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Oryza sativa
cluster # 787 cluster # 787       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_787#0 length = 3263 sequences # 1  
consensus_787#1 length = 1204 sequences # 1  

consensusID : consensus_787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3263
fasta sequence
                              [ATCAACGTCCGCTCGCCCTCGAGAGCGCCCCTTCATCCCCTCGCTTTGCGCCTTTGCACCACGCCCCTCGCACCTGCCCCCCCTCATCCCCCTCACACCTTCCAAGTCCCACTGCCTGGCCCCGACCGCAGCACGTCATGGCCTACCAAGGAGGACCCGGGGCAAACAGCTACGGCGACCCTCACGCACCTCACCCATACGAGGCCCGCCACGAAGAGGAGGAAGTTGGACGCTCGCTCCTCCACTCAAACCCTACCGGCACACAACAGGGGCCCTTCGACGACCATCACGGCGTCTACGGCCACGACCAGCGCCCGCAGTCGACCTACAGCCTGACCGAGACTTACGCCTCAGATGCCCCTCAGACACAGTATGCCCCACAGTCGCACTCTGGCTCAGACGTCTACTCGGCCACTGGCGGCTACGACCCTTCCACCGAGTATGGCGCACCGCACAGGGCCACTTCGCCTTACGCGCGGAGTGAGACCAGCTCCACAGAGGCCTGGAAACAGCGCCAGCAGCCCGGCGGCGGCATGGGCCTCAAGCGTGGTCTGACGCGTAAGGTCAAGTCGGTCCAAGGCTCCGTCCTTTCGGCCGACTACCCCGTGCCAAGTGCCATCCAGAATGCCATCCAGGCAAAGTACCGCAATGACCTCGAGAGCGGCAGTGAGGAGTTCACCCACATGCGATACACGGCCGCCACATGCGACCCCAACGACTTCACATTGAAGAACGGCTACAATCTGCGGCCAGCCATGTACAATCGCCACACTGAGTTGCTCATCGCCATCACCTACTACAACGAAGACAAGGTGCTTACCGCCCGTACTCTGCATGGTGTCATGCAGAACATCCGTGATATTGTCAACCTGAAGAAGTCTGAGTTCTGGAACAGGGGTGGTCCCGCCTGGCAGAAGATCGTTGTCTGCTTGGTTTTCGACGGTATCGACCCTTGCGACAAGGGCACCCTCGATCTGCCTGCGACCGTTGGTATCTACCAGGACGGTGTCATGAAGAAGGACATTGACGGCAAGGAGACCACTGCCCACATTTTCGAATACACCACTCAATTGTCCGTGACACCCAACCAGCAGCTTATCCGCCCGCACGATGACAGTGCCAGCACCCTGCCACCCGTTCAGATGATGTTCTGTCTGAAGCAGAAGAACACAAAGAAGATCAATTCTCATCGTTGGCTCTTCACTGCCTTCGGCCGTATCCTTAACCCCGAAGTTTGCATTCTGCTCGATGCCGGCACTAAGCCCGGTCCAAAGTCCCTGCTTGCGCTGTGGGAGGCTTTCTACAACGACAAAGATCTAGGTGGTGCTTGCGGTGAGATCCACGCTATGCTCGGAAAGGGTTGGAAGAACTTGCTGAATCCGCTAATCGCAACTCAAAACTTCGAGTACAAGATTTCCAATATTCTCGATAAGCCTCTTGAGTCATCTTTTGGCTATGTTTCCGTCTTGCCCGGTGCCTTCTCCGCTTACCGTTACCGCGCCATTATGGGCAGGCCGCTTGAGCAATACTTCCACGGTGACCACACACTTGCCAAGATTCTTGGAAAGAAGGGTATTGAAGGCATGAACATTTTCAAAAAGAACATGTTCTTGGCCGAAGATCGTATTCTTTGCTTCGAACTTGTGGCGAAAGCTGGCTCGAAGTGGCATTTGACATATGTCAAGTCCTCCAAGGGTGAGACTGACGTGCCCGAAGGTGCTGCTGAGTTTATTGGTCAGCGTCGTCGTTGGTTGAACGGTTCCTTTGCTGCCGGTATCTACTCGCTGATGCACTTTGGCCGCATGTACAAGTCCGGTCACAACCTCATTCGCATGTTCTTCTTCCACATCCAGCTGCTTTACAACATCTTCCAGACCATTCTCTCTTGGTTCGCCCTTGCTTCTTTCTGGCTCACTACATCAATCATCATGACTCTGGTCGGTAACCCCGAACCCAAGGCCAATCCACCGAAGAAGGCCTGGCCGTTCGGTGACAAGTTCACTCCTACCTTCAACACGGTTGTCCAGTACATCTACCTCGCCTTCCTGGGTCTCCAGTTCATTCTCGCTCTCGGTAACCGTCCCAAGGGTTCGCGATGGTCTTACATGACGTCCTTCATTGTGTTTGCTCTGATTCAATTCTACATCATCGTTCTGTCCATCTACCTTGTCGTCGTTGCCTTTTCGGGCAAAGGCACCAAGGGCATCAACACCGATTCCGCCAAGTCCTTCTTCACCTCTTTCACGAGCAACGACGGTATCGGTATCATCATTCTCGCTATGGCTGCAACCTTCGGTCTGTACCATGTCGCTTCGTTCCTGTACATGGATCCATGGCACATGTTCACCTCCTTCCCTCAGTACCTCCTCATTGCGTCGTCGTACATCAACATTCTCAACGTCTACGCCTTCTCTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTTCCGACAAGGCGGATGCCCTGCCGTCGGCCAAGACCGAAAAGGCTTCTGACGGTAAACACACGGTCATTGAAGAGCCCGATCTCCCGCAAGCCGATATTGACAGCCAGTTCGAGGCGACCGTCAAGCGCGCGCTTGCACCCTACGTTCCTCCCGTCGAATCGAACGAGAAGACTCTGGAGGATTCGTACAAATCTTTCCGTACCCACTTGACAACTGCTTGGATTGGTATGAACGCGTTGCTTGCCGTGGCTGTTCAGCAGGACGACATGACCAAATTTGGCTTCACGTCATCTTCGAACGAACGTACTGCCGCCTTCTTCAAGTTCCTTCTCGTCTCCACAGCCATTCTTGCTCTTATCCGCTTCATGGGTTGCCTGTGGTTCTTGGGTCGCAGTGGTATCTTCTTCTGCGTCCGCAAGAGATAAAGGCACTATCGCCAAGCTTATGAACCCCACCCCGTTCCTTACAACGGCCTTGTTATACCACCATGTGTGATTTTTCCGATTCCCCTAATGTTTTTGTTCGCGCTTCCGGGTGCTGGCGTTTTGGCATATCCATTGGACTCCAGCCGGCTGGGTTGGCTCATCTTATCGGTAAAGAAAAAACTTGTCACGTCAGTTATGCTTGACTGGATCGCAAGGTCGGTTGGCATCCCCATTGTACTATTTGGCTTCTGCAGGCGCCAATACTTTTGTTATTGGGGGAGATGAAAGCCGGCAAGAAGAACGGAAGCTTTATGATTGTGATACACGAGTCATCTCCGTGTTTTTTTTTGGACCATTGGAGTGCGATTTAGAATGAGCAATTCGAACACT]

