cluster # 7833

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7833 cluster # 7833 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7833#0 length = 1681 sequences # 5
consensusID : consensus_7833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1681
fasta sequence
                              [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA]

[+] EMBL AK073587             [TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATAC                                         ]
[+] EMBL AK104985             [   CCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGACCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCTCGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAGGCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGGCTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCT                    ]
[+] EMBL CB648865             [                                        CCGAGACGCCAGGAAACGCCGGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTACCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGGCTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGGCGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCCGCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGAGACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCACCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAAGGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATACCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCTGACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGATCAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGTCATCGAGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB648866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGAGTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCTCGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGGCCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTTCCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCATCAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGGCGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGAGCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAAGGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCGCCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGTCGTGGTCATGAGTGATAAGCCATGAGGTGATCANTGTTGTATTGTGT                                                                          ]
[+] EMBL CA754236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGTATTTGTGGCTACTGGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAAA]




>consensus_7833#0
TCACCAATTCGACCACAGTCACCACAGATCTTCTTCCTTCCCGAGACGCCAGGAAACGCC
GGGAGAAAGCATGGGTTCTCTGGGAGCAGCAGGTAAGCCGCACGCCGTGTGCATGCCGTA
CCCGGCGCAGGGGCACATCACCCCGATGCTGAACGTGGCGAAGCTGCTCCACGCCCGCGG
CTTCGACGTCACGTTCGTGAACACCGAGTACAACCACGCCCGCCTCGTCCGCACCCGCGG
CGAGGCCGCGGTGGCGGGCGCGCCGGGCTTCCGGTTCGCCACCATCCCCGACGGCCTGCC
GCCGTCGGACGACGACGACGTCACGCAGGACATCCCGTCGCTGTGCCGCTCCACCAAGGA
GACCTGCCTTGCCCCCTTCCGCCGCCTCCTCGCCCAGCTGAATGACCCCGCCACGGGCCA
CCCGCCCGTCACCTGCGTCGTCTCCGACGTCGTCATGGGTTTCTCCATGGCTGCCGCCAA
GGAGCTCGGCCTCCCCTACGTCCAGCTCTGGACAGCCAGCTCCATCAGCTATCTCGGATA
CCGTCACTACCGCCTCCTCATGGAACGTGGCCTTGCCCCACTCAAAGATGTCGATCAGCT
GACGAATGGATACCTTGACACGCCGGTGGAAGACGTGCCGGGGCTGAGGAACATGAGGAT
CAAGGACTTCCCGAGCTTCATACACACGACGAACCCGGAGGAGTACATGGTAGGCTACGT
CATCGAGGAGACGGAGCGCTGCAAGGATGCCTCGGCCATCATCGTCAACTCCTTCGGCGA
CCTCGAGGGTGAGGCGGTGGCGGCCATGGAGGCGCTCGGCTTGCCCAAGGTGTACACGCT
CGGGCCGCTGCCGCTGGTGGCGCGCAAGGACCCGCCCTCGCCGCGGCGCTCGTCCATCAG
GCTCAGCCTGTGGAAGGAGCAGGAGGAGTGCCTTCAGTGGCTCGACGGCAAGGAGGCTGG
CTCCGTCGTGTACGTCAACTTCGGCAGCATCACCGTCATGACCAACGAGCAGCTGGTGGA
GTTCGCGTGGGGGCTGGCCAACAGCGGCAGGGAGTTCCTGTGGATCGTCCGGCGCGACCT
CGTCAAGGGCGACACGGCCGTGCTGCCGCCGGAGTTCCTGGCCGAGACGGCGGAGCGCGG
CCTCATGGCGTCCTGGTGCCCGCAGCAGGACGTGCTGAACCACCCCGCCGTGGGCGCGTT
CCTGACGCACAGCGGCTGGAACTCGACGCTGGAGAGCTTGGCCGCCGGCGTGCCCGTCAT
CAGCTGGCCATTCTTCGCCGACCAGCAGACGAACTGCCGGTACCAGTGCAACGAGTGGGG
CGTCGGCATGGAGATCGACAGCAACGTCAAGCGCGGCGCCGTCGCGTGCCTCATCGCTGA
GCTCATGGAAGGTCAGAAGGGGAAGGAGATGAGGAGGAAGGCGGAGGAGTGGAGGGAGAA
GGCGATCAGGGCGGCTAAGCCCGGCGGCTCGTCTCACCGCAACTTCGAAGAGCTGGTCCG
CCACGTGCTCCTGGCCAAAGAGTCGTAGCTCCTCGCGTATGATTTCCTTTGCGCTAGTGT
CGTTGTCATGAGTGATAAGCCATGAGGTGATCAGTGTTGTATTGTGTATTTGTGGCTACT
GGCCTACTGCCTATATATACTGGATGGTGCAATATCACCCTGTTTGATTTAAAAAAAAAA
A
clustalw multiple alignements is not computed in this case