| These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_7836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1123 fasta sequence 
                              [ACCACTAATCCGAAGCGGCTCCCACGCCCGCCGCCCCGCCGCCACGCCGCCATGCGGCTACTCCCCTACGCGCCGTCGCCGCGGCCGCCGCAGCGCTCGCTCGCCACCCGCAGGACCAAGCCAGGGCCGCCGTGCGCGCTCCCCTTCCCCGACGCCCTCCGCGCCGCTGCCGCGGCCACGGCGGCCGCCATGTCCATCTCCCTCTCCCTCCTCACCGGCGACGCCGTGGGGGCGGAGCGGCCGCGGGGCCCCGAGCTCTGCCGCGACGGGGCCGCCGCCGAGACCAAGGAGGAGGTGAGGAGGAGCGAAGTGGTGACGAACGAGCAGCTCGTGGAGGAGGCGTGGGAGGTGGTCAACGAGGGGTTCCTCCCGGACGCCGGAAGCCGTCCCTGGTCGCCGGAGATGTGGATGAAAAAGAAGCAAGATATTGTCCAAACCTCAATCAGATCCCGTTCCAGAGCCCATGATATCATTCAGAAAATGCTGGCTAACCTGGGTGACCCATACACAAGGTTCCTGACTCCCTCCGAATTCTGATGATATTTTGCATGTGTTAAATCAATCTGGTGAAGTTCTCCAAGATGTCAAAATATGACATGACGGGAATAGGATTAAACTTGAGAGAAATTCCTGACGGCAATGGCTCTTCCAAGTTGATGGTATTAGGGCTCATATTAGATGGGCCTGCCCACTCTGCTGGTGTTAGACAGGGTGACGAACTTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCATCCATGTTGCAAGGTCCAAAAGATA-CTTTTGTTACAATTAAGGTTAAGCATGGGAA-CTGTGGTCCTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGATTGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATGCAGTGGCCAAAAAAGATTTGGTTAGTGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCCAGCTGGGATAGAGACTGCAAAGCTCTTCCTGAAGTAAGGAGACACGGTGATTTATACTGCTGG]
[+] EMBL CB636185             [ACCACTAATCCGAAGCGGCTCCCACGCCCGCCGCCCCGCCGCCACGCCGCCATGCGGCTACTCCCCTACGCGCCGTCGCCGCGGCCGCCGCAGCGCTCGCTCGCCACCCGCAGGACCAAGCCAGGGCCGCCGTGCGCGCTCCCCTTCCCCGACGCCCTCCGCGCCGCTGCCGCGGCCACGGCGGCCGCCATGTCCATCTCCCTCTCCCTCCTCACCGGCGACGCCGTGGGGGCGGAGCGGCCGCGGGGCCCCGAGCTCTGCCGCGACGGGGCCGCCGCCGAGACCAAGGAGGAGGTGAGGAGGAGCGAAGTGGTGACGAACGAGCAGCTCGTGGAGGAGGCGTGGGAGGTGGTCAACGAGGGGTTCCTCCCGGACGCCGGAAGCCGTCCCTGGTCGCCGGAGATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB642880             [                                                                                                                                                                                                                                                                                                                      TGGTGACTAACGAGCAGCTCGTGGAGGAGGCGTGGGAGGTGGTCAACGAGGGGTTCCTCCCGGACGCCGGAAGCCGTCCCTGGTCGCCGGAGATGTGGATGAAAAAGAAGCAAGATATTGTCCAAACCTCAATCAGATCCCGTTCCAGAGCCCATGATATCATTCAGAAAATGCTGGCTAACCTGGGTGACCCATACACAAGGTTCCTGACTCCCTCCGAATTCTGATGATATTTTGCATGTGTTAAATCAATCTGGTGAAGTTCTCCAAGATGTCAAAATATGACATGACGGGAATAGGATTAAACTTGAGAGAAATTCCTGACGGCAATGGCTCTTCCAAGTTGATGGTATTAGGGCTCATATTAGATGGGCCTGCCCACTCTGCTGGTGTTAGACAGGGTGACGAACTTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCATCCATGTTGCAAGGTCCAAAAGATA CTTTTGTTACAATTAAGGTTAAGCATGGGAA CTGTGGTCCTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGATTGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATGCAGTGGCCAAAAAAGATTTGGTTAGTGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCCAGCTGGGATAGAGACTGCAAAGCTCTTCCTGAAGTAAGGAGACACGGTGATTTATACTGCTGG]
[+] EMBL CF323200             [                                                                                                                                                                                                                                                                                                                                     AGCTCGTGGAGGAGGCGTGGGAGGTGGTCAACGAGGGGTTCCTCCCGGACGCCGGAAGCCGTCCCTGGTCGCCGGAGATGTGGATGAAAAAGAAGCAAGATATTGTCCAAACCTCAATCAGATCCCGTTCCAGAGCCCATGATATCATTCAGAAAATGCTGGCTAACCTGGGTGACCCATACACAAGGTTCCTGACTCCCTCCGAATTCTGATGATATTTTGCATGTGTTAAATCAATCTGGTGAAGTTCTCCAAGATGTCAAAATATGACATGACGGGAATAGGATTAAACTTGAGAGAAATTCCTGACGGCAATGGCTCTTCCAAGTTGATGGTATTAGGGCTCATATTAGATGGGCCTGCCCACTCTGCTGGTGTTAGACAGGGTGACGAACTTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCATCCATGTTGCAAGGTCCAAAAGATACCTTTTGTTACAATTAAGGTTAAGCATGGGAACCTGTGGTCCTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGAT                                                                                                                                                                                                                                  ]