[+] EMBL AK110301             [ATCAACGTCCGCTCGCCCTCGAGAGCGCCCCTTCATCCCCTCGCTTTGCGCCTTTGCACCACGCCCCTCGCACCTGCCCCCCCTCATCCCCCTCACACCTTCCAAGTCCCACTGCCTGGCCCCGACCGCAGCACGTCATGGCCTACCAAGGAGGACCCGGGGCAAACAGCTACGGCGACCCTCACGCACCTCACCCATACGAGGCCCGCCACGAAGAGGAGGAAGTTGGACGCTCGCTCCTCCACTCAAACCCTACCGGCACACAACAGGGGCCCTTCGACGACCATCACGGCGTCTACGGCCACGACCAGCGCCCGCAGTCGACCTACAGCCTGACCGAGACTTACGCCTCAGATGCCCCTCAGACACAGTATGCCCCACAGTCGCACTCTGGCTCAGACGTCTACTCGGCCACTGGCGGCTACGACCCTTCCACCGAGTATGGCGCACCGCACAGGGCCACTTCGCCTTACGCGCGGAGTGAGACCAGCTCCACAGAGGCCTGGAAACAGCGCCAGCAGCCCGGCGGCGGCATGGGCCTCAAGCGTGGTCTGACGCGTAAGGTCAAGTCGGTCCAAGGCTCCGTCCTTTCGGCCGACTACCCCGTGCCAAGTGCCATCCAGAATGCCATCCAGGCAAAGTACCGCAATGACCTCGAGAGCGGCAGTGAGGAGTTCACCCACATGCGATACACGGCCGCCACATGCGACCCCAACGACTTCACATTGAAGAACGGCTACAATCTGCGGCCAGCCATGTACAATCGCCACACTGAGTTGCTCATCGCCATCACCTACTACAACGAAGACAAGGTGCTTACCGCCCGTACTCTGCATGGTGTCATGCAGAACATCCGTGATATTGTCAACCTGAAGAAGTCTGAGTTCTGGAACAGGGGTGGTCCCGCCTGGCAGAAGATCGTTGTCTGCTTGGTTTTCGACGGTATCGACCCTTGCGACAAGGGCACCCTCGATCTGCCTGCGACCGTTGGTATCTACCAGGACGGTGTCATGAAGAAGGACATTGACGGCAAGGAGACCACTGCCCACATTTTCGAATACACCACTCAATTGTCCGTGACACCCAACCAGCAGCTTATCCGCCCGCACGATGACAGTGCCAGCACCCTGCCACCCGTTCAGATGATGTTCTGTCTGAAGCAGAAGAACACAAAGAAGATCAATTCTCATCGTTGGCTCTTCACTGCCTTCGGCCGTATCCTTAACCCCGAAGTTTGCATTCTGCTCGATGCCGGCACTAAGCCCGGTCCAAAGTCCCTGCTTGCGCTGTGGGAGGCTTTCTACAACGACAAAGATCTAGGTGGTGCTTGCGGTGAGATCCACGCTATGCTCGGAAAGGGTTGGAAGAACTTGCTGAATCCGCTAATCGCAACTCAAAACTTCGAGTACAAGATTTCCAATATTCTCGATAAGCCTCTTGAGTCATCTTTTGGCTATGTTTCCGTCTTGCCCGGTGCCTTCTCCGCTTACCGTTACCGCGCCATTATGGGCAGGCCGCTTGAGCAATACTTCCACGGTGACCACACACTTGCCAAGATTCTTGGAAAGAAGGGTATTGAAGGCATGAACATTTTCAAAAAGAACATGTTCTTGGCCGAAGATCGTATTCTTTGCTTCGAACTTGTGGCGAAAGCTGGCTCGAAGTGGCATTTGACATATGTCAAGTCCTCCAAGGGTGAGACTGACGTGCCCGAAGGTGCTGCTGAGTTTATTGGTCAGCGTCGTCGTTGGTTGAACGGTTCCTTTGCTGCCGGTATCTACTCGCTGATGCACTTTGGCCGCATGTACAAGTCCGGTCACAACCTCATTCGCATGTTCTTCTTCCACATCCAGCTGCTTTACAACATCTTCCAGACCATTCTCTCTTGGTTCGCCCTTGCTTCTTTCTGGCTCACTACATCAATCATCATGACTCTGGTCGGTAACCCCGAACCCAAGGCCAATCCACCGAAGAAGGCCTGGCCGTTCGGTGACAAGTTCACTCCTACCTTCAACACGGTTGTCCAGTACATCTACCTCGCCTTCCTGGGTCTCCAGTTCATTCTCGCTCTCGGTAACCGTCCCAAGGGTTCGCGATGGTCTTACATGACGTCCTTCATTGTGTTTGCTCTGATTCAATTCTACATCATCGTTCTGTCCATCTACCTTGTCGTCGTTGCCTTTTCGGGCAAAGGCACCAAGGGCATCAACACCGATTCCGCCAAGTCCTTCTTCACCTCTTTCACGAGCAACGACGGTATCGGTATCATCATTCTCGCTATGGCTGCAACCTTCGGTCTGTACCATGTCGCTTCGTTCCTGTACATGGATCCATGGCACATGTTCACCTCCTTCCCTCAGTACCTCCTCATTGCGTCGTCGTACATCAACATTCTCAACGTCTACGCCTTCTCTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTTCCGACAAGGCGGATGCCCTGCCGTCGGCCAAGACCGAAAAGGCTTCTGACGGTAAACACACGGTCATTGAAGAGCCCGATCTCCCGCAAGCCGATATTGACAGCCAGTTCGAGGCGACCGTCAAGCGCGCGCTTGCACCCTACGTTCCTCCCGTCGAATCGAACGAGAAGACTCTGGAGGATTCGTACAAATCTTTCCGTACCCACTTGACAACTGCTTGGATTGGTATGAACGCGTTGCTTGCCGTGGCTGTTCAGCAGGACGACATGACCAAATTTGGCTTCACGTCATCTTCGAACGAACGTACTGCCGCCTTCTTCAAGTTCCTTCTCGTCTCCACAGCCATTCTTGCTCTTATCCGCTTCATGGGTTGCCTGTGGTTCTTGGGTCGCAGTGGTATCTTCTTCTGCGTCCGCAAGAGATAAAGGCACTATCGCCAAGCTTATGAACCCCACCCCGTTCCTTACAACGGCCTTGTTATACCACCATGTGTGATTTTTCCGATTCCCCTAATGTTTTTGTTCGCGCTTCCGGGTGCTGGCGTTTTGGCATATCCATTGGACTCCAGCCGGCTGGGTTGGCTCATCTTATCGGTAAAGAAAAAACTTGTCACGTCAGTTATGCTTGACTGGATCGCAAGGTCGGTTGGCATCCCCATTGTACTATTTGGCTTCTGCAGGCGCCAATACTTTTGTTATTGGGGGAGATGAAAGCCGGCAAGAAGAACGGAAGCTTTATGATTGTGATACACGAGTCATCTCCGTGTTTTTTTTTGGACCATTGGAGTGCGATTTAGAATGAGCAATTCGAACACT]


