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Oryza sativa
cluster # 7845 cluster # 7845       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7845#0 length = 2518 sequences # 4  
consensus_7845#1 length = 619 sequences # 1  

consensusID : consensus_7845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2518
fasta sequence
                              [TCCGACCGAGTCGCTCACGTCTCTCTCTCGCCCTTGCTCTCTCGCCTCTCTCTCTCGCCTCCCTCTATCCCTCTCTCTCTCTCTCTCTCGGCGGCCCGGCGGTGGCCCGTCGAGGTAGGCGTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTGGTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCTCCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGGCTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCCTCCGCTAGATCTGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTATTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAACTGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGTTTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGACAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAACTTTTGCCCACTCTTAAAAAAAGATATTAAAGAAAGTTCCAAATGCATGCAGATGCGACCGGAATGCTTTTGAATTGGAACAGGGACCTTACTGGAAAAGGTGACTCACACGGCCGGACACCTCTCCATTTTGCTGTATCGATAGAACCACCCACGAAGATTCCATATTACCACAAGATATTGTTCTCCATCATGCGCCACATAGACATATACACTCTTTGTTTGGACCGGTTCCTCTATCCTAGGAAAACCAGGGGAGATAGCTTGACTCTGACTGGTATGTTGATGGATGCTGATGAATCCTCAGCGTATCAGCCTGACGACAAGGGTTCTTTCCCCATCCATGTCGCTGCAGCAGAGGGTAATGATGGCACGATCAACATACTGCTCAATAAGAGCCCCAATTGTGCCACCTTGCGCAATGCCCAGGGAAGAACATTTCTGCATATTGCTGTTGAGAACGGAAGACACACAATCATAATGTTTGTTCGCAGGAGAAGAAGGCTGGCAGCTAAAATTATGAATTTGCAGGACAACGATGGAAACACCGCCCTACACTTGGCTATACAAGATGGGGATCTGCATGCTGTTTTATGTCTATTGATGAACCCAGTAGTAAAAGTTGATTGTCTGAACAAGGAGGGTCTAACACCTCTAGATATATCAAGGAAGCTGATACCAGAAGGGCTTCTTCATGGATCGCATCAACGAATTTGGATAAAGAGGTCACTACATCTTGCGAATGCACATCATGCTAACCCTTCCCTTGACCATCGTCAAGAGAAGTGCATTTGCCGAACGGTCCGTGAGGAAAGAGATTCTAAAATAGTTGAAAAAGATGACGATGAACAAGAAGATTCAAAGACAATTACGGAGTCTACACAAGTTATGGCCGTCTGCTCCACACTCATTGCAACTGTGGCATTCGCAGCAGCTTTTACATTGCCTGGAGGTTATAGAGCAGATGATCACACCAATGGCGGCACGCCGACATTCGTCGGAAGCTACGGTTTCGATGCATTCGTCTTGGCCATCACATTTGCATTCGTCTACTCCTTGTTGGCTACATTTAGCCTCGTGTATTCAGGAATGACCAAAGTTGACTACAGCATCCGCTTGGAGCACCTTAACTCGGCCAATAGCTTGGTCTGGCTATCAATCAGGTGCTTGCTAGCTGCATTTGCATTAGGTTTATACGTTGTCCTGGCACCAGTTGCTCACAAGACTGCCTTGCTTATCTGCCTCATGTGTTCCGTTGGGTTATTGCACGGGCATACGTCAATGAAGACACAGATCCGCATGGCCGTGCTCTTACAGGGAAGGATTGGGTTTAAGGTGTGGTGGATTTTGGGCAGGAAGATACTTCGAAACTTTCTGCACTCATTTTGGCCCTTCCTGATTATCTTTGGTTGGCCAGCTTATCTGAAATGGAGGCACCAACAGTAGTTAGACTCATATATATGACCACCAAATATGTCGTATTTGTACCGCTGATCACCATAGATTGTATTTCTTATAGTATCCCTTTTGCTATTGTGATTTTGTTTCTATGGTGACAACATACTGTATTGTGTACCGTTCTGGGAAAACTATTGTATTTTTGCCACATCAAAAAAAAGA]

