These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7874#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1972 fasta sequence [CTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACAAATCTAGGGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGTCGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACGGCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCGAGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGATGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATTGTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGTTGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGTACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGAAGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATGAAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATGTTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGTGGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTATATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGGGAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTGGTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATTCTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAAAGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTGGTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG-CCGCAAACC-TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGATTTGAACCTGAAAAGCTCTGTTTNGTTAAAAA] [+] EMBL AK102939 [CTAATTTCAAATCTCCCCCATTCGTTGCTTCTCCTCTCCGCTACCCCCGAACAAATCTAGGGTTTCGGATCGGAATCCTCCACCGCCGCCGGCGTTACTACCGGCGATAATGTCGGCCAGCGGCGAGCCCGAGAAGGTCCCCGCCGCCGCCGAGGGAGAGGAGAAGGCGGACGGCGCGAAGGATGCCGCGGGCTCCGGGGGAGAGCTGCTGTACTGCGGCGCGACCAACTTCGAGACCATGGGGCGGAAGGTGGTGGGCGGGGCGCAGGGTAACCTAGTGTCGCCGACGCGGATGCGGTCGCTCATGGGCGTCGACATACGATTCGTTGCCTCCGGGTGCACGGCTTGCCATTGTGTTGCCTTGGATGCTGAAGGACGTTGCTATACATGGGGTCGAAATGAGAAGGGGCAGTTGGGGCATGGGGATACTCTTCAGCGTAACCTGCCGACTGTTGTTTCTGAACTATCAAAGTACAAAGTCATTAAAGCAAGTGTTGGAAGAAATCACACAGTGGTTGTAACCGATGACGGGAAGTCATTCTCATTTGGTCACAATAAACACGGACAGTTGGGTACAGGCTCCCTAAGGAATGAAATTGAGACATCACCAATGCCCTGTCTTGTTACTGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGAACAAATCATACAGTTGCAGTTGATTCAAGTGGCTATGTTTACACATGGGGCTTTGGTGGATATGGAAGGTTGGGCCATAGAGAACAAAAGGATGAGTGGCAGCCTCGCCTTGTTGAAGTCTTCCAGAAGCATAATGTTCTGCCACCCAATGCTATTATATCAGCTGGTGCGGCAAGTTCTGCATGCACTGCCGGTGGAGGACAGTTGTACATGTGGGGAAAGTTAAAGAATACAGGCGACGACTGGATGTATCCAAAGCCATTATTGGATTTAAGTGGTTGGAACATTCGTTGCATGGCTTCTGGTAACATGCACCACGTTGTTGGTGCAGATGATTCTTGCATAAGCTGGGGAACAGCCCAAAATGGAGAGCTTGGCTATGGCCCTAATGGGCAAAAGTCATCTGCTAATCCTAAAAAGGTTGACATCCTTGAAGGAATGCATGTTATAAGTGTTGGTTGTGGATATGGGTTGTCTGCGATTGTTGTAGACAGATCAATTGCTAGTGACCGGCTTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTT CGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGA ] [+] EMBL AU030497 [ TGAAGCAACTAATGCTGTTTGTGGTGCTGATTTTACTGTCTGGCTGTCATCAGTGGAGGGCTCTACTATACTTACAGCAGGTCTTCCCCAGTACGGTCAGCTTGGTCATGGAACCGACAATGAGTACAATATTAAAGACTCATCTGTAAAGCTGGCATATGATCCCCAGCCCCGTCCCAGGGCAATAGCTTCATTATCTGGGAAAACTATCGTCAAAGCTGCATGTGGGACAAATCATACAGTTGCAG TGANTC AGTGGC ATGTTTACACNTGGGGtt ] [-] EMBL CB681581 [ TTAATCAGCTGGATATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATTTGCTAGCACCAATGCACGATTTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATTTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTTTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTTTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTTTTAGCAATGGTTTTTTACTTTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATAAAGGGCTTG ] [+] EMBL CB681580 [ CTGGACATTTATGACGGTGATACCTCCACTGAAGTAGAAGACAGAGTGGAGGTCCAGGTTGCCAAGAAGGCATCTGCTAGCACCAATGCACGATCTAACAAGCGCAAGAAAACCAAGGATGTTTCCGAATCAGAAGAGGATGATGATGAGGAAGATGATAGCGACGACGATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGG CCGCAAACC TTCAAACAGAGGGAGAGGCAGGGGAGCTAAAAAGGCAACTCCTGAGCCAAAGCCATCTGCAAGGGGCAGAGGCCGCCCGAAGAAAACCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGGCGAGGCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTT ] [+] EMBL AU030498 [ GATGAAAATGGTGAAATAAAAGGTGGTAAGGGTAGACGTGGCCCGCAAACCTTTCAAACAGAGGGAGAGNCAGGGGAGCTAAAAAGGCAACTCCTGANCCAAAGCCATCTGCAAGGGGCAGAGCCCNCCCGAAGAAANCCGAGTCTCCTGCTCAGAAAACTGGGAGCTTGGGNCGAGNCGGGAAGAGGGGGAAGCGAGGAAGAGCTCGGAAGTGAGTTTAAACCAAGTAGGGCATTGTTGAACTCAGATCGTGTGATTGTCTAACTCCTGATGCGATCCAACCCAGCCATTCAAGGGCATTTGTTTTCTTAGCAATGGTTTCTTACTCTTGCCCGCCTTACATTGTTGAGCCTGTTTTTTGAGTGGAATTACCTCTGGTATTGAAGACTTGTCTGATTTGAACCTGAAAAGCTCTGTTTNGTTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||