These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7896#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1594 fasta sequence [GTGGTGGTGGTGGTGGGTGAGTGGAGCTCGCGGATCTCGCCATGGCGGGCGGCGGCGGCGGCGGAGGGTGGTGGTGGGTGGAGCGGTACGGGCCGTGCGTGGGGATGGTGATGGTGCAGTGGTTCTACGCGGCGGTGGACATGGCGCTCAAGGCGGCGTACGGGATGGGGATGCGCCCCATCGTCTTCGTCGCCTACCGCCAGGGGATCGCCGCCGCCACGCTCCTCCTCGCCTCGCTCGCCGCCAGGGGGTGGGACCTCCGCCGCCACATGGCCGTCGGCGCCCCGGCGTTCGCCCTCCTCTTCACCGCCTCCCTCGCCAGCGCGACGGGTCTGTACTTCTACTTCCTGGGGCTGCAGCTCGCGTCGCCGTCCATGGCCAGGGCCACCACCAACCTCGCCCCCGGCATTACCTTCGCCATCGCCGCCGTAATCGGGTTGGAGAAGGTGGATTTGAGGAGTTCGAGGAGCTTGGCCAAGATCGCCGGCACCGTCGTCTGCCTCGCCGGAGCGATGGCCATGGCGTTCTTCAAGGGGCCCAAGCTACTCGGCGCGGTTCTCGTCGCGGCGACCACCGATGATGACTGGGTGAAAGGAGGCATCTACCTCATCGGAAATGCTTTCTGCGTCTCCATTTGGTACATCTTGCAGGTGCCGGTTTGCAGATCGTACCTTGATCCACTGTCTCTGGCAACATGGATGTGCTTCTTAGCGACCTTGCAATGCGCCGTGATGGCATTCTTCCTAGAATCAAACTACTTACAGATTTGGAAACTAGCTTCGATTTGGGAGCTCCCCTGCATTTTATGTGGAGGTGTTTTTGCCTCTGGCGCAAACTTCTTTCTCCAATCCTGGTGCATATCAGTGAAAGGCCCCCTTTATAGCGCAATCTTTACACCACTGAGTGCTGTGATTACAACAATATTATCTACCATCTTCCTTCATGAGGAACTTCATATAGGAAGCATATTAGGTGCAATTGCAATCATCATTGGGTTGTACGTTGTGCTATGGGGCAAAGCAGATGATGCAAAGAGTGAGGGGCTGACCATCCTGTCAAATGATTCCAAAAGGATAACTGAACCTGAATGTACAGGCGTCAAAGTTGAATGTGGAACCAATCTTTCAGTACCACTGTTATCTGAGTCCTTGACCAGACTGAATGAACAAATGGATAATCTGGCAAAATGCTCAACATGATGCTTGACGAAGAATCGAAGATTGCTGGAGGTTGCTGTCAAAACTGATATAACCTTCCATGTAAAAGGAAAATACTGCCGTCAGCCTGTCACCGATAGAGCATTTCGTAGTTAAAACGGTCGAATTCCTTGTTCAGGCCTCCTTTTGAATCAGGGCTTTGTGGAGGAATTTTGTATGACTCAAATGCTATAAAAAATTTCCTATCATTGTACCCATCANAATCCTATGAAATTCTTTTGGAGTGGCTCACTGTATGGAGGTTTTGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] [+] EMBL CA755366 [GTGGTGGTGGTGGTGGGTGAGTGGAGCTCGCGGATCTCGCCATGGCGGGCGGCGGCGGCGGCGGAGGGTGGTGGTGGGTGGAGCGGTACGGGCCGTGCGTGGGGATGGTGATGGTGCAGTGGTTCTACGCGGCGCTGGACATGGCGCTCAAGGCGGCGTACGGGATGGGGATGCGCCCCATCGTCTTCGTCGCCTACCGCCAGGGGATCGCCGCCGCCACGCTCCTCCTCGCCTCGCTCGCCGCCAGGGGGTGTGACCTCCGCCGCCACATGGTCGTCGGCGCCCCGGAGTTCGCCCTCCTCTTCACCGCCTCCCTCGCCAGAGCGACGGGTCTGTACTTCTACTTCCTGGGGCTGCAACTCGCGTCGCCGTCCATGGTCACGGTCTCCACCGACCTCGCCC ] [+] EMBL AK073366 [ GTGAGTGGAGCTCGCGGATCTCGCCATGGCGGGCGGCGGCGGCGGCGGAGGGTGGTGGTGGGTGGAGCGGTACGGGCCGTGCGTGGGGATGGTGATGGTGCAGTGGTTCTACGCGGCGGTGGACATGGCGCTCAAGGCGGCGTACGGGATGGGGATGCGCCCCATCGTCTTCGTCGCCTACCGCCAGGGGATCGCCGCCGCCACGCTCCTCCTCGCCTCGCTCGCCGCCAGGGGGTGGGACCTCCGCCGCCACATGGCCGTCGGCGCCCCGGCGTTCGCCCTCCTCTTCGCCGCCTCCCTCGCCAGCGCGACGGGTCTGTACTTCTACTTCCTGGGGCTGCAGCTCGCGTCGCCGTCCATGGCCAGGGCCACCACCAACCTCGCCCCCGGCATTACCTTCGCCATCGCCGCCGTAATCGGGTTGGAGAAGGTGGATTTGAGGAGTTCGAGGAGCTTGGCCAAGATCGCCGGCACCGTCGTCTGCCTCGCCGGAGCGATGGCCATGGCGTTCTTCAAGGGGCCCAAGCTACTCGGCGCGGTTCTCGTCGCGGCGACCACCGATGATGACTGGGTGAAAGGAGGCATCTACCTCATCGGAAATGCTTTCTGCGTCTCCATTTGGTACATCTTGCAGGTGCCGGTTTGCAGATCGTACCTTGATCCACTGTCTCTGGCAACATGGATGTGCTTCTTAGCGACCTTGCAATGCGCCGTGATGGCATTCTTCCTAGAATCAAACTACTTACAGATTTGGAAACTAGCTTCGATTTGGGAGCTCCCCTGCATTTTATGTGGAGGTGTTTTTGCCTCTGGCGCAAACTTCTTTCTCCAATCCTGGTGCATATCAGTGAAAGGCCCCCTTTATAGCGCAATCTTTACACCACTGAGTGCTGTGATTACAACAATATTATCTACCATCTTCCTTCATGAGGAACTTCATATAGGAAGCATATTAGGTGCAATTGCAATCATCATTGGGTTGTACGTTGTGCTATGGGGCAAAGCAGATGATGCAAAGAGTGAGGGGCTGACCATCCTGTCAAATGATTCCAAAAGGATAACTGAACCTGAATGTACAGGCGTCAAAGTTGAATGTGGAACCAATCTTTCAGTACCACTGTTATCTGAGTCCTTAACCAGACTGAATGAACAAATGGATAATCTGGCAAAATGCTCAACATGATGCTTGACGAAGAATCGAAGATTGCTGGAGGTTGCTGTCAAAACTGATATAACCTTCCATGTAAAAGGAAAATACTGCCGTCAGCCTGTCACCGATAGAGCATTTCGTAGTTAAAACGGTCGAATTCCTTGTTCAGGCCTCCTTTTGAATCAGGGCTTTGTGGAGGAATTTTGTATGACTCAAATGCTATAAAAAATTTCCTA ] [+] EMBL CB660681 [ GCTCGCGGATCTCGCCATGGCGGGCGGCGGCGGCGGCGGAGGGTGGTGGTGGGTGGAGCGGTACGGGCCGTGCGTGGGGATGGTGATGGTGCAGTGGTTCTACGCGGCGGTGGACATGGCGCTCAAGGCGGCGTACGGGATGGGGATGCGCCCCATCGTCTTCGTCGCCTACCGCCAGGGGATCGCCGCCGCCACGCTCCTCCTCGCCTCGCTCGCCGCCAGGGGGTGGGACCTCCGCCGCCACATGGCCGTCGGCGCCCCGGCGTTCGCCCTCCTCTTCTCCGCCTCCCTCGCCAGCGCGACGGGTCTGTACTTCTACTTCCTGGGGCTGCAGCTCGCGTCGCCGTCCATGGCCAGGGCCACCACCAACCTCGCCCCCGGCATTACCTTCGCCATCGCCGCCGTAATCGGGTTGGATAATGTGGATTTGAGGATTTCCAGGAGCTTGGACAAGATCTCCTGTTCCG ] [-] EMBL CB660682 [ GGGTGAAAGGAGGCATCTACCTCATCGGAAATGCTTTCTGCGTCTCCATTTGGTACATCTTGCAGGTGCCGGTTTGCAGATCGTACCTTGATCCACTGTCTCTGGCAACATGGATGTGCTTCTTAGCGACCTTGCAATGCGCCGTGATGGCATTCTTCCTAGAATCAAACTACTTACAGATTTGGAAACTAGCTTCGATTTGGGAGCTCCCCTGCATTTTATATGGAGGTGTTTTTGCCTCTGGCGCAAACTTCTTTCTCCAATCCTGGTGCATATCAGTGAAAGGCCCCCTTTATAGCGCAATCTTTACACCACTGAGTGCTGTGATTACAACAATATTATCTACCATCTTCCTTCATGAGGAACTTCATATAGGAAGCATATTAGGTGCAATTGCAATCATCATTGGGTTGTACGTTGTGCTATGGGGCAAAGCAGATGATGCAAAGAGTGAGGGGCTGACCATCCTGTCAAATGATTCCAAAAGGATAACTGAACCTGAATGTACAGGCGTCAAAGTTGAATGTGGAACCAATCTTTCAGTACCACTGTTATCTGAGTCCTTGACCAGACTGAATGAACAAATGGATAATCTGGCAAAATGCTCAACATGATGCTTGACGAAGAATCGAAGATTGCTGGAGGTTGCTGTCAAAACTGATATAACCTTCCATGTAAAAGGAAAATACTGCCGTCAGCCTGTCACCGATAGAGCATTTCGTAGTTAAAACGGTCGAATTCCTTGTTCAGGCCTCCTTTTGAATCAGGGCTTTGTGGAGGAATTTTGTATGACTCAAATGCTATGAAAAATTTCCTATCATT ] [+] EMBL CA755481 [ CAATCATCATTGGGTTGTACGTTGTGCTATGGGGCAAAGCAGATGATGCAAAGAGTGAGGGGCTGACCATCCTGTCAAATGATTCCCAAAGGATAACTGAACCTGAATGTACAGGCGTCAAAGTTGAATGTGGAACCAATCTTTCAGTACCACTGTTATCTGAGTCCTTGACCAGACTGAATGAACAAATGGATAATCTGGCAAAATGCTCAACATGATGCTTGACGAAGAATCGAAGATTGCTGGAGGTTGCTGTCAAAACTGATATAACCTTCCATGTAAAAGGAAAATACTGCCGTCAGCCTGTCACCGATAGAGCATTTCGTAGTTAAAACGGTCGAATTCCTTGTTCAGGCCTCCTTTTGAATCAGGGCTTTGTGGAGGAATTTTGTATGACTCANATGCTATAANAAATTTCCTATCATTGTACCCATCANAATCCTATGAAATTCTTTTGGAGTGGCTCACTGTATGGAGGTTTTGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||