[+] EMBL AK109223             [TCCGACCGAGTCGCTCACGTCTCTCTCTCGCCCTTGCTCTCTCGCCTCTCTCTCTCGCCTCCCTCTATCCCTCTCTCTCTCTCTCTCTCGGCGGCCCGGCGGTGGCCCGTCGAGGTAGGCGTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTGGTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCTCCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGGCTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCCTCCGCTAGATCTGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK073765             [                                                                          CTCTCTCTCTCTCTCGGCGGCCCGGCGGTGGCCCGTCGAGGTAGGCGTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTGGTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCTCCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGGCTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCCTCCGCTAGATCTGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTATTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAACTGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGTTTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGACAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAACTTTTGCCCACTCTTAAAAAAAGATATTAAAGAAAGTTCCAAATGCATGCAGATGCGACCGGAATGCTTTTGAATTGGAACAGGGACCTTACTGGAAAAGGTGACTCACACGGCCGGACACCTCTCCATTTTGCTGTATCGATAGAACCACCCACGAAGATTCCATATTACCACAAGATATTGTTCTCCATCATGCGCCACATAGACATATACACTCTTTGTTTGGACCGGTTCCTCTATCCTAGGAAAACCAGGGGAGATAGCTTGACTCTGACTGGTATGTTGATGGATGCTGATGAATCCTCAGCGTATCAGCCTGACGACAAGGGTTCTTTCCCCATCCATGTCGCTGCAGCAGAGGGTAATGATGGCACGATCAACATACTGCTCAATAAGAGCCCCAATTGTGCCACCTTGCGCAATGCCCAGGGAAGAACATTTCTGCATATTGCTGTTGAGAACGGAAGACACACAATCATAATGTTTGTTCGCAGGAGAAGAAGGCTGGCAGCTAAAATTATGAATTTGCAGGACAACGATGGAAACACCGCCCTACACTTGGCTATACAAGATGGGGATCTGCATGCTGTTTTATGTCTATTGATGAACCCAGTAGTAAAAGTTGATTGTCTGAACAAGGAGGGTCTAACACCTCTAGATATATCAAGGAAGCTGATACCAGAAGGGCTTCTTCATGGATCGCATCAACGAATTTGGATAAAGAGGTCACTACATCTTGCGAATGCACATCATGCTAACCCTTCCCTTGACCATCGTCAAGAGAAGTGCATTTGCCGAACGGTCCGTGAGGAAAGAGATTCTAAAATAGTTGAAAAAGATGACGATGAACAAGAAGATTCAAAGACAATTACGGAGTCTACACAAGTTATGGCCGTCTGCTCCACACTCATTGCAACTGTGGCATTCGCAGCAGCTTTTACATTGCCTGGAGGTTATAGAGCAGATGATCACACCAATGGCGGCACGCCGACATTCGTCGGAAGCTACGGTTTCGATGCATTCGTCTTGGCCATCACATTTGCATTCGTCTACTCCTTGTTGGCTACATTTAGCCTCGTGTATTCAGGAATGACCAAAGTTGACTACAGCATCCGCTTGGAGCACCTTAACTCGGCCAATAGCTTGGTCTGGCTATCAATCAGGTGCTTGCTAGCTGCATTTGCATTAGGTTTATACGTTGTCCTGGCACCAGTTGCTCACAAGACTGCCTTGCTTATCTGCCTCATGTGTTCCGTTGGGTTATTGCACGGGCATACGTCAATGAAGACACAGATCCGCATGGCCGTGCTCTTACAGGGAAGGATTGGGTTTAAGGTGTGGTGGATTTTGGGCAGGAAGATACTTCGAAACTTTCTGCACTCATTTTGGCCCTTCCTGATTATCTTTGGTTGGCCAGCTTATCTGAAATGGAGGCACCAACAGTAGTTAGACTCATATATATGACCACCAAATATGTCGTATTTGTACCGCTGATCACCATAGATTGTATTTCTTATAGTAT                                                                                                  ]
[+] EMBL CB645169             [                                                                                             GCCCGGCGGTGGCCCGTCGAGGTAGGCGTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTGGTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCTCCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGGCTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCCTCCGCTAGATCTGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB645170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAAGATGACGATGAACAAGAAGATTCAAAGACAATTACGGAGTCTACACAAGTTATGGCCGTCTGCTCCACACTCATTGCAACTGTGGCATTCGCAGCAGCTTTTACATTGCCTGGAGGTTATAGAGCAGATGATCACACCAATGGCGGCACGCCGACATTCGTCGGAAGCTACGGTTTCGATGCATTCGTCTTGGCCATCACATTTGCATTCGTCTACTCCTTGTTGGCTACATTTAGCCTCGTGTATTCAGGAATGACCAAAGTTGACTACAGCATCCGCTTGGAGCACCTTAACTCGGCCAATAGCTTGGTCTGGCTATCAATCAGGTGCTTGCTAGCTGCATTTGCATTAGGTTTATACGTTGTCCTGGCACCAGTTGCTCACAAGACTGCCTTGCTTATCTGCCTCATGTGTTCCGTTGGGTTATTGCACGGGCATACGTCAATGAAGACACAGATCCGCATGGCCGTGCTCTTACAGGGAAGGATTGGGTTTAAGGTGTGGTGGATTTTGGGCAGGAAGATACTTCGAAACTTTCTGCACTCATTTTGGCCCTTCCTGATTATCTTTGGTTGGCCAGCTTATCTGAAATGGAGGCACCAACAGTAGTTAGACTCATATATATGACCACCAAATATGTCGTATTTGTACCGCTGATCACCATAGATTGTATTTCTTATAGTATCCCTTTTGCTATTGTGATTTTGTTTCTATGGTGACAACATACTGTATTGTGTACCGTTCTGGGAAAACTATTGTATTTTTGCCACATCAAAAAAAAGA]


