cluster # 7859

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Oryza sativa
cluster # 7859 cluster # 7859 Sequences # 5 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7859#0 length = 2650 sequences # 3

consensus_7859#1 length = 918 sequences # 1
consensus_7859#2 length = 601 sequences # 1

consensusID : consensus_7859#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2650
fasta sequence

                              [CAACCCAACCTCAACCTCAACCTCAAGCTCTCCTCCTCCTTCCTCCTCTGCTCCTGCTCCTGCTCCTGCTGCTGCCGTGTGCTCTGCTGGCTGCTCCTGCTGGTGAGGTGGTGGTCTCTCTCCCCCCACTTCACCATCTCCTCCTCTCCTTCGCCGCCGGCGCGCTTGCTTCCTCCTCAGCACGCCACCTCCTCGCCCCTCCTCATAGCTCAATCAGATTACTCGACCGTGCAAACATCCTGACCATTTTCTACAGCCCCGCGCTTTAGCGTTCTTG--TTTTTTTTTTTTTGGCTGCTGCTGATTTGGTGGCGGCGGCTATCTTGGAGAGAGATACAGAATCCGTGCTTCTTCTTGAGCGAGCTGGTTGGTTGGTGGCATGAGGCGTGGAGAGCTTCAGAGTGAGTGCCATGGCGCGTGTTGATTGCTGTTGGTGGTGAGATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATCGGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGGTAAGAATATACTATTATTATATTGCGCCTACTTATTTTGAAGCCTCACCCGGAGGCAAAATGCTGACCTGAATATATATTATTTTAATTGATCCAATATTTTTCTTAGGCTCTGTTTTTTTTGAAAGGAATACTACCAGGCAATGGCCCAGTAGTGTATTTTATAGAAGCCAACAAAGTTTTTACAGGGAAAAAAAGAAAAAATACAAAAGGCTACAACCCCCTATAGAAGCTATAAAGTTTGTAACCAATTAGAAACCAATTGTCTAAGATCATCATTCATCCTACACATATGTAGAAGAATTTCATGCTTAAAAGAATTCCACCAGCTGTCAAATGAAGGATCTATATTCTGGAAAATCTTTCCATTCCTTTGCTTCCAAATGTGCCAACACGCAATGAAATAAATCTCCAAGAATCCTTTTTTCTGAAATCTCAATCTTGCTAGCACCAGCATCCTTTTTTCTGAAAGAATTCTAGAGAAGTGTTCCAAGATATTCCCAGCTTCTGCCAACATTTTCTACTAAAAGGGCATTGAAAGAACAGGTGAGACAAAGTTTCTCTGTCATGCAAAGGGCATAAGACACAAGTAAGATCAGCATTTAGGGGGGCGTATTTTCTCCTGTCCAACATGTCTCTCGTGTTCAGCCTATCAGAGAAAAGAAGCCATATGAAAACTTTTATCTTCATCACACATTTGCTCTTCCAGATCCATCGGAAAGGTCTGGGAGGTTGCGTGGATGCAAAATTCAACTTGTAAAAAGCTTTTGAGGTGTAATTGTTCCTGCCCCATATAAAACTCCAATTATCCCCCTGCTGACTTGCTAAGGACAGAGCATCCAGCTCTCCCTTTAGCAGCAGAAATTCTGTGTAAGCTTCCTGGGTCAGTGGCAACTTAAAACAATCCTCAAAAGGTTTAGCACAGGTGACAGCCAAGGAATCATTTCTGGCAATGGCATGGCCACATAGATGTGGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATG]

