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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7885#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1665 fasta sequence
[CATCACTCCTGCAATTCACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGGCGTTGACCGCAGCCGCCGGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCGCGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCTCTTCTACCTCGGCGACCTCCACGCCGCGGCCAGCCCCCGTCCCGACGCGGCCGGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCGCGTGTTCTGCCCGCCCACGAACACGGCGGCGGTGAAGCTCCCGGTCGTCGTCTACTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTGCCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCCCGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGCCAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTTCCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGCGTCCACCACCTCGCCGTCGTCGTCGCTCCGGCTCGCCGGCGCCGTGCTGATATCGCCCTTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCGCTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGGGACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTGGCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCATGGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAGTTCGTCCAGGAGCATAGCTCCAACCGTATGGCTTAATTATATTTGTTCTTTTTTTAAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATAATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAATCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGACAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATGTATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAATTATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAGCTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGAAGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTGGAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATTCGT]
[+] EMBL AK109004 [CATCACTCCTGCAATTCACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGGCGTTGACCGCAGCCGCCGGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCGCGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCTCTTCTACCTCGGCGACCTCCACGCCGCGGCCAGCCCCCGTCCCGACGCGGCCGGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCGCGTGTTCTGCCCGCCCACGAACACGGCGGCGGTGAAGCTCCCGGTCGTCGTCTACTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTGCCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCCCGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGCCAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTTCCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGCGTCCACCACCTCGCCGTCGTCGTCGCTCCGGCTCGCCGGCGCCGTGCTGATATCGCCCTTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCGCTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGGGACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTGGCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCATGGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAGTTCGTCCAGGAGCATAGCTCCAACCGTATGGCTTAATTATATTTGTTCTTTTTTTAAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATAATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAATCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGACAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATGTATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAATTATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAGCTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGAAGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTGGAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATTCGT]
consensusID : consensus_7885#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1229 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTGATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK109437 [TTCCTCGAGCACTGTTGGCCTACTGGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTGATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK061012 [ GGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATGGAGCGCAACGCGCCGCCCAAATCGAATGCTTAATTAGAAGCGTTTTATTTACCTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTG ]
consensusID : consensus_7885#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1132 fasta sequence
[TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCTCTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGCCACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCGCGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGGCGGCGCCGATGCCGGTGATGGTGTACTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTGCCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGGGAACGGCATCCCGGGCCTCGACGGCGACGTCGTCCCCGTCGACCTCGCCAGCTGCTTCCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGCCACGTGGCAGCCCACGGCCAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCGTACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTGGTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTCGACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCATGGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTGTTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGATCTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTTCTGTGATTCAAGGTGAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGTTGAAAACTGTA]
[+] EMBL AK109637 [TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCTCTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGCCACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCGCGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGGCGGCGCCGATGCCGGTGATGGTGTACTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTGCCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGGGAACGGCATCCCGGGCCTCGACGGCGACGTCGTCCCCGTCGACCTCGCCAGCTGCTTCCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGCCACGTGGCAGCCCACGGCCAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCGTACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTGGTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCGCCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTCGACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCATGGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTGTTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGATCTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTTCTGTGATTCAAGGTGAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGTTGAAAACTGTA]
consensusID : consensus_7885#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1120 fasta sequence
[CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGAAATGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATG]
[-] EMBL AK111373 [CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGAAATGACTCGCACAGAAACCGGCGAAATGGGGCACGAGAAGGAGCAAGAAACGGCCGGCGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTTCGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCTCTTCTCCCTCGCAGACCGCCAGAGCGCCGCCGCGGCGCGCCCGGACGCCCACGGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCGCGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTACTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTGCCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCCCGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCACCGTCGGCCTCCCCGCCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTTCCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGCCGCCACCACCTCCTCGAGCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCGTTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTGGTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGCGACCACCCGGCGGCGCACGTCACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCGCCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCCGGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCACTCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCGTTCATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7885#1 ----------------------------------TTCCTCGAGCACTGTTGGCCTACTG- 25
consensus_7885#3 CCCTTTATTTCCAAAAAAAATTAATCGGTTCACCTATATATAGTGTCCTCTGGACACTGA 60
consensus_7885#0 -------------------------------------------CATCACTCCTGCAATT- 16
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ---GACTCGCACAGAAACCGGCGAAATGGG---GCACGAGAAGGAGCAAGAAACGGCCGG 79
consensus_7885#3 AATGACTCGCACAGAAACCGGCGAAATGGG---GCACGAGAAGGAGCAAGAAACGGCCGG 117
consensus_7885#0 ---CACTCAAAAAGAAAAAAAAAACTCTCCTCCACACTTGGTGCAGCAAGAGATGGCCGG 73
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 CGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTT 139
consensus_7885#3 CGACGAGCTCCGGCGGCCCGAGCCGCCGGCGTTGCCGTGGACGGTGCGGCTCCAGCTCTT 177
consensus_7885#0 CGTTGA-CCGCAGCCGCC--GGTCGTCGTCGTCGCCGCCGCCGCTTCCGTGGACGGTGCG 130
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 CGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCT 199
consensus_7885#3 CGCCCTCGTCACCGCCGTCGACATCGTGCAGCGCGGCGACGGCACCGTCAACCGCTTCCT 237
consensus_7885#0 CGTGCAGCTTGCTGCGCTCTCGGCCGCGCACCGGTCCGACGGCAGCGTGCGGCGCCTCCT 190
consensus_7885#2 -----TCTCGGCGGCGATCGACGCGGTGGAGCGGCGCGACGGGACGGTCAACCGCGCGCT 55
* ** ** * * * ** ****** * ** *** **
consensus_7885#1 CTTCTCC---CTCGCAGACCGCC------AGAGCGCCGCCGCGGCGCGCCCGGACGCCCA 250
consensus_7885#3 CTTCTCC---CTCGCAGACCGCC------AGAGCGCCGCCGCGGCGCGCCCGGACGCCCA 288
consensus_7885#0 CTTCTAC---CTCGGCGACCTCC------ACGCCGCGGCCAGCCCCCGTCCCGACGCGGC 241
consensus_7885#2 CTACTCCGTCCTCGTCGAACACCTGATGAGCGTCCGCGCCGACCCGTCCCCGGACGCCGC 115
** ** * **** ** * ** * *** * ** *****
consensus_7885#1 C------GGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCG 304
consensus_7885#3 C------GGCGTCCGCTCCGGCGATGTCACCGTCGACGCGTCCCGCGGGCTGTGGGCGCG 342
consensus_7885#0 C------GGCGTCCGCTCCGTCGACGTCACCATCGACGCCTCCCGCGGCCTCTGGGCGCG 295
consensus_7885#2 CACCGGCGCCGTCCGCTCCTTCGACTTCACCATCGACGCCGCGCGCGGCCTCTGGGCGCG 175
* * ********** *** ***** ******* * ***** ** ********
consensus_7885#1 CGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTA 364
consensus_7885#3 CGTGTTCTCCCCCGCGAGCAGCAGCGCCGTGGAATCCCCGCCGCTCCCCGTCGTCGTCTA 402
consensus_7885#0 CGTGTTCTGCCCGCCCACGAACACGGCGGCGG------TGAAGCTCCCGGTCGTCGTCTA 349
consensus_7885#2 CGTGTTCGCGCCCGCGGCGGCGGCGCAGGCGG---CGGCGCCGATGCCGGTGATGGTGTA 232
******* ** * * ** * * * ** ** * ** **
consensus_7885#1 CTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTG 424
consensus_7885#3 CTTCCACGGCGGCGGCTTCGCGCTCCTCACCGCCGCCTCCAGCCAGTACGACGCCTTGTG 462
consensus_7885#0 CTTCCACGGCGGCGGCTTCGTGCTCTTCTCCGCGGCGTCGCGCCCCTACGACGCGCTCTG 409
consensus_7885#2 CTACCACGGCGGCGGGTTCGCGCTGTTCTCGCCGGCGGTGGCGCCGTTCGACGGCGTGTG 292
** ************ **** *** ** * * ** * * ***** * **
consensus_7885#1 CCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCC 484
consensus_7885#3 CCGCCGGCTCTGCCGCGAGCTCCGCGCCGTCGTCGTCTCCGTCAACTACCGCCTCGCCCC 522
consensus_7885#0 CCGCCGCATCTCCCGCGGGGTCGGAGCCGTGGTGGTGTCCGTGAACTACCGCCTCGCCCC 469
consensus_7885#2 CCGCAGGCTGTGCGGCGACGTTGGCGTCGTCGTCGTCTCCGTCAACTACCGCCTCGCGCC 352
**** * * * * *** * * * *** ** ** ***** ************** **
consensus_7885#1 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCAC 544
consensus_7885#3 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGTGCTCCGCCACCTCGCCAC 582
consensus_7885#0 CGAGCACCGCTTCCCCGCCGCCTACGACGACGGCCTCGCCGCGCTCCGCTACCTCGACGC 529
consensus_7885#2 CGAGCACCGCTACCCCGCCGCCTACGACGACGGCGTGGACGCGCTCCGCTTCCTCGACGG 412
*********** ********************** * * ** ******* ***** *
consensus_7885#1 CGTCGGCCTCCCCG---CCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTT 601
consensus_7885#3 CGTCGGCCTCCCCG---CCGACGTAGTAGCGGCCGTCCCCGTCGACCTCACCCGCTGCTT 639
consensus_7885#0 CAACGGCCTCGCGGAGGCCGCCGCCGAGCTCGGCGCCGCCGTCGACCTCTCCCGCTGCTT 589
consensus_7885#2 GAACGGCATCCCGGGCCTCGACGGCGA---CGTCGTCCCCGTCGACCTCGCCAGCTGCTT 469
**** ** * * ** ** * * ** * *********** ** *******
consensus_7885#1 CCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGC 661
consensus_7885#3 CCTCGTCGGCGACAGCGCCGGCGGCAACATCGCCCACCACGTCGCGCACCGATGGGCCGC 699
consensus_7885#0 CCTCGCCGGCGACAGCGCGGGCGGGAACATCGTGCACCACGTGGCCCAGCGCTGGGCGGC 649
consensus_7885#2 CCTCGCCGGGGAGAGCGCCGGCGGCAACATCGTGCACCAAGTGGCCAACCGCTGGGCGGC 529
***** *** ** ***** ***** ******* ***** ** ** * ** ***** **
consensus_7885#1 CGC-CACCACCTCCTCGA-GCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCG 719
consensus_7885#3 CGC-CACCACCTCCTCGA-GCCGCCGCGTCCGCCTCGCCGGCGTCGTCCTGCTGCAGCCG 757
consensus_7885#0 GTC-CACCACCTCGCCGTCGTCGTCGC-TCCGGCTCGCCGGCGCCGTGCTGATATCGCCC 707
consensus_7885#2 CACGTGGCAGCCCACGGC--CAAGAACCTCCGCCTCGCTGGGATGATCCCCGTGCAGCCG 587
* ** * * * * **** ***** ** * * * ***
consensus_7885#1 TTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTG 779
consensus_7885#3 TTCTTCGGCGGCGAGGAGCGGACGGAGGCGGAGCTGAGGCTGGACGGCGTGGGGCCGGTG 817
consensus_7885#0 TTCTTCGGCGGCGAGGAGCGGACGGAGGAGGAGGTGGGGCTCGACAAGGCGAGCCTCTCG 767
consensus_7885#2 TACTTCGGCGGCGAGGAGAGGACGCCCTCCGAGCTGGCGCTCGACGGCGTGGCGCCGGTG 647
* **************** ***** *** ** *** *** * * * *
