These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7918#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3621 fasta sequence [GAAGCTGTTCCCACTTCCCACGGCAGCACAAGACAATGTGGGGCCTACTGAGGCGGCGAAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGAGGTCACCGCCGCCGTCGACGGTTCCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGACTGCATGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTGAGGGATGAGATAGTGAGACAGCTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTTGATGTCTTCTGTGAGGAGATTTGCGGAGAATTTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTGTAAGCAGATCTAATGTTTATGTATATTGGAAATATTTGGTAGAACAAAACATTATGCTTCCTCGCAAAAAGAAAAAAAAAACATTATGCTGTTTTACAGAATTATTGTAGCAGCAAAACCTTCTGCAACATAGAGAATTTGGGTGCTAAATAAACTGGAATGAGCATTTGAGCTGGCTATTGGGATTCAGACACTCAAAGCATGCTTAATAGACAGTATTTATGTATTACTGGGTTATGTCATTAGTACAGTCATTTTCTGGAAGATAAAACAGTCCATCAGACCTCTACTAAAAAACTTTTATTCCATCTATGTTGAAGTGTTCTTTTTTTACATTGCCTTTTTTTGGCGAGGAATACGTCATCCATTTTATGTTTGAGAAAATAGTTTTAGTCTTCTCTGTTTAAAGTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGTAGGCCCCCTCTTACAGTCCCTTAAACTGCATACTAAAACTTTTTTATTTTAAGTAGGTTTTGCCAAAATTCATAGAATATTATTGTTTTATTTTCTATTTGTTACTAAGACAGATGTACTTTACACATTTGTGTGTGGTCATATTTCACTTGACTGATCTTGTAACCATGTTTGGTTACAAACGTGCAAAATTTCTGTTATTATTGTGTAACTGCATCGTGCAATTAATCATGCAATGCAGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTAACAGCTACAAGCACCCTTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATCTGGGTATTACTTTCTGACCCAACGTATACTCCTTTTTACATTTGTTTACCTTTTCAATCGATCAAAGGTAAGAAAACAGATCTGCACAAAAACATCATATTCGAAATTAATTATTTTTATTCTCTCCCGCTAGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGTTCCACTTTTCTTCTTGTTTTCCTTTAAGCTCGTATTTGGAACAACTGGTGGTTCACACTAACTCTTGTTTATTTAATTGTACACACTGTTTGTCCTCAAAATTACACAATTTTGTAATCTTGTAAAATGGAAAAGAAATTGTAGTAGGCTATTTTTCTTGAAATTACTAACTGTAATATGTTAGACATGCTGTTAACTAAATCATGTAGATCTTTGGCTGAGACAGTAATATGAAGTTATCACAAAATAGATCTCATAATAGCAAAGCTATGCAGAGGATGGATGTCAAAGCCCTGTTATTTTTGTTATGGAGCTGTTCTGTGAATAGATGATATCAATGATCGCATTACTATTTCAAAAAGTTTCACATATTTTCTTGATGATGAATGTTTGTCTGCTAAAAGGAGCAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGGGCATATCTGACAAATGCATATAGTTCTTGGCAAAATAAAGCTAAATCAATCTTCATGGATGGTTCATCGAATCTCAGACAGTATTTGCTTTTATCTTTCTGGCTAGTTGAGTTTTTGCTTCGTTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCACATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTCTAGCCTATTAATCTGATTTACTTCTCTTCCAