGCAGCCCAAAACTGTGAATGCATTTCAACGGGTGAAACTAGAG 929
                       * **        **    * ***************************************

consensus_7828#0      GATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCA 1189
consensus_7828#1      GATGTTAAATTTGCTGATGATAGGCTTCAGGATAACTCATATTGGGCTAAGGGTGGTGCA 989
                      ************************************************************

consensus_7828#0      GACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTT 1249
consensus_7828#1      GACTCTGGGTATGGTGCAAAGGCACAAGAGGTTCTTGGGCAAGTTAGAGGAAGGGGCTTT 1049
                      ************************************************************

consensus_7828#0      AGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAA 1309
consensus_7828#1      AGACATGAGAAGACCAAGAAGAAGCGTGGAACCTACAGGGGTGGGCAGATCGATTTACAA 1109
                      ************************************************************

consensus_7828#0      ACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCG 1369
consensus_7828#1      ACCCACTCAATCAAGTTCAACGATTCAGATGACGAGTGATCGCTTCAATTTTGCGAGTCG 1169
                      ************************************************************

consensus_7828#0      CTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAAC 1429
consensus_7828#1      CTCACAGTTTACCATTCTTGCCATCGTTTACATGATGATCAGCCTTCAGAAAGAATGAAC 1229
                      ************************************************************

consensus_7828#0      TGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCC 1489
consensus_7828#1      TGGAGGGAATGCTGCGTGTGTGGCGAATTCAGGAGGAACATGAAATTGCTTTATTATGCC 1289
                      ************************************************************

consensus_7828#0      CATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGA 1549
consensus_7828#1      CATTTTGTTAGTGCTGGGTGCCCTGCTAAATCATCAAAATTTTGTATTGATACTCACTGA 1349
                      ************************************************************

consensus_7828#0      GATGTATCATTTTGCCACTGCTAATACAAAGTGCAA------ 1585
consensus_7828#1      GATGTATCATTTTGCCACTGCTAATACAAAGTGCAAGAGTAT 1391
                      ************************************      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)