>consensus_7845#0 TCCGACCGAGTCGCTCACGTCTCTCTCTCGCCCTTGCTCTCTCGCCTCTCTCTCTCGCCT CCCTCTATCCCTCTCTCTCTCTCTCTCTCGGCGGCCCGGCGGTGGCCCGTCGAGGTAGGC GTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTG GTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCT CCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGG CTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCCTCCGCTAGATC TGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGGT GGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTG TGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTT GTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGC TCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTAT TTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAACT GGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGTT TGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGAC AAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAACT TTTGCCCACTCTTAAAAAAAGATATTAAAGAAAGTTCCAAATGCATGCAGATGCGACCGG AATGCTTTTGAATTGGAACAGGGACCTTACTGGAAAAGGTGACTCACACGGCCGGACACC TCTCCATTTTGCTGTATCGATAGAACCACCCACGAAGATTCCATATTACCACAAGATATT GTTCTCCATCATGCGCCACATAGACATATACACTCTTTGTTTGGACCGGTTCCTCTATCC TAGGAAAACCAGGGGAGATAGCTTGACTCTGACTGGTATGTTGATGGATGCTGATGAATC CTCAGCGTATCAGCCTGACGACAAGGGTTCTTTCCCCATCCATGTCGCTGCAGCAGAGGG TAATGATGGCACGATCAACATACTGCTCAATAAGAGCCCCAATTGTGCCACCTTGCGCAA TGCCCAGGGAAGAACATTTCTGCATATTGCTGTTGAGAACGGAAGACACACAATCATAAT GTTTGTTCGCAGGAGAAGAAGGCTGGCAGCTAAAATTATGAATTTGCAGGACAACGATGG AAACACCGCCCTACACTTGGCTATACAAGATGGGGATCTGCATGCTGTTTTATGTCTATT GATGAACCCAGTAGTAAAAGTTGATTGTCTGAACAAGGAGGGTCTAACACCTCTAGATAT ATCAAGGAAGCTGATACCAGAAGGGCTTCTTCATGGATCGCATCAACGAATTTGGATAAA GAGGTCACTACATCTTGCGAATGCACATCATGCTAACCCTTCCCTTGACCATCGTCAAGA GAAGTGCATTTGCCGAACGGTCCGTGAGGAAAGAGATTCTAAAATAGTTGAAAAAGATGA CGATGAACAAGAAGATTCAAAGACAATTACGGAGTCTACACAAGTTATGGCCGTCTGCTC CACACTCATTGCAACTGTGGCATTCGCAGCAGCTTTTACATTGCCTGGAGGTTATAGAGC AGATGATCACACCAATGGCGGCACGCCGACATTCGTCGGAAGCTACGGTTTCGATGCATT CGTCTTGGCCATCACATTTGCATTCGTCTACTCCTTGTTGGCTACATTTAGCCTCGTGTA TTCAGGAATGACCAAAGTTGACTACAGCATCCGCTTGGAGCACCTTAACTCGGCCAATAG CTTGGTCTGGCTATCAATCAGGTGCTTGCTAGCTGCATTTGCATTAGGTTTATACGTTGT CCTGGCACCAGTTGCTCACAAGACTGCCTTGCTTATCTGCCTCATGTGTTCCGTTGGGTT ATTGCACGGGCATACGTCAATGAAGACACAGATCCGCATGGCCGTGCTCTTACAGGGAAG GATTGGGTTTAAGGTGTGGTGGATTTTGGGCAGGAAGATACTTCGAAACTTTCTGCACTC ATTTTGGCCCTTCCTGATTATCTTTGGTTGGCCAGCTTATCTGAAATGGAGGCACCAACA GTAGTTAGACTCATATATATGACCACCAAATATGTCGTATTTGTACCGCTGATCACCATA GATTGTATTTCTTATAGTATCCCTTTTGCTATTGTGATTTTGTTTCTATGGTGACAACAT ACTGTATTGTGTACCGTTCTGGGAAAACTATTGTATTTTTGCCACATCAAAAAAAAGA