[+] EMBL AK069158             [CAACCCAACCTCAACCTCAACCTCAAGCTCTCCTCCTCCTTCCTCCTCTGCTCCTGCTCCTGCTCCTGCTGCTGCCGTGTGCTCTGCTGGCTGCTCCTGCTGGTGAGGTGGTGGTCTCTCTCCCCCCACTTCACCATCTCCTCCTCTCCTTCGCCGCCGGCGCGCTTGCTTCCTCCTCAGCACGCCACCTCCTCGCCCCTCCTCATAGCTCAATCAGATTACTCGACCGTGCAAACATCCTGACCATTTTCTACAGCCCCGCGCTTTAGCGTTCTTG  TTTTTTTTTTTTTGGCTGCTGCTGATTTGGTGGCGGCGGCTATCTTGGAGAGAGATACAGAATCCGTGCTTCTTCTTGAGCGAGCTGGTTGGTTGGTGGCATGAGGCGTGGAGAGCTTCAGAGTGAGTGCCATGGCGCGTGTTGATTGCTGTTGGTGGTGAGATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATCGGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGGTAAGAATATACTATTATTATATTGCGCCTACTTATTTTGAAGCCTCACCCGGAGGCAAAATGCTGACCTGAATATATATTATTTTAATTGATCCAATATTTTTCTTAGGCTCTGTTTTTTTTGAAAGGAATACTACCAGGCAATGGCCCAGTAGTGTATTTTATAGAAGCCAACAAAGTTTTTACAGGGAAAAAAAGAAAAAATACAAAAGGCTACAACCCCCTATAGAAGCTATAAAGTTTGTAACCAATTAGAAACCAATTGTCTAAGATCATCATTCATCCTACACATATGTAGAAGAATTTCATGCTTAAAAGAATTCCACCAGCTGTCAAATGAAGGATCTATATTCTGGAAAATCTTTCCATTCCTTTGCTTCCAAATGTGCCAACACGCAATGAAATAAATCTCCAAGAATCCTTTTTTCTGAAATCTCAATCTTGCTAGCACCAGCATCCTTTTTTCTGAAAGAATTCTAGAGAAGTGTTCCAAGATATTCCCAGCTTCTGCCAACATTTTCTACTAAAAGGGCATTGAAAGAACAGGTGAGACAAAGTTTCTCTGTCATGCAAAGGGCATAAGACACAAGTAAGATCAGCATTTAGGGGGGCGTATTTTCTCCTGTCCAACATGTCTCTCGTGTTCAGCCTATCAGAGAAAAGAAGCCATATGAAAACTTTTATCTTCATCACACATTTGCTCTTCCAGATCCATCGGAAAGGTCTGGGAGGTTGCGTGGATGCAAAATTCAACTTGTAAAAAGCTTTTGAGGTGTAATTGTTCCTGCCCCATATAAAACTCCAATTATCCCCCTGCTGACTTGCTAAGGACAGAGCATCCAGCTCTCCCTTTAGCAGCAGAAATTCTGTGTAAGCTTCCTGGGTCAGTGGCAACTTAAAACAATCCTCAAAAGGTTTAGCACAGGTGACAGCCAAGGAATCATTTCTGGCAATGGCATGGCCACATAGATGTGGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATG]
[+] EMBL CA756331             [                                                      TGCTCCTGCTCCTGCTGCTGCCGTGTGCTCTGCTGGCTGCTCCTGCTGGTGAGGTGGTGGTCTCTCTCCCCCCACTTCACCATCTCCTCCTCTCCTTCGCCGCCGGCGCGCTTGCTTCCTCCTCAGCACGCCACCTCCTCGCCCCTCCTCATAGCTCAATCAGATTACTCGACCGTGCAAACATCCTGACCATTTTCTACAGCCCCGCGCTTTAGCGTTCTTGTTTTTTTTTTTTTTTGGCTGCTGCTGATTTGGTGGCGGCGGCTATCTTGGAGAGAGATACAGAATCCGTGCTTCTTCTTGAGCGAGCTGGTTGGTTGGTGGCATGAGGCGTGGAGAGCTTCAGAGTGAGTGCCATGGCGCGTGTTGATTGCTGTTGGTGGTGAGATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATCGGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATCCATACGAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATT CGAATAG AGATCTCGCTAATCTCAGTACAAATGGTTTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF322658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGCCATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGCGCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_7859#0
CAACCCAACCTCAACCTCAACCTCAAGCTCTCCTCCTCCTTCCTCCTCTGCTCCTGCTCC
TGCTCCTGCTGCTGCCGTGTGCTCTGCTGGCTGCTCCTGCTGGTGAGGTGGTGGTCTCTC
TCCCCCCACTTCACCATCTCCTCCTCTCCTTCGCCGCCGGCGCGCTTGCTTCCTCCTCAG
CACGCCACCTCCTCGCCCCTCCTCATAGCTCAATCAGATTACTCGACCGTGCAAACATCC
TGACCATTTTCTACAGCCCCGCGCTTTAGCGTTCTTGTTTTTTTTTTTTTGGCTGCTGCT
GATTTGGTGGCGGCGGCTATCTTGGAGAGAGATACAGAATCCGTGCTTCTTCTTGAGCGA
GCTGGTTGGTTGGTGGCATGAGGCGTGGAGAGCTTCAGAGTGAGTGCCATGGCGCGTGTT
GATTGCTGTTGGTGGTGAGATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATC
GGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGC
CATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGC
GCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAA
TCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAA
GTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGAC
ACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGA
GAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCC
AGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTC
TGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCA
AAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGA
GAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGG
CATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGC
ATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAG
GGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTAT
GGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCA
TGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTT
CCGATCATCTGAGCTTCTTAAGGTAAGAATATACTATTATTATATTGCGCCTACTTATTT
TGAAGCCTCACCCGGAGGCAAAATGCTGACCTGAATATATATTATTTTAATTGATCCAAT
ATTTTTCTTAGGCTCTGTTTTTTTTGAAAGGAATACTACCAGGCAATGGCCCAGTAGTGT
ATTTTATAGAAGCCAACAAAGTTTTTACAGGGAAAAAAAGAAAAAATACAAAAGGCTACA
ACCCCCTATAGAAGCTATAAAGTTTGTAACCAATTAGAAACCAATTGTCTAAGATCATCA
TTCATCCTACACATATGTAGAAGAATTTCATGCTTAAAAGAATTCCACCAGCTGTCAAAT
GAAGGATCTATATTCTGGAAAATCTTTCCATTCCTTTGCTTCCAAATGTGCCAACACGCA
ATGAAATAAATCTCCAAGAATCCTTTTTTCTGAAATCTCAATCTTGCTAGCACCAGCATC
CTTTTTTCTGAAAGAATTCTAGAGAAGTGTTCCAAGATATTCCCAGCTTCTGCCAACATT
TTCTACTAAAAGGGCATTGAAAGAACAGGTGAGACAAAGTTTCTCTGTCATGCAAAGGGC
ATAAGACACAAGTAAGATCAGCATTTAGGGGGGCGTATTTTCTCCTGTCCAACATGTCTC
TCGTGTTCAGCCTATCAGAGAAAAGAAGCCATATGAAAACTTTTATCTTCATCACACATT
TGCTCTTCCAGATCCATCGGAAAGGTCTGGGAGGTTGCGTGGATGCAAAATTCAACTTGT
AAAAAGCTTTTGAGGTGTAATTGTTCCTGCCCCATATAAAACTCCAATTATCCCCCTGCT
GACTTGCTAAGGACAGAGCATCCAGCTCTCCCTTTAGCAGCAGAAATTCTGTGTAAGCTT
CCTGGGTCAGTGGCAACTTAAAACAATCCTCAAAAGGTTTAGCACAGGTGACAGCCAAGG
AATCATTTCTGGCAATGGCATGGCCACATAGATGTGGTTACTGGCAGGGCAATTAGAGCC
TCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGA
AGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATC
AGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGC
AATGGCTATG