>consensus_787#0 ATCAACGTCCGCTCGCCCTCGAGAGCGCCCCTTCATCCCCTCGCTTTGCGCCTTTGCACC ACGCCCCTCGCACCTGCCCCCCCTCATCCCCCTCACACCTTCCAAGTCCCACTGCCTGGC CCCGACCGCAGCACGTCATGGCCTACCAAGGAGGACCCGGGGCAAACAGCTACGGCGACC CTCACGCACCTCACCCATACGAGGCCCGCCACGAAGAGGAGGAAGTTGGACGCTCGCTCC TCCACTCAAACCCTACCGGCACACAACAGGGGCCCTTCGACGACCATCACGGCGTCTACG GCCACGACCAGCGCCCGCAGTCGACCTACAGCCTGACCGAGACTTACGCCTCAGATGCCC CTCAGACACAGTATGCCCCACAGTCGCACTCTGGCTCAGACGTCTACTCGGCCACTGGCG GCTACGACCCTTCCACCGAGTATGGCGCACCGCACAGGGCCACTTCGCCTTACGCGCGGA GTGAGACCAGCTCCACAGAGGCCTGGAAACAGCGCCAGCAGCCCGGCGGCGGCATGGGCC TCAAGCGTGGTCTGACGCGTAAGGTCAAGTCGGTCCAAGGCTCCGTCCTTTCGGCCGACT ACCCCGTGCCAAGTGCCATCCAGAATGCCATCCAGGCAAAGTACCGCAATGACCTCGAGA GCGGCAGTGAGGAGTTCACCCACATGCGATACACGGCCGCCACATGCGACCCCAACGACT TCACATTGAAGAACGGCTACAATCTGCGGCCAGCCATGTACAATCGCCACACTGAGTTGC TCATCGCCATCACCTACTACAACGAAGACAAGGTGCTTACCGCCCGTACTCTGCATGGTG TCATGCAGAACATCCGTGATATTGTCAACCTGAAGAAGTCTGAGTTCTGGAACAGGGGTG GTCCCGCCTGGCAGAAGATCGTTGTCTGCTTGGTTTTCGACGGTATCGACCCTTGCGACA AGGGCACCCTCGATCTGCCTGCGACCGTTGGTATCTACCAGGACGGTGTCATGAAGAAGG ACATTGACGGCAAGGAGACCACTGCCCACATTTTCGAATACACCACTCAATTGTCCGTGA CACCCAACCAGCAGCTTATCCGCCCGCACGATGACAGTGCCAGCACCCTGCCACCCGTTC AGATGATGTTCTGTCTGAAGCAGAAGAACACAAAGAAGATCAATTCTCATCGTTGGCTCT TCACTGCCTTCGGCCGTATCCTTAACCCCGAAGTTTGCATTCTGCTCGATGCCGGCACTA AGCCCGGTCCAAAGTCCCTGCTTGCGCTGTGGGAGGCTTTCTACAACGACAAAGATCTAG GTGGTGCTTGCGGTGAGATCCACGCTATGCTCGGAAAGGGTTGGAAGAACTTGCTGAATC CGCTAATCGCAACTCAAAACTTCGAGTACAAGATTTCCAATATTCTCGATAAGCCTCTTG AGTCATCTTTTGGCTATGTTTCCGTCTTGCCCGGTGCCTTCTCCGCTTACCGTTACCGCG CCATTATGGGCAGGCCGCTTGAGCAATACTTCCACGGTGACCACACACTTGCCAAGATTC TTGGAAAGAAGGGTATTGAAGGCATGAACATTTTCAAAAAGAACATGTTCTTGGCCGAAG ATCGTATTCTTTGCTTCGAACTTGTGGCGAAAGCTGGCTCGAAGTGGCATTTGACATATG TCAAGTCCTCCAAGGGTGAGACTGACGTGCCCGAAGGTGCTGCTGAGTTTATTGGTCAGC GTCGTCGTTGGTTGAACGGTTCCTTTGCTGCCGGTATCTACTCGCTGATGCACTTTGGCC GCATGTACAAGTCCGGTCACAACCTCATTCGCATGTTCTTCTTCCACATCCAGCTGCTTT ACAACATCTTCCAGACCATTCTCTCTTGGTTCGCCCTTGCTTCTTTCTGGCTCACTACAT CAATCATCATGACTCTGGTCGGTAACCCCGAACCCAAGGCCAATCCACCGAAGAAGGCCT GGCCGTTCGGTGACAAGTTCACTCCTACCTTCAACACGGTTGTCCAGTACATCTACCTCG CCTTCCTGGGTCTCCAGTTCATTCTCGCTCTCGGTAACCGTCCCAAGGGTTCGCGATGGT CTTACATGACGTCCTTCATTGTGTTTGCTCTGATTCAATTCTACATCATCGTTCTGTCCA TCTACCTTGTCGTCGTTGCCTTTTCGGGCAAAGGCACCAAGGGCATCAACACCGATTCCG CCAAGTCCTTCTTCACCTCTTTCACGAGCAACGACGGTATCGGTATCATCATTCTCGCTA TGGCTGCAACCTTCGGTCTGTACCATGTCGCTTCGTTCCTGTACATGGATCCATGGCACA TGTTCACCTCCTTCCCTCAGTACCTCCTCATTGCGTCGTCGTACATCAACATTCTCAACG TCTACGCCTTCTCTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTTCCGACAAGGCGG ATGCCCTGCCGTCGGCCAAGACCGAAAAGGCTTCTGACGGTAAACACACGGTCATTGAAG AGCCCGATCTCCCGCAAGCCGATATTGACAGCCAGTTCGAGGCGACCGTCAAGCGCGCGC TTGCACCCTACGTTCCTCCCGTCGAATCGAACGAGAAGACTCTGGAGGATTCGTACAAAT CTTTCCGTACCCACTTGACAACTGCTTGGATTGGTATGAACGCGTTGCTTGCCGTGGCTG TTCAGCAGGACGACATGACCAAATTTGGCTTCACGTCATCTTCGAACGAACGTACTGCCG CCTTCTTCAAGTTCCTTCTCGTCTCCACAGCCATTCTTGCTCTTATCCGCTTCATGGGTT GCCTGTGGTTCTTGGGTCGCAGTGGTATCTTCTTCTGCGTCCGCAAGAGATAAAGGCACT ATCGCCAAGCTTATGAACCCCACCCCGTTCCTTACAACGGCCTTGTTATACCACCATGTG TGATTTTTCCGATTCCCCTAATGTTTTTGTTCGCGCTTCCGGGTGCTGGCGTTTTGGCAT ATCCATTGGACTCCAGCCGGCTGGGTTGGCTCATCTTATCGGTAAAGAAAAAACTTGTCA CGTCAGTTATGCTTGACTGGATCGCAAGGTCGGTTGGCATCCCCATTGTACTATTTGGCT TCTGCAGGCGCCAATACTTTTGTTATTGGGGGAGATGAAAGCCGGCAAGAAGAACGGAAG CTTTATGATTGTGATACACGAGTCATCTCCGTGTTTTTTTTTGGACCATTGGAGTGCGAT TTAGAATGAGCAATTCGAACACT