consensusID : consensus_7845#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence
                              [CGGCGGCCGTGCCCTCCCCCTCCCTTAAATCTGGACGAGGGGGAGTTGGTGNACGTCGGGACCGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCACCGGCCCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTATTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAACTGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGTTTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGACAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAACTTTTGCCCCCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTCGC]

[-] EMBL CA754445             [CGGCGGCCGTGCCCTCCCCCTCCCTTAAATCTGGACGAGGGGGAGTTGGTGNACGTCGGGACCGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCACCGGCCCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTATTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAACTGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGTTTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGACAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAACTTTTGCCCCCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTCGC]


>consensus_7845#1 CGGCGGCCGTGCCCTCCCCCTCCCTTAAATCTGGACGAGGGGGAGTTGGTGNACGTCGGG ACCGGTCGGGCGGCGGTCCAGCGAAGGCGGTGGCGCCACCGGCCCCCGATGGATTTGTTG GATGATTTTATAGTTCTTTTAGATTTTTTTGTGATTTGTGGATGATTTTATTTCTGAATA TGTTTCATCTGTGATCTGTGATATGTGATTTGTGATTCGTGATTTGTGGGGGTTTGGGGA TGGAGTAGTGACGATGATTGTGAGTTCCGGCTCGATTCGAGTCGGCTCTTTTTTTTTTTG GCTCGTGCAAACTTATAGGTGCCGGTTCTATTTTGGTATAGGGGTCGGTTGTTTTTATTG GTGCCGACCAATAGGTGCCGGTTGGAAAACTGGCACCTATAGCCGGTTCCCAAGCGGCAC CTATGATGGTATTTTACTAGTGTCAGGTGTTTGGAATTTTCGAAGATATCACTTAGGGTC TTTTTTTTTTTTCTGGGCATGTGGTTTTGACAAGCCCTATACATATCTTTGTATAATTTT CTCCTATTATATCAATATAGGAGGCACAACTTTTGCCCCCTCTTAAAAAAAAAAAAAAAA AAAAAAAAAAAAANCTCGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7845#0      TCCGACCGAGTCGCTCACGTCTCTCTCTCGCCCTTGCTCTCTCGCCTCTCTCTCTCGCCT 60
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CCCTCTATCCCTCTCTCTCTCTCTCTCTCGGCGGCCCGGCGGTGGCCCGTCGAGGTAGGC 120
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GTGGCGGTGGCTGGCAACGGCGCGCCCTCCCCTCCGCCGGATCTAGCTGGAGGGGAGGTG 180
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GTGGACCTTGGGGACGGCCGGGCGGTGGTCCGGTGGAGGCGGTTGCGGCGGCCGCGCCCT 240
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CCCCTCCGCCAAATCCGGCCGGAGAGGAGGCAGCGGACCTCGGCGGAGGCGGCACAGCGG 300
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CTGGCGGCGGACCTCGGCGGAGGCGGCTGGCGGCGGCCGTGCCCTCCCC-TCCGCTAGAT 359
consensus_7845#1      ------------------------------CGGCGGCCGTGCCCTCCCCCTCCCTTAAAT 30
                                                    ******************* ***  ** **

consensus_7845#0      CTGGACGGAGGGGAGGTGGTGGACGTCGGGGACGGTCGGGCGGCGGTCCAGCGAAGGCGG 419
consensus_7845#1      CTGGACGAGGGGGAGTTGGTGNACGTCGGGACCGGTCGGGCGGCGGTCCAGCGAAGGCGG 90
                      *******  ****** ***** ********  ****************************

consensus_7845#0      TGGCGCCAGCGGCGCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTT 479
consensus_7845#1      TGGCGCCACCGGCCCCCGATGGATTTGTTGGATGATTTTATAGTTCTTTTAGATTTTTTT 150
                      ******** **** **********************************************

consensus_7845#0      GTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATT 539
consensus_7845#1      GTGATTTGTGGATGATTTTATTTCTGAATATGTTTCATCTGTGATCTGTGATATGTGATT 210
                      ************************************************************

consensus_7845#0      TGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGG 599
consensus_7845#1      TGTGATTCGTGATTTGTGGGGGTTTGGGGATGGAGTAGTGACGATGATTGTGAGTTCCGG 270
                      ************************************************************

consensus_7845#0      CTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTA 659
consensus_7845#1      CTCGATTCGAGTCGGCTCTTTTTTTTTTTGGCTCGTGCAAACTTATAGGTGCCGGTTCTA 330
                      ************************************************************

consensus_7845#0      TTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAAC 719
consensus_7845#1      TTTTGGTATAGGGGTCGGTTGTTTTTATTGGTGCCGACCAATAGGTGCCGGTTGGAAAAC 390
                      ************************************************************

consensus_7845#0      TGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGT 779
consensus_7845#1      TGGCACCTATAGCCGGTTCCCAAGCGGCACCTATGATGGTATTTTACTAGTGTCAGGTGT 450
                      ************************************************************

consensus_7845#0      TTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGA 839
consensus_7845#1      TTGGAATTTTCGAAGATATCACTTAGGGTCTTTTTTTTTTTTCTGGGCATGTGGTTTTGA 510
                      ************************************************************

consensus_7845#0      CAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAAC 899
consensus_7845#1      CAAGCCCTATACATATCTTTGTATAATTTTCTCCTATTATATCAATATAGGAGGCACAAC 570
                      ************************************************************

consensus_7845#0      TTTTGCCCACTCTTAAAAAAAGATATTAAAGAAAGTTCCAAATGCATGCAGATGCGACCG 959
consensus_7845#1      TTTTGCCCCCTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTCGC----------- 619
                      ******** ************ * *  *** ***     ***  *  **           