consensusID : consensus_7836#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 609 fasta sequence 
                              [TTCTATGCATAGAACTTATTGCAAATGGCCATGTAGTATCTAATTCTTAAGCCAAAACTGCTATGCATGTACATATAACTATTTTCCTGGCTCAAACTGTGAGCATCAGGAGAACAACTTAAAATATTGTTTCCCCTTCTGCAAATTGGCCATCTAACGATGCTATTTCAGAACTTAAAATATCGTTTTCCCTTCTGCAAATTGGCCATCTAAGGATGTTATTTCTGCTGATTCTGTATGAAACTATTTTGATGTTACAAAATTTTCCGATATTATTTGTTGATATTCCATTAAAATTATTATCGGTAGATATAACTTAATATAATTACATTGGATGGTGGCATGTTATATCCACTAACATATGTTCTCTTGTGCAGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTTTCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGGTGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTATGCATTTGGATAATGAAAGACACTG]
[+] EMBL CF325751             [TTCTATGCATAGAACTTATTGCAAATGGCCATGTAGTATCTAATTCTTAAGCCAAAACTGCTATGCATGTACATATAACTATTTTCCTGGCTCAAACTGTGAGCATCAGGAGAACAACTTAAAATATTGTTTCCCCTTCTGCAAATTGGCCATCTAACGATGCTATTTCAGAACTTAAAATATCGTTTTCCCTTCTGCAAATTGGCCATCTAAGGATGTTATTTCTGCTGATTCTGTATGAAACTATTTTGATGTTACAAAATTTTCCGATATTATTTGTTGATATTCCATTAAAATTATTATCGGTAGATATAACTTAATATAATTACATTGGATGGTGGCATGTTATATCCACTAACATATGTTCTCTTGTGCAGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTTTCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGGTGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTATGCATTTGGATAATGAAAGACACTG]
consensusID : consensus_7836#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence 
                              [TTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCATCCATGTTGCAAGGTTAAGCATGGGAACTGTGGTCCTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGATTGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATGCAGTGGCCAAAAAAGATTTGGTTAGTGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTTTCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGGTGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTATGCATTTGGATAATGAAAGACACTGATATAATTTATTTGGATGGNGTTATTCTTACTCATGGTACTTTTGTTTACTTTAAAGGCTGGGATAGAGACTGCAAAGCTCTT]
[+] EMBL CF323529             [TTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCATCCATGTTGCAAGGTTAAGCATGGGAACTGTGGTCCTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGATTGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATGCAGTGGCCAAAAAAGATTTGGTTAGTGCACTAAAGCGTCTACAGAACTCAGGTGCCTCCTATTTTGTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTTTCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGGTGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTATGCATTTGGATAATGAAAGACACTGATATAATTTATTTGGATGGNGTTATTCTTACTCATGGTACTTTTGTTTACTTTAAAGGCTGGGATAGAGACTGCAAAGCTCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7836#0      ACCACTAATCCGAAGCGGCTCCCACGCCCGCCGCCCCGCCGCCACGCCGCCATGCGGCTA 60
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      CTCCCCTACGCGCCGTCGCCGCGGCCGCCGCAGCGCTCGCTCGCCACCCGCAGGACCAAG 120
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      CCAGGGCCGCCGTGCGCGCTCCCCTTCCCCGACGCCCTCCGCGCCGCTGCCGCGGCCACG 180
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      GCGGCCGCCATGTCCATCTCCCTCTCCCTCCTCACCGGCGACGCCGTGGGGGCGGAGCGG 240
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      CCGCGGGGCCCCGAGCTCTGCCGCGACGGGGCCGCCGCCGAGACCAAGGAGGAGGTGAGG 300
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      AGGAGCGAAGTGGTGACGAACGAGCAGCTCGTGGAGGAGGCGTGGGAGGTGGTCAACGAG 360
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      GGGTTCCTCCCGGACGCCGGAAGCCGTCCCTGGTCGCCGGAGATGTGGATGAAAAAGAAG 420
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      CAAGATATTGTCCAAACCTCAATCAGATCCCGTTCCAGAGCCCATGATATCATTCAGAAA 480
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      ATGCTGGCTAACCTGGGTGACCCATACACAAGGTTCCTGACTCCCTCCGAATTCTGATGA 540
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      ------------------------------------------------------------
                                                                                  