consensusID : consensus_787#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1204
fasta sequence
                              [CGCATTCCTGGTCTTGCAGTTCATTTTGGCCTTTGGTAATCGTCCAAAGGGTTCCAAGTACTCTTACTTGGTATCCTTCTGCGTCTTCGGTCTCATCCAGCTCTACATTGTCATCCTGTCCATCTACCTCGTCGTTCAGGCCTTTACCAATCCGTCCTCTGAGAAGCTGGATACCTCGTCACCAGAAGCATTTGCCAGATCCTTCTTCTCGTCAAGTGGTGTTGGTATCATTATCATCGCTCTTGCCGCGACTTTCGGTCTCTACTACGTCGCATCCTTCCTCTACATGGACCCCTGGCACATGTTCACCTCGTTCCCGCAATACCTGCTCATCATGTCCTCGTACATCAACATTCTCAACGTCTACGCCTTCTCCAACTGGCACGATGTGTCCTGGGGTACCAAGGGTTCCGACAAGGCGGATCTTCTGCCATCAGCCAAGACAGAGAAAGGATCAGATGGAAAGCACAACGTCATTGAGGAGCCTGATCTGCCCCAGGCTGATATTGACAGTGCATTCGAGGCCACTGTGAAGCGTGCTCTTGCCCCGTACGTCCCACCAGAGGAGAAGGACGAGAAGACCCTCGAGGATTCGTACAAGTCTTTCCGTACCCATCTGTGTACCGCCTGGATTGGTTCCAACGCTACCCTTGCCGTTGTCATTACCCAAGATAACTTTGACCGCTTTGGTTTCTCTTCGAACGCCTCTGCCAGAACCGCACACTTCTTCCAGGCTCTCCTGTGGTCTACTGCAGTACTTGCCTTGATTCGTTTCATTGGATGTCTGTGGTTCCTTGGTCGCACTGGTCTCTTCTTCTGCGTGCGGAAGAGGTAAAGTGGCGTATGCACTACTGCAACGTCCGCTTTTGTGTTTCTAAAGCCCTGCTTCGATTACCCTAATCAGATATAATTGGCGTTTCTTGGTGTCGTTGGGCTTGAGCAGCAGCTAGGAGCTGTGGTTTTTGCTTGTTTCCGAAAAGAAAAATATCACGCGCGCATGTCAGGCGTGGATTCACCGCGTGATTCCTCGTCCGACGTGTCACAGATATGAAATGTTTGGTTCCATTTGGAAAGGGGGAGCGGCAAAGACATCTATGCCCAATATTTTGTGTCATGGGAGGCCTGCTGGCTTGCTTTTATGCACGCTAGAGATGTATGGGCTTTTTATATTCAGACTTTAGATTGGAAATACCACAAATATGTT]