consensusID : consensus_7859#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 918
fasta sequence

                              [AGGTCAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTGGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATGGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATG]

[+] EMBL AB051297             [AGGTCAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTGGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATGGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGTTACTGGCAGGGCAATTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATGGCAATGGCTATG]




>consensus_7859#1
AGGTCAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTGGGTA
ACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATGGCTGATACAAGTCCA
AGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGTTTGAACAAGGA
CAGTTAGCTGCTCCCACTGCTTCTGATTCTAGTGACAGGTCAAAGGACAAACTAGATCAT
AAGACACTTCGCCGCCTTGCCCAAAATCGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAG
AAGGCATATATCCAAAACCTTGAGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAG
CTTCAGCGGGCTCGTCAACAGGGCATTTTTATATCAACATCGAGTGATCAGTCCCACTCA
GCGAGTGGAAATGGAGCTTTGGCATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCAT
AACAAACATATAAATGAGTTGAGGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTC
AAAAGTACAGTTGATAGTATTATGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTG
GCAGCCAAAGCAGACGTTTTTCATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGG
TGCTTCATGTGGCTAGGTGGCTTCCGATCATCTGAGCTTCTTAAGTTACTGGCAGGGCAA
TTAGAGCCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAA
CAGGCTGAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACC
CTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGA
CAAATGGCAATGGCTATG

consensusID : consensus_7859#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence

                              [CAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGGTATGCAGGCCATGAACGGATAATTCCTCATGACAGATCTGATGGTCTTTTATAAAGTAAAATTCCACCCACACCAGGAATTCATGCAGTTTTCCCTCCTGGTTGCAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGGTAATAAGACGCCTATCATTTTGAAATTACTGTTTATCATGATGATATGAATTTGTTTAAAACTGTTCATACCAGGTTTGGGATGTTTGAATTTTCTTTCAAATACCTTTGTAAAGAATTGCCTGAATTTGTGATAGGTACAGCCTTTATAATTCTACTATTATATGCATGTGGCGATTGATTTTTTATGTGTTAAGGACTGATGGTTCATAACTTCATATGTGC]

[+] EMBL CF306723             [CAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAAGGTATGCAGGCCATGAACGGATAATTCCTCATGACAGATCTGATGGTCTTTTATAAAGTAAAATTCCACCCACACCAGGAATTCATGCAGTTTTCCCTCCTGGTTGCAGTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGATGAGAGGAATCAGATGGTAATAAGACGCCTATCATTTTGAAATTACTGTTTATCATGATGATATGAATTTGTTTAAAACTGTTCATACCAGGTTTGGGATGTTTGAATTTTCTTTCAAATACCTTTGTAAAGAATTGCCTGAATTTGTGATAGGTACAGCCTTTATAATTCTACTATTATATGCATGTGGCGATTGATTTTTTATGTGTTAAGGACTGATGGTTCATAACTTCATATGTGC]




>consensus_7859#2
CAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGT
AAAGGTATGCAGGCCATGAACGGATAATTCCTCATGACAGATCTGATGGTCTTTTATAAA
GTAAAATTCCACCCACACCAGGAATTCATGCAGTTTTCCCTCCTGGTTGCAGTCTATTTC
TCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGACACTGGTCCC
ACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGAGAATTGGGG
GGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCCAGACACTGA
TGAGAGGAATCAGATGGTAATAAGACGCCTATCATTTTGAAATTACTGTTTATCATGATG
ATATGAATTTGTTTAAAACTGTTCATACCAGGTTTGGGATGTTTGAATTTTCTTTCAAAT
ACCTTTGTAAAGAATTGCCTGAATTTGTGATAGGTACAGCCTTTATAATTCTACTATTAT
ATGCATGTGGCGATTGATTTTTTATGTGTTAAGGACTGATGGTTCATAACTTCATATGTG
C

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7859#0      CAACCCAACCTCAACCTCAACCTCAAGCTCTCCTCCTCCTTCCTCCTCTGCTCCTGCTCC 60
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TGCTCCTGCTGCTGCCGTGTGCTCTGCTGGCTGCTCCTGCTGGTGAGGTGGTGGTCTCTC 120
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TCCCCCCACTTCACCATCTCCTCCTCTCCTTCGCCGCCGGCGCGCTTGCTTCCTCCTCAG 180
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CACGCCACCTCCTCGCCCCTCCTCATAGCTCAATCAGATTACTCGACCGTGCAAACATCC 240
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TGACCATTTTCTACAGCCCCGCGCTTTAGCGTTCTTGTTTTTTTTTTTTTGGCTGCTGCT 300
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GATTTGGTGGCGGCGGCTATCTTGGAGAGAGATACAGAATCCGTGCTTCTTCTTGAGCGA 360
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GCTGGTTGGTTGGTGGCATGAGGCGTGGAGAGCTTCAGAGTGAGTGCCATGGCGCGTGTT 420
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GATTGCTGTTGGTGGTGAGATGGAGGGTGGTAGGCTAGGAGGAGCGGCGGCTTCAGCATC 480
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GGCGGCGGCGGCGGCGGACGCGCGCGGCGGGATGTCGGGCTTCGCGGCTCCTCAGCACGC 540
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CATCCATACAAATTTGAACAACGTGCAACCTACTCAAGTTACTGATTTTGGGGCACTTGC 600
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ---------CAATCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGA 51
                                                                                  

consensus_7859#0      GCAGTCTGCTGGATTCCGAATAGAAGATCTCGCTAATCTCAGTACAAATGGTTTGTTCAA 660
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      GAATTATGTAAAGGTATGCAGGCCATGAACGGATAATTCCTCATGACAGATCTGATGGTC 111
                                                                                  

consensus_7859#0      TCTGAAGTCAAATGCTCATACCATTATCAATGACCCCCTCCAATTTGAGAATTATGTAAA 720
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      TTTTATAAAGTAAAATTCCACCCACACCAGGAATTCATGCAGTTTTCCCTCCTGGTTGCA 171
                                                                                  

consensus_7859#0      GTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGAC 780
consensus_7859#1      -------------------------------------AGGTCAGTAGTTGACCCTCAGAC 23
consensus_7859#2      GTCTATTTCTCCGTCTAATATTACTACAACAGCAACAGTAACAGTAGTTGACCCTCAGAC 231
                                                               *******************

consensus_7859#0      ACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGA 840
consensus_7859#1      ACTGGTCCCACAAAAGGGAGCACAACTGAATTGGGTAACTATAAGGACTGGTAACGTTGA 83
consensus_7859#2      ACTGGTCCCACAAAAGGGAGCACAACTGAATTTGGTAACTATAAGGACTGGTAACGTTGA 291
                      ******************************** ***************************

consensus_7859#0      GAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCC 900
consensus_7859#1      GAATTGGGGGGAGTCGACTATGGCTGATACAAGTCCAAGGACTGATACATCAACAGATCC 143
consensus_7859#2      GAATTGGGGGGAGTCGACTATTGCTGATACAAGTCCAAGGACTGATACATCAACAGATCC 351
                      ********************* **************************************

consensus_7859#0      AGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTC 960
consensus_7859#1      AGACACTGATGAGAGGAATCAGATGTTTGAACAAGGACAGTTAGCTGCTCCCACTGCTTC 203
consensus_7859#2      AGACACTGATGAGAGGAATCAGATGGTAATAAGACGCCTATCA--TTTTGAAATTACTGT 409
                      ************************* *   *  * * *  * *  *  *   * * **  

consensus_7859#0      TGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCA 1020
consensus_7859#1      TGATTCTAGTGACAGGTCAAAGGACAAACTAGATCATAAGACACTTCGCCGCCTTGCCCA 263
consensus_7859#2      TTATCATGATGATATG----------AATTTGTT--TAAAACTGTTCAT-ACCAGGTTTG 456
                      * **  *  *** * *          ** * * *  *** **  ***    **  *    

consensus_7859#0      AAAT-CGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTG 1079
consensus_7859#1      AAAT-CGTGAAGCTGCTAGGAAAAGCCGTTTAAGAAAGAAGGCATATATCCAAAACCTTG 322
consensus_7859#2      GGATGTTTGAATTTTCTTTCAAATACC-TTTGTAAAGAATTGCCTGAATTTGTGA---TA 512
                        **   ****  * **   ***  ** ***   **  *  ** *  **     *   * 

consensus_7859#0      AGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGG 1139
consensus_7859#1      AGAGTAGCAGATTGAAACTTACTCAGATAGAGCAAGAGCTTCAGCGGGCTCGTCAACAGG 382
consensus_7859#2      GGTACAGCCTTTATAATTCTACTATTATA---------------TGCATGTGGCGATTGA 557
                       *   ***   *  **   ****   ***                *     * * *  * 

consensus_7859#0      GCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGG 1199
consensus_7859#1      GCATTTTTATATCAACATCGAGTGATCAGTCCCACTCAGCGAGTGGAAATGGAGCTTTGG 442
consensus_7859#2      TTTTTTATGTGTTAAGGACTGATGGTTCAT--AACTTCATATGTGC-------------- 601
                         *** * * * **   *   ** *   *   ***      ***               