consensus_7836#0      TATTTTGCATGTGTTAAATCAATCTGGTGAAGTTCTCCAAGATGTCAAAATATGACATGA 600
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      -----------------------------------------TTCTATGCATAGAACTTAT 19
                                                                                  
consensus_7836#0      CGGGAATAGGATTAAACTTGAGAGAAATTCCTGACGGCAATGGCTCTTCCAAGTTGATGG 660
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      TGCAAATGGCCATGTAGT---ATCTAATTCTTAAGCCAAAACTGCTATGCATGTACATAT 76
                                                                                  
consensus_7836#0      TATTAGGGCTCATATTAGATGGGCCTGCCCACTCTGCTGGTGTTAGACAGGGTGACGAAC 720
consensus_7836#2      ------------------------------------------------------------
consensus_7836#1      AACTA----TTTTCCTGGCTCAAACTGTGAGCATCAGGAGAACAACTTAAAATATTGTTT 132
                                                                                  
consensus_7836#0      TTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCAT---CCA 777
consensus_7836#2      TTTTGTCAGTCAATGGCATTGATGTTATGGGTAAATCTGCATTTGATGTGTCAT---CCA 57
consensus_7836#1      CCCCTTCTGCAAATTGGCCATCTAACGATGCTATTTCAGAACTTAAAATATCGTTTTCCC 192
                           ** *  *** *      *      * **  ** * * ** *  * ** *   ** 
consensus_7836#0      TGTTGCAAGGTCCAAAAGATACTTTTGTTACAATTAAGGTTAAGCATGGGAACTGTGGTC 837
consensus_7836#2      TGTTGCAAGGT-----------------------------TAAGCATGGGAACTGTGGTC 88
consensus_7836#1      TTCTGCAAATTGGCCAT----------------------CTAAGGATGTTATTTCTGCTG 230
                      *  *****  *                             **** ***  *  * ** * 
consensus_7836#0      CTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGAT 897
consensus_7836#2      CTGTTGAGCCATTGAAGGTACAGAGACAACTGGTTGCTCGCACACCAGTTTTCTATCGAT 148
consensus_7836#1      ATTCTGTATGA--AACTATTTTGATGTTACAAAATTTTCCGATATTATTTGTTGATATTC 288
                       *  **    *   *   *   **    **    *  **  * *  * ** *  **    
consensus_7836#0      TGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATG 957
consensus_7836#2      TGGAGAAAAGAGAAAATGAGGATTCAGCTATAGGATATATTCACATTAAAGAATTCAATG 208
consensus_7836#1      CATTAAAATTATTATCGGTAGATATAACTT---AATATAATTACATTGGATGGTGGCATG 345
                           ***  *  *   *  ***  * **     ***** * *****  *   *   ***
consensus_7836#0      CAGTGGCCA--AAAAAGATTTGGTTAGTGCA---CTAAAGCGTCTACAGAACTCAGGTGC 1012
consensus_7836#2      CAGTGGCCA--AAAAAGATTTGGTTAGTGCA---CTAAAGCGTCTACAGAACTCAGGTGC 263
consensus_7836#1      TTATATCCACTAACATATGTTCTCTTGTGCAGCACTAAAGCGTCTACAGAACTCAGGTGC 405
                         *  ***  ** *    **   * *****   **************************
consensus_7836#0      CTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCCAGCTGGG----- 1067
consensus_7836#2      CTCCTATTTTGTTT-GGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTT 322
consensus_7836#1      CTCCTATTTTGTTTTGGATTTGAGGGACAATCTTGGTGGACTAGTCCAAGTATGCTTTTT 465
                      ************** ******************************** **   *      
consensus_7836#0      --ATAGAGACTGCAAAGCTCT-----TCCTGAAGTAAGGAGACACGGTGATTTATACTGC 1120
consensus_7836#2      TCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGG 382
consensus_7836#1      TCATTTCAATTATATAACCATGTCAGTCTTTGGTCTGCTAAACAAAATTGTGTTTGTGGG 525
                        **    * *  * * *  *     ** *         * ***   *  * * *   * 
consensus_7836#0      TGG--------------------------------------------------------- 1123
consensus_7836#2      TGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTAT 442
consensus_7836#1      TGCCATTCTTTTCCTTTGAAGTTCTTGAGTTGTAAGCTTCTTGAAACAGTTGAGGCTTAT 585
                      **                                                          
consensus_7836#0      ------------------------------------------------------------
consensus_7836#2      GCATTTGGATAATGAAAGACACTGATATAATTTATTTGGATGGNGTTATTCTTACTCATG 502
consensus_7836#1      GCATTTGGATAATGAAAGACACTG------------------------------------ 609
                                                                                  
consensus_7836#0      -----------------------------------------------
consensus_7836#2      GTACTTTTGTTTACTTTAAAGGCTGGGATAGAGACTGCAAAGCTCTT 549
consensus_7836#1      -----------------------------------------------
                                                                     
 | 
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||