[+] EMBL AK059206             [CGCATTCCTGGTCTTGCAGTTCATTTTGGCCTTTGGTAATCGTCCAAAGGGTTCCAAGTACTCTTACTTGGTATCCTTCTGCGTCTTCGGTCTCATCCAGCTCTACATTGTCATCCTGTCCATCTACCTCGTCGTTCAGGCCTTTACCAATCCGTCCTCTGAGAAGCTGGATACCTCGTCACCAGAAGCATTTGCCAGATCCTTCTTCTCGTCAAGTGGTGTTGGTATCATTATCATCGCTCTTGCCGCGACTTTCGGTCTCTACTACGTCGCATCCTTCCTCTACATGGACCCCTGGCACATGTTCACCTCGTTCCCGCAATACCTGCTCATCATGTCCTCGTACATCAACATTCTCAACGTCTACGCCTTCTCCAACTGGCACGATGTGTCCTGGGGTACCAAGGGTTCCGACAAGGCGGATCTTCTGCCATCAGCCAAGACAGAGAAAGGATCAGATGGAAAGCACAACGTCATTGAGGAGCCTGATCTGCCCCAGGCTGATATTGACAGTGCATTCGAGGCCACTGTGAAGCGTGCTCTTGCCCCGTACGTCCCACCAGAGGAGAAGGACGAGAAGACCCTCGAGGATTCGTACAAGTCTTTCCGTACCCATCTGTGTACCGCCTGGATTGGTTCCAACGCTACCCTTGCCGTTGTCATTACCCAAGATAACTTTGACCGCTTTGGTTTCTCTTCGAACGCCTCTGCCAGAACCGCACACTTCTTCCAGGCTCTCCTGTGGTCTACTGCAGTACTTGCCTTGATTCGTTTCATTGGATGTCTGTGGTTCCTTGGTCGCACTGGTCTCTTCTTCTGCGTGCGGAAGAGGTAAAGTGGCGTATGCACTACTGCAACGTCCGCTTTTGTGTTTCTAAAGCCCTGCTTCGATTACCCTAATCAGATATAATTGGCGTTTCTTGGTGTCGTTGGGCTTGAGCAGCAGCTAGGAGCTGTGGTTTTTGCTTGTTTCCGAAAAGAAAAATATCACGCGCGCATGTCAGGCGTGGATTCACCGCGTGATTCCTCGTCCGACGTGTCACAGATATGAAATGTTTGGTTCCATTTGGAAAGGGGGAGCGGCAAAGACATCTATGCCCAATATTTTGTGTCATGGGAGGCCTGCTGGCTTGCTTTTATGCACGCTAGAGATGTATGGGCTTTTTATATTCAGACTTTAGATTGGAAATACCACAAATATGTT]


