cluster # 7829

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Oryza sativa
cluster # 7829 cluster # 7829 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7829#0 length = 1765 sequences # 5
consensusID : consensus_7829#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1765
fasta sequence
                              [ATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACACCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTTATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAATGATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAGGAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCACATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACTTTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA-GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAGTCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCGATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTTCTTCATCTTTTCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGAGAAATTTGTCGATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAATTTTTTTTCCATTGTTCGGTGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTGTATATATGTAATGTACGTATCTCGTACATCGTTAA]

[+] EMBL AK107523             [ATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACACCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTTATTGGGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAATGATTTGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAGGAAAAACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCACATTCACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACTTTGAGCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAGTCTGAGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCGATATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTTCTTCATCTTTTCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGAGAAATTTGTCGATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAATTTTTTTTCCATTGTTCGGTGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTGTATATATGTAATGTACGTATCTCGTACATCGTTAA]
[+] EMBL AU068288             [                     CATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGGCCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCGGCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCAAGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGA  NCGACCACCTCGCGGCCTTCGTCAAGATCCAGCACGACTTCATGGTCTCCCGCNTCGGCCGCCTCCAGTCCTCCCTGCAGCAGGCGAGGAAGGCGGACGCCATCAGGAAGAGGTATGAGGCGGCCAACATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF323365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGAACCAGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAGCACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATATCAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCA GACAGCATGCATCAAGTTCAAAACAGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C26717               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTAAGAAGAAAAAAATAGAGGCAGCACAAGNTACTGAAGCTGCACAAAAGCTTCAGAAGANTTTAGAAGAGCTGCAAGATCAAAATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAANTGAACATATCANTTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAATTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACCAGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCANCAAATTTGCAAGCCACACCGCCTGGGAGAAAAGTGAGGTTTTCCAGGACAGCATGCATCANGTTC AAACAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU068289             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACGATGTTCCGCAAGGCAGCAGGCGAAATCCTCTGNATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCAATATTCCGGGTTCCAAAGGTGAAGNCCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCCCCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCTGTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCATCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGCAGCTCTTGAACAAAAAAAAAAAAaaaaaaaa                                                                                                                                                                                                                                          ]




>consensus_7829#0
ATCCTCTCCCCTCCCGTCTCTCATCCTTCTCCCTTTCCAAATTTCAAAATCCATCCATGG
CCGGCGGCGGCGGCGGCCGTGGGCGCGGCGCGAGGGTGGCCGCGCCGGCGGGGGACAGCG
GCAAGGGCGCCCAGGCGGAGTGGCTGCGGATCTACGACGGGATCGTGGCGATGCTGCGCA
AGACGCAGGCGCAGGTGGAGGAGCTCGTCGCGGAGCGCGACCACCTCGCGGCCTTCGTCA
AGATCCAGCACGACTTCATGGTCTCCCGCGTCGGCCGCCTCCAGTCCTCCCTGCAGCAGG
CGAGGAAGGCGGACACCATCAGGAAGAGGTATGAGGCGGCCAACATGGAGATCCTTATTG
GGGACAAGGAGCGGGAGGCCCGCTCCTACCAGAAGATTGCTGAACTCACGGAGAATGATT
TGGAGGACTTCAGAACTTCTATAGCTGCTTTGGCTGCAGAAAACTATGAACTGAAGGAAA
AACTGAAGGAAGTGGAAAGGCATGCAGAACTTGCTGAAAACACTGTTGATCACCACATTC
ACAGTCCAAGAGATTTAAGAGCAGAGTTAAAAAAACTAAAGCACGCCTACAAGACTTTGA
GCTCTGAAAAGGAAAAGGAAGTTTCTGCATTACGTGCAGAAAATGATTTTGTGTGGAACC
AGTTGAGGACAATGGAGAATGATTATACTGATCTCCTTAAGAAGAAAAAAATAGAGGCAG
CACAAGCTACTGAAGCTGCACAAAAGCTTCAGAAGAATTTAGAAGAGCTGCAAGATCAAA
ATAAGGGCAACGAGATCGGCAGATTACAAGCAGAAGCTGTTGATGCCAAAATGAACATAT
CAATTCTTGAGGATAAGCTACAGGAAATGCTTTCCTTGGTGAAGGAGAAAGACTTGGAAA
TTGAACAACTCAAACATGGTCAGCCTATGACCAGTCAGATCAACAAAAAGGATATCAACC
AGAAGAACAGAAAATGTAGGTCCCAAGACCCTCCTTCAAGGGACAAATCAACAAATTTGC
AAGCCACACCGCCTGGGAGAAAAGTGAAGATTTCCAGACAGCATGCATCAAGTTCAAAAC
AGAAGCAAGTCCAGTCAAGAAATAATTCTCGTAGGCAAAAATTAGAAGGTGATAAGTCTG
AGGTTGGCGAAAAGCGGAAGCGTGCCTTGCCATCATCCAGTGGTCTGCAACGATGTTCCG
CAAGGCAGCAGGCGAAATCCTCTGCATCTCCAGTGGTCCAGCCATTACTCTTCTCCCCGA
TATTCCGGGTTCCAAAGGTGAAGACCCCGACTCCTCCATAGCCACAAGCAGTCAGTTCCC
CCCAGGACCAGGTCACCAGGAGCCAGCCACAGTAGGTCTGATATCCTGACTTGTGCAGCT
GTTGATAGGGATTGTGGCACTGACAGTTGATGAGGCTAACCTTAATTCCCAGGAACTGCA
TCTGCATTGCTCCTTTATGCTCCCAGTAGGTCATTGGTGTGTTTGTAGCATACTTGACGC
AGCTCTTGAACAAAAAAAAAAAATGTAGGCTATGTTAGAACGATTTTTTTCTTCATCTTT
TCCTTGTGGAATGCGATGTGTATTATTTAGGCACACACCCTTGGTGGTGAGAAATTTGTC
GATGCCCCATAGTGTCAGATTGGCTTGATCTGAATGAGTTCTGCGTAAATTTTTTTTCCA
TTGTTCGGTGTATGAACTCTGAATGCCAGGAGGCTATGTATTTTGTTGTGTATATATGTA
ATGTACGTATCTCGTACATCGTTAA
clustalw multiple alignements is not computed in this case