consensus_7859#0      CATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGA 1259
consensus_7859#1      CATTTGACATGGAGTATGCACGGTGGTTGGAGGAGCATAACAAACATATAAATGAGTTGA 502
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTA 1319
consensus_7859#1      GGGCTGCAGTTAATGCACACGCTGGTGATAATGATCTCAAAAGTACAGTTGATAGTATTA 562
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTC 1379
consensus_7859#1      TGGCACACTACAATGAAATTTTCAAGCTCAAGGGTGTGGCAGCCAAAGCAGACGTTTTTC 622
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      ATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCT 1439
consensus_7859#1      ATGTGCTGTCGGGAATGTGGAAAACCCCTGCTGAGAGGTGCTTCATGTGGCTAGGTGGCT 682
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TCCGATCATCTGAGCTTCTTAAGGTAAGAATATACTATTATTATATTGCGCCTACTTATT 1499
consensus_7859#1      TCCGATCATCTGAGCTTCTTAAGTTACTGGCAGGGCA--ATTAGA----GCCT-CTTACA 735
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TTGAAGCCTCACCCGGAGGCAAAATGCTGACCTGAATATATATTATTTTAATTGATCCAA 1559
consensus_7859#1      GAGCAGCA--GCTTGCTGGCATA--GCCAACCTGCA-ACA-ATCCTCCCAACAGGCTGAA 789
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TATTTTTCTTAGGCTCTGTTTTTTTTGAAAGGAATACTACCAGGCAATGGCCCAGTAGTG 1619
consensus_7859#1      GAT---------GCTCTTTCTCAAGGGATGGAAGCACTACAA--CAGTCGCTT-GCAGAG 837
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TATTTTATAGAAGCCAACAAAGTTTTTACAGGGAAAAAAAGAAAAAATACAAAAGGC-TA 1678
consensus_7859#1      ACCCTGGCATCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATG 897
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CAACCCCCTATAGAAGCTATAAAGTTTGTAACCAATTAGAAACCAATTGTCTAAGATCAT 1738
consensus_7859#1      GGACAAATGGCAATGGCTATG--------------------------------------- 918
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CATTCATCCTACACATATGTAGAAGAATTTCATGCTTAAAAGAATTCCACCAGCTGTCAA 1798
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      ATGAAGGATCTATATTCTGGAAAATCTTTCCATTCCTTTGCTTCCAAATGTGCCAACACG 1858
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CAATGAAATAAATCTCCAAGAATCCTTTTTTCTGAAATCTCAATCTTGCTAGCACCAGCA 1918
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TCCTTTTTTCTGAAAGAATTCTAGAGAAGTGTTCCAAGATATTCCCAGCTTCTGCCAACA 1978
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TTTTCTACTAAAAGGGCATTGAAAGAACAGGTGAGACAAAGTTTCTCTGTCATGCAAAGG 2038
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GCATAAGACACAAGTAAGATCAGCATTTAGGGGGGCGTATTTTCTCCTGTCCAACATGTC 2098
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TCTCGTGTTCAGCCTATCAGAGAAAAGAAGCCATATGAAAACTTTTATCTTCATCACACA 2158
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TTTGCTCTTCCAGATCCATCGGAAAGGTCTGGGAGGTTGCGTGGATGCAAAATTCAACTT 2218
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GTAAAAAGCTTTTGAGGTGTAATTGTTCCTGCCCCATATAAAACTCCAATTATCCCCCTG 2278
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CTGACTTGCTAAGGACAGAGCATCCAGCTCTCCCTTTAGCAGCAGAAATTCTGTGTAAGC 2338
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TTCCTGGGTCAGTGGCAACTTAAAACAATCCTCAAAAGGTTTAGCACAGGTGACAGCCAA 2398
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GGAATCATTTCTGGCAATGGCATGGCCACATAGATGTGGTTACTGGCAGGGCAATTAGAG 2458
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      CCTCTTACAGAGCAGCAGCTTGCTGGCATAGCCAACCTGCAACAATCCTCCCAACAGGCT 2518
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GAAGATGCTCTTTCTCAAGGGATGGAAGCACTACAACAGTCGCTTGCAGAGACCCTGGCA 2578
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      TCAGGATCTCTCGGCCCTGCAGGATCTTCTGGTAATGTTGCAAACTACATGGGACAAATG 2638
consensus_7859#1      ------------------------------------------------------------
consensus_7859#2      ------------------------------------------------------------
                                                                                  

consensus_7859#0      GCAATGGCTATG 2650
consensus_7859#1      ------------
consensus_7859#2      ------------