>consensus_787#1 CGCATTCCTGGTCTTGCAGTTCATTTTGGCCTTTGGTAATCGTCCAAAGGGTTCCAAGTA CTCTTACTTGGTATCCTTCTGCGTCTTCGGTCTCATCCAGCTCTACATTGTCATCCTGTC CATCTACCTCGTCGTTCAGGCCTTTACCAATCCGTCCTCTGAGAAGCTGGATACCTCGTC ACCAGAAGCATTTGCCAGATCCTTCTTCTCGTCAAGTGGTGTTGGTATCATTATCATCGC TCTTGCCGCGACTTTCGGTCTCTACTACGTCGCATCCTTCCTCTACATGGACCCCTGGCA CATGTTCACCTCGTTCCCGCAATACCTGCTCATCATGTCCTCGTACATCAACATTCTCAA CGTCTACGCCTTCTCCAACTGGCACGATGTGTCCTGGGGTACCAAGGGTTCCGACAAGGC GGATCTTCTGCCATCAGCCAAGACAGAGAAAGGATCAGATGGAAAGCACAACGTCATTGA GGAGCCTGATCTGCCCCAGGCTGATATTGACAGTGCATTCGAGGCCACTGTGAAGCGTGC TCTTGCCCCGTACGTCCCACCAGAGGAGAAGGACGAGAAGACCCTCGAGGATTCGTACAA GTCTTTCCGTACCCATCTGTGTACCGCCTGGATTGGTTCCAACGCTACCCTTGCCGTTGT CATTACCCAAGATAACTTTGACCGCTTTGGTTTCTCTTCGAACGCCTCTGCCAGAACCGC ACACTTCTTCCAGGCTCTCCTGTGGTCTACTGCAGTACTTGCCTTGATTCGTTTCATTGG ATGTCTGTGGTTCCTTGGTCGCACTGGTCTCTTCTTCTGCGTGCGGAAGAGGTAAAGTGG CGTATGCACTACTGCAACGTCCGCTTTTGTGTTTCTAAAGCCCTGCTTCGATTACCCTAA TCAGATATAATTGGCGTTTCTTGGTGTCGTTGGGCTTGAGCAGCAGCTAGGAGCTGTGGT TTTTGCTTGTTTCCGAAAAGAAAAATATCACGCGCGCATGTCAGGCGTGGATTCACCGCG TGATTCCTCGTCCGACGTGTCACAGATATGAAATGTTTGGTTCCATTTGGAAAGGGGGAG CGGCAAAGACATCTATGCCCAATATTTTGTGTCATGGGAGGCCTGCTGGCTTGCTTTTAT GCACGCTAGAGATGTATGGGCTTTTTATATTCAGACTTTAGATTGGAAATACCACAAATA TGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_787#0      ATCAACGTCCGCTCGCCCTCGAGAGCGCCCCTTCATCCCCTCGCTTTGCGCCTTTGCACC 60
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      ACGCCCCTCGCACCTGCCCCCCCTCATCCCCCTCACACCTTCCAAGTCCCACTGCCTGGC 120
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CCCGACCGCAGCACGTCATGGCCTACCAAGGAGGACCCGGGGCAAACAGCTACGGCGACC 180
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CTCACGCACCTCACCCATACGAGGCCCGCCACGAAGAGGAGGAAGTTGGACGCTCGCTCC 240
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCCACTCAAACCCTACCGGCACACAACAGGGGCCCTTCGACGACCATCACGGCGTCTACG 300
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GCCACGACCAGCGCCCGCAGTCGACCTACAGCCTGACCGAGACTTACGCCTCAGATGCCC 360
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CTCAGACACAGTATGCCCCACAGTCGCACTCTGGCTCAGACGTCTACTCGGCCACTGGCG 420
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GCTACGACCCTTCCACCGAGTATGGCGCACCGCACAGGGCCACTTCGCCTTACGCGCGGA 480
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GTGAGACCAGCTCCACAGAGGCCTGGAAACAGCGCCAGCAGCCCGGCGGCGGCATGGGCC 540
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCAAGCGTGGTCTGACGCGTAAGGTCAAGTCGGTCCAAGGCTCCGTCCTTTCGGCCGACT 600
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      ACCCCGTGCCAAGTGCCATCCAGAATGCCATCCAGGCAAAGTACCGCAATGACCTCGAGA 660
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GCGGCAGTGAGGAGTTCACCCACATGCGATACACGGCCGCCACATGCGACCCCAACGACT 720
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCACATTGAAGAACGGCTACAATCTGCGGCCAGCCATGTACAATCGCCACACTGAGTTGC 780
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCATCGCCATCACCTACTACAACGAAGACAAGGTGCTTACCGCCCGTACTCTGCATGGTG 840
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCATGCAGAACATCCGTGATATTGTCAACCTGAAGAAGTCTGAGTTCTGGAACAGGGGTG 900
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GTCCCGCCTGGCAGAAGATCGTTGTCTGCTTGGTTTTCGACGGTATCGACCCTTGCGACA 960
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      AGGGCACCCTCGATCTGCCTGCGACCGTTGGTATCTACCAGGACGGTGTCATGAAGAAGG 1020
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      ACATTGACGGCAAGGAGACCACTGCCCACATTTTCGAATACACCACTCAATTGTCCGTGA 1080
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CACCCAACCAGCAGCTTATCCGCCCGCACGATGACAGTGCCAGCACCCTGCCACCCGTTC 1140
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      AGATGATGTTCTGTCTGAAGCAGAAGAACACAAAGAAGATCAATTCTCATCGTTGGCTCT 1200
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCACTGCCTTCGGCCGTATCCTTAACCCCGAAGTTTGCATTCTGCTCGATGCCGGCACTA 1260
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      AGCCCGGTCCAAAGTCCCTGCTTGCGCTGTGGGAGGCTTTCTACAACGACAAAGATCTAG 1320
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GTGGTGCTTGCGGTGAGATCCACGCTATGCTCGGAAAGGGTTGGAAGAACTTGCTGAATC 1380
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CGCTAATCGCAACTCAAAACTTCGAGTACAAGATTTCCAATATTCTCGATAAGCCTCTTG 1440
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      AGTCATCTTTTGGCTATGTTTCCGTCTTGCCCGGTGCCTTCTCCGCTTACCGTTACCGCG 1500
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CCATTATGGGCAGGCCGCTTGAGCAATACTTCCACGGTGACCACACACTTGCCAAGATTC 1560
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TTGGAAAGAAGGGTATTGAAGGCATGAACATTTTCAAAAAGAACATGTTCTTGGCCGAAG 1620
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      ATCGTATTCTTTGCTTCGAACTTGTGGCGAAAGCTGGCTCGAAGTGGCATTTGACATATG 1680
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      TCAAGTCCTCCAAGGGTGAGACTGACGTGCCCGAAGGTGCTGCTGAGTTTATTGGTCAGC 1740
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GTCGTCGTTGGTTGAACGGTTCCTTTGCTGCCGGTATCTACTCGCTGATGCACTTTGGCC 1800
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GCATGTACAAGTCCGGTCACAACCTCATTCGCATGTTCTTCTTCCACATCCAGCTGCTTT 1860
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      ACAACATCTTCCAGACCATTCTCTCTTGGTTCGCCCTTGCTTCTTTCTGGCTCACTACAT 1920
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      CAATCATCATGACTCTGGTCGGTAACCCCGAACCCAAGGCCAATCCACCGAAGAAGGCCT 1980
consensus_787#1      ------------------------------------------------------------
                                                                                 

