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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7906 cluster # 7906       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7906#0 length = 700 sequences # 5  

consensusID : consensus_7906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 700
fasta sequence
                              [TTTTTTTTTTTTTTCTCGGGTCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGTGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAAAAAAAATGGAAATGCTCTCAGGTGGTCGTACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAAAAGTCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGTGGAAAATTGGGGCCAGCTTCTTTCTTCGCAGTCTCTTTGTTTGGACTATCAGTTCTCTTCTGAACCAGAATGCTAA-GGTTATTGATTCGCTGTCCCATCCAATCTTTCTTTGGGGCAAAATCAGTAGAGTTAGAG-AGAGGCCTTGCAACTTTAACTCTTTCTTTTTCTGCTGAAGGGGCTGCAATGAAGACATCAAAAGTTCTTTGAGATGAACTGGTGATGTTGTCTCCACGTCGAATTGCTGTCCCATTTT]

[+] EMBL CA760451             [TTTTTTTTTTTTTTCTCGGGGCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGGGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAAAAAAAATGGAAATGCTCTCAGGGGGTCGAACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAAAAGCCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGGGGAAAATTGGGGCCAGCTTCTTTCTTCGCAGTCTCTTTGTTTGGACTATCAGTTCTCTTCTGAACCAGAATGCTAA GGTTATTGATTCGCTGTCCCATCCAATCTTTCTTTGGGGCAAAATCAGTAGAGTTAGAG AGAGGCCTTGCAACTTTAACTCTTTCTTTTTCTGCTGAAGGGGCTGCAATGAAGACATCAAAAGTTCTTTGAGATGAAC                                       ]
[+] EMBL CA760889             [TTTTTTTTTTTTTTCTCGGGGCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGGGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAAAAAAAATGGAAATGCTCTCAGGGGGTCGAACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAAAAGCCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGGGGAAAATTGGGGCCAGCTTCTTTCTTCGCAGTCTCTTTGTTTGGACTATCAGTTCTCTTCTGAACCAGAATGCTAA GGTTATTGATTCGCTGTCCCATCCAATCTTTCTTTGGGGCAAAATCAGTAGAGTTAGAG AGAGGCCTTGCAACTTTAACTCTTTCTTTTTCTGCTGAAGGGGCTGCAATGAAGACATCAAAAGTTCTTTGAGATGAAC                                       ]
[+] EMBL CA763377             [     TTTTTTTTTCTCGGGTCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGTGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAGAAGAAATGGAAATGCTCTCAGGTGGTCGTACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAGAAGTCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGTGGAGAATTGGTGCCAGCTTCTTTCTTCGCAGTCTCTTTGTTTGGACTATCAGTTCTCTTCTGAACCAGTATGCTAA TGTTATTGATTCGCTGTCCCATCCCATCTTTCTTTGGTGCAGAATCAGTAGAGTTAGAG AGAGGCCTTGCAACTTTAACTCTTTCTTTTTCTGCTGTAGGTGCTGCAATGAAGACATCAAAAGTTCTTTGAGATGAACTGGTGATGTTGTCTCCACGTCGAATTGCTGTCCCATTTT]
[-] EMBL AU174336             [         TTTTTCTCGTGTCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGTGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTANAANAAATGGAAATGCTCTCAGGTGGTCGTACAAGCCCATTTGGCCTTCGTATTGNAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTANAAGTCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGTGGA                                                                                                                                                                                                                                                            ]
[-] EMBL AU030436             [          TTTTCTCGTGTCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGTGCCCCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGAGGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGTTCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAGAAGAAATGGAAATGCTCTCAGGTGGTCGTACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTTGGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAGAAGTCGATGGACTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGCATGGTATTAGCAGGGCTTGGAAGCAGTGGAGAATTGGTGCCAGCTTNTTTCTTCGCAGTCTCTTTGNTTGGACTATNAGNTCTCTTCTGAACCAGTATGCTAATGGTTATTGATTCGCTGTCCCATCCCATCTTTCTTTGGTGCAGAATCAGTAGAGTTAGAGAAGANG CTTGCAACTTTAACTCTTTCTTTTTCTGCTGTAGGTGCTGCAATGAAGACATC                                                           ]


>consensus_7906#0 TTTTTTTTTTTTTTCTCGGGTCGATCACTCTTCTTATCCTCCTTTGCAACATCAGGTGCC CCATCTCTGACCTTCTCCATCCTTTCAGTTCTTCCATCTGTAATTTTCTCCATAGTTGGA GGTTTTGAATTAATCTGTTTTGGATCGATAATATTATTCTGCAATATCCTTCCACCCTGT TCCTTTTCCTTCCCCATAGCAGGGGAAGCACCTCCTGCATCAGGTTTCTTAAAAAAAATG GAAATGCTCTCAGGTGGTCGTACAAGCCCATTTGGCCTTCGTATTGTAATACTTGGGCTT GGGATAGATGACCTAGGCATTCCTCTATCTGTCCCTGCTGTTGCACTAAAAGTCGATGGA CTGTCAAACCTCTGTGTTGGAATCTCCATTGGCCGACCAACCTTACCATTTCCCTTATGC ATGGTATTAGCAGGGCTTGGAAGCAGTGGAAAATTGGGGCCAGCTTCTTTCTTCGCAGTC TCTTTGTTTGGACTATCAGTTCTCTTCTGAACCAGAATGCTAAGGTTATTGATTCGCTGT CCCATCCAATCTTTCTTTGGGGCAAAATCAGTAGAGTTAGAGAGAGGCCTTGCAACTTTA ACTCTTTCTTTTTCTGCTGAAGGGGCTGCAATGAAGACATCAAAAGTTCTTTGAGATGAA CTGGTGATGTTGTCTCCACGTCGAATTGCTGTCCCATTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)