consensus_7845#0      GAATGCTTTTGAATTGGAACAGGGACCTTACTGGAAAAGGTGACTCACACGGCCGGACAC 1019
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CTCTCCATTTTGCTGTATCGATAGAACCACCCACGAAGATTCCATATTACCACAAGATAT 1079
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TGTTCTCCATCATGCGCCACATAGACATATACACTCTTTGTTTGGACCGGTTCCTCTATC 1139
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CTAGGAAAACCAGGGGAGATAGCTTGACTCTGACTGGTATGTTGATGGATGCTGATGAAT 1199
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CCTCAGCGTATCAGCCTGACGACAAGGGTTCTTTCCCCATCCATGTCGCTGCAGCAGAGG 1259
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GTAATGATGGCACGATCAACATACTGCTCAATAAGAGCCCCAATTGTGCCACCTTGCGCA 1319
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      ATGCCCAGGGAAGAACATTTCTGCATATTGCTGTTGAGAACGGAAGACACACAATCATAA 1379
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TGTTTGTTCGCAGGAGAAGAAGGCTGGCAGCTAAAATTATGAATTTGCAGGACAACGATG 1439
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GAAACACCGCCCTACACTTGGCTATACAAGATGGGGATCTGCATGCTGTTTTATGTCTAT 1499
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TGATGAACCCAGTAGTAAAAGTTGATTGTCTGAACAAGGAGGGTCTAACACCTCTAGATA 1559
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TATCAAGGAAGCTGATACCAGAAGGGCTTCTTCATGGATCGCATCAACGAATTTGGATAA 1619
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      AGAGGTCACTACATCTTGCGAATGCACATCATGCTAACCCTTCCCTTGACCATCGTCAAG 1679
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      AGAAGTGCATTTGCCGAACGGTCCGTGAGGAAAGAGATTCTAAAATAGTTGAAAAAGATG 1739
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      ACGATGAACAAGAAGATTCAAAGACAATTACGGAGTCTACACAAGTTATGGCCGTCTGCT 1799
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CCACACTCATTGCAACTGTGGCATTCGCAGCAGCTTTTACATTGCCTGGAGGTTATAGAG 1859
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CAGATGATCACACCAATGGCGGCACGCCGACATTCGTCGGAAGCTACGGTTTCGATGCAT 1919
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TCGTCTTGGCCATCACATTTGCATTCGTCTACTCCTTGTTGGCTACATTTAGCCTCGTGT 1979
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      ATTCAGGAATGACCAAAGTTGACTACAGCATCCGCTTGGAGCACCTTAACTCGGCCAATA 2039
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GCTTGGTCTGGCTATCAATCAGGTGCTTGCTAGCTGCATTTGCATTAGGTTTATACGTTG 2099
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TCCTGGCACCAGTTGCTCACAAGACTGCCTTGCTTATCTGCCTCATGTGTTCCGTTGGGT 2159
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TATTGCACGGGCATACGTCAATGAAGACACAGATCCGCATGGCCGTGCTCTTACAGGGAA 2219
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      GGATTGGGTTTAAGGTGTGGTGGATTTTGGGCAGGAAGATACTTCGAAACTTTCTGCACT 2279
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      CATTTTGGCCCTTCCTGATTATCTTTGGTTGGCCAGCTTATCTGAAATGGAGGCACCAAC 2339
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      AGTAGTTAGACTCATATATATGACCACCAAATATGTCGTATTTGTACCGCTGATCACCAT 2399
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      AGATTGTATTTCTTATAGTATCCCTTTTGCTATTGTGATTTTGTTTCTATGGTGACAACA 2459
consensus_7845#1      ------------------------------------------------------------
                                                                                  

consensus_7845#0      TACTGTATTGTGTACCGTTCTGGGAAAACTATTGTATTTTTGCCACATCAAAAAAAAGA 2518
consensus_7845#1      -----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)