consensus_787#0      GGCCGTTCGGTGACAAGTTCACTCCTACCTTCAACACGGTTGTCCAGTACATCTACCTCG 2040
consensus_787#1      ----------------------------------------------------------CG 2
                                                                               **

consensus_787#0      CCTTCCTGGGTCTCCAGTTCATTCTCGCTCTCGGTAACCGTCCCAAGGGTTCGCGATGGT 2100
consensus_787#1      CATTCCTGGTCTTGCAGTTCATTTTGGCCTTTGGTAATCGTCCAAAGGGTTCCAAGTACT 62
                     * *******   * ********* * **  * ***** ***** ********    *  *

consensus_787#0      CTTACATGACGTCCTTCATTGTGTTTGCTCTGATTCAATTCTACATCATCGTTCTGTCCA 2160
consensus_787#1      CTTACTTGGTATCCTTCTGCGTCTTCGGTCTCATCCAGCTCTACATTGTCATCCTGTCCA 122
                     ***** **   ******   ** ** * *** ** **  *******  ** * *******

consensus_787#0      TCTACCTTGTCGTCGTTGCCTTTTCGGGCAAAGGCACCAAGGGCATCAACACCGATTCCG 2220
consensus_787#1      TCTACCTCGTCGTTCAGGCCTTTACCAATCCGTCCTCTGAGAAGCTGGATACCTCGTCAC 182
                     ******* *****    ****** *         * *  **    *  * ***   **  

consensus_787#0      CCAAGTCCTTCTTCACCTCTTTCACGAGCAACGACGGTATCGGTATCATCATTCTCGCTA 2280
consensus_787#1      CAGAAGCATTTGCCAGATCCTTCTTCTCGTCAAGTGGTGTTGGTATCATTATCATCGCTC 242
                     *  *  * **   **  ** ***            *** * ******** **  ***** 

consensus_787#0      TGGCTGCAACCTTCGGTCTGTACCATGTCGCTTCGTTCCTGTACATGGATCCATGGCACA 2340
consensus_787#1      TTGCCGCGACTTTCGGTCTCTACTACGTCGCATCCTTCCTCTACATGGACCCCTGGCACA 302
                     * ** ** ** ******** *** * ***** ** ***** ******** ** *******

consensus_787#0      TGTTCACCTCCTTCCCTCAGTACCTCCTCATTGCGTCGTCGTACATCAACATTCTCAACG 2400
consensus_787#1      TGTTCACCTCGTTCCCGCAATACCTGCTCATCATGTCCTCGTACATCAACATTCTCAACG 362
                     ********** ***** ** ***** *****   *** **********************

consensus_787#0      TCTACGCCTTCTCTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTTCCGACAAGGCGG 2460
consensus_787#1      TCTACGCCTTCTCCAACTGGCACGATGTGTCCTGGGGTACCAAGGGTTCCGACAAGGCGG 422
                     ************* *********** ** ** ****************************

consensus_787#0      ATGCCCTGCCGTCGGCCAAGACCGAAAAGGCTTCTGACGGTAAACACACGGTCATTGAAG 2520
consensus_787#1      ATCTTCTGCCATCAGCCAAGACAGAGAAAGGATCAGATGGAAAGCACAACGTCATTGAGG 482
                     **   ***** ** ******** ** ** *  ** ** ** ** ****  ******** *

consensus_787#0      AGCCCGATCTCCCGCAAGCCGATATTGACAGCCAGTTCGAGGCGACCGTCAAGCGCGCGC 2580
consensus_787#1      AGCCTGATCTGCCCCAGGCTGATATTGACAGTGCATTCGAGGCCACTGTGAAGCGTGCTC 542
                     **** ***** ** ** ** ***********    ******** ** ** ***** ** *

consensus_787#0      TTGCACCCTACGTTCCTCCCGTCGAATCGAACGAGAAGACTCTGGAGGATTCGTACAAAT 2640
consensus_787#1      TTGCCCCGTACGTCCCACCAGAGGAGAAGGACGAGAAGACCCTCGAGGATTCGTACAAGT 602
                     **** ** ***** ** ** *  **   * ********** ** ************** *

consensus_787#0      CTTTCCGTACCCACTTGACAACTGCTTGGATTGGTATGAACGCGTTGCTTGCCGTGGCTG 2700
consensus_787#1      CTTTCCGTACCCATCTGTGTACCGCCTGGATTGGTTCCAACGCTACCCTTGCCGTTGTCA 662
                     *************  **   ** ** *********   *****    ******** *   

consensus_787#0      TTCAGCAGGACGACATGACCAAATTTGGCTTCACGTCATCTTCGAACGAACGTACTGCCG 2760
consensus_787#1      TTACCCAAGATAACTTTGACCGCTTTGGTTTCTCTTCGAACGCCTCTGCCAGAACCGCAC 722
                     **   ** **  ** *   *   ***** *** * **     *    *   * ** **  

consensus_787#0      CCTTCTTCAAGTTCCTTCTCGTCTCCACAGCCATTCTTGCTCTTATCCGCTTCATGGGTT 2820
consensus_787#1      ACTTCTTCCAGGCTCTCCTGTGGTCTACTGCAGTACTTGCCTTGATTCGTTTCATTGGAT 782
                      ******* **   ** **    ** ** **  * *****  * ** ** ***** ** *

consensus_787#0      GCCTGTGGTTCTTGGGTCGCAGTGGTATCTTCTTCTGCGTCCGCAAGAGATAAAGGCACT 2880
consensus_787#1      GTCTGTGGTTCCTTGGTCGCACTGGTCTCTTCTTCTGCGTGCGGAAGAGGTAAAG-TGGC 841
                     * ********* * ******* **** ************* ** ***** *****     

consensus_787#0      ATCGCCAAGCTTATGAACCCCACCCCGTTCCTTACAACGGCCTTGTTATACCACCATG-T 2939
consensus_787#1      GTATGCACTACTGCAACGTCCGCTTTTGTGTTTCTAAAGCCCTGCTTCGATTACCCTAAT 901
                      *   **    *   *   ** *     *  **  ** * ***  **  *  *** *  *

consensus_787#0      GTGATTTTTCCGAT-TCCCCTAATGTTTTTGTTCGCGCTTCCGGGTGCTGGCGTTTTGGC 2998
consensus_787#1      CAGATATAATTGGCGTTTCTTGGTGTCGTTGGGCTTGA--GCAGCAGCTAG-GAGCTGTG 958
                       *** *    *   *  * *  ***  ***  *  *    * *  *** * *   **  

consensus_787#0      ATATCCATTGGACTCCAGCCGGCTGGGTTGGCTCATCTTATCGGTAAAGAAAAAACTTGT 3058
consensus_787#1      GTTTTTGCTTGTTTCCGAAAAGAAAAAT--ATCACGCGCGCATGTCAGGCGTGGATTCAC 1016
                      * *    * *  ***     *     *        *      ** * *     * *   

consensus_787#0      CACGTCAGTTATGCTTGACTGGATCGCAAGGTCGGTTGGCATCCCCATTGTACTATTTGG 3118
consensus_787#1      CGCGTGATTCCTCGTCCGACGTGTCACAGATA----TGAAATGTT--TGGTTCCATTTGG 1070
                     * *** * *  *  *     *  ** **        **  **     * ** * ******

consensus_787#0      CTTCTGCAGGCGCCAATACTTTTGTTATTGGGGGAGATGAAAGCCGGCAAGAAGAACGGA 3178
consensus_787#1      AAAGGGGGAGCGGCAAAGACATCTATGCCCAATATTTTGTGTCATGG----GAGGCCTGC 1126
                          *   *** ***     *   *           **      **     **  * * 

consensus_787#0      AGCTTTATGATTGTG-ATACACGAGTCATCTCCGTGTTTTTTTTTGGACCATTGGAGTGC 3237
consensus_787#1      TGGCTTGCTTTTATGCACGCTAGAGATGTATGGGCTTTTTATATTCAGACTTTAGATTG- 1185
                      *  **    ** ** *  *  ***   * *  *  **** * **    * ** ** ** 

consensus_787#0      GATTTAGAATGAGCAATTCGAACACT 3263
consensus_787#1      GAAATACCACAAATATGTT------- 1204
                     **  **  *  *  *  *        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)