consensus_7885#1 GTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGGCGTTCCTGCCGGAGGGCGCCGACCGC 839
consensus_7885#3 GTGAGCATGGCGCGCGCGGACTGGTGCTGGAGGCCGTTCCTGCCGGAGGGCGCCGACCGC 877
consensus_7885#0 CTGTCGCTGGCGAGGACGGACTACTTCTGGCGGGAGTTCCTGCCGGAGGGCGCCACCCGG 827
consensus_7885#2 GTGAACCTCCGGCGGTCGGACTTCTCGTGGAAGGCGTTCCTGCCGGTGGGCGCCGACCGC 707
** * * * ****** * *** * *********** ******* ***
consensus_7885#1 GACCACCCGGCGGCGCACGT---CACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCG 896
consensus_7885#3 GACCACCCGGCGGCGCACGT---CACCGGCGAGAACGCCGAGCTGGCGGAGGAGTTCCCG 934
consensus_7885#0 GACCACGCGGCGGCGCGCGTGTGCGGCGGCGAGCGCGTCGAGCTGGCGGAGGCGTTCCCG 887
consensus_7885#2 GACCACCCGGCGGCGCACGT---CACCGACGAGAACGCCGAGCTGGCGGAGGCGTTCCCG 764
****** ********* *** * ** **** ** ************** *******
consensus_7885#1 CCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCC 956
consensus_7885#3 CCGGCGATGGTGGTGGTCGGAGGGTACGACACGCTGCAGGACTGGCAGCGGCGGTACGCC 994
consensus_7885#0 CCGGCGATGGTGGTGATCGGCGGGTTCGACCTGCTCAAGGGATGGCAGGCGAGGTACGTG 947
consensus_7885#2 CCGGCGATGGTGGTGATCGGAGGGTTCGACCCGCTGCAGGACTGGCAGCGGCGGTACGTC 824
*************** **** **** **** *** *** ****** * ******
consensus_7885#1 GGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCAC 1016
consensus_7885#3 GGGATGCTGCGGCGGAATGGGAAGGCGGTGCAGGTGGTGGAGTACCCGGCGGCGATCCAC 1054
consensus_7885#0 GCGGCGCTGCGCGAGAAGGGGAAGGCGGTGCGGGTGGTGGAGTACCCGGACGCCATCCAT 1007
consensus_7885#2 GACGTGCTGCGGCGGAAGGGGAAGGCGGTGGAGGTGGCGGAGTTCCCCGACGCCTTCCAT 884
* ****** *** ************ ***** ***** *** * ** ****
consensus_7885#1 TCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCG 1076
consensus_7885#3 TCCTTCTACGTCTTCCCGGAGCTCGCCGACTCCGGCGAGCTCGTCAAGGAGATGAAGGCG 1114
consensus_7885#0 GGCTTCCACGCGTTCCCGGAGCTCGCCGACTCCGGCAAGCTCGTGGAGGAGATGAAGCAG 1067
consensus_7885#2 GGCTTCTACGGCTTCCCGGAGCTCGCCGACGCCGGCAAGGTCTTGCAGGACATCAAGGTG 944
**** *** ****************** ***** ** ** * **** ** *** *
consensus_7885#1 TTCATGGAGCGCAACGCGCCGCCCAAATCGAATG-CTTAATT-AGAAGCGTTTTATTTAC 1134
consensus_7885#3 TTCATG------------------------------------------------------ 1120
consensus_7885#0 TTCGTCCAG----GAGCATAGCTCCAACCGTATGGCTTAATT-ATATTTGTTCTTTTTTT 1122
consensus_7885#2 TTCGTCCAGAGCAACAGGGCGGCGCGCGCCACCGCCTGAATTGAGATTCGAGAGTTTGAT 1004
*** *
consensus_7885#1 CTTTGGCATTTCAAAATGTTAACCTGGACTGCTATTTCATATATATTTTGCTGAAATTTG 1194
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 AAGTGTCCAATTGATCGAATCACACGCAGAATTCGACGCTATCATGCTGGCTTCTGCATA 1182
consensus_7885#2 CTGCTTCGTACCGTACACGCGTCGTACACTTCATATACTTGAGATTTTGAATTGGGATTT 1064
consensus_7885#1 ATCAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT------------------------- 1229
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 ATTTAGGAGAAAATTTTAAATATTTACAGATACATACCCCTCCGTCAAAAAAAAAAATAA 1242
consensus_7885#2 CTGTGATTCAAGGT---GAAAGTTTAAGGCCGCAGTTAAAAGTTTCGTATGATTTTATGT 1121
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 TCAATCCTACCTATAAACATGGATACATGCTTTAGGTTCGTAGGTAGGATTTTTTTTCGA 1302
consensus_7885#2 TGAAAACTGTA------------------------------------------------- 1132
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 CAGAGTAGTATGCAATAGACTTAAATAAACTAGCTAGTGGGGTTGTATGATTTCTGTATG 1362
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 TATCAAGTAATGAATCATGAGAGAGATACTACTCCTAGGGCCTGTTTGGGATCTTTAAAT 1422
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 TATAAGAAGCAGCTGTTTGGTAGCTAGTTTTTGATAATCTAGAAAAGCTCTGAAACCCAG 1482
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 CTTCTCCAGCTTCTGATTTTTTAGTTCATTTTTCAGAATTTGTAACTACAGATTCTCAGA 1542
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 AGTTGTGGACTGTTTGAGGCAACTTCTAGCAGAATCAGTTTTTAGGAAAAACTGCAGCTG 1602
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ------------------------------------------------------------
consensus_7885#3 ------------------------------------------------------------
consensus_7885#0 GAACAAGCTCCCCCAAAACAGGCCCTAGACTTTTTCCTTGTGAGTTGTGAGTTTCGTATT 1662
consensus_7885#2 ------------------------------------------------------------
consensus_7885#1 ---
consensus_7885#3 ---
consensus_7885#0 CGT 1665
consensus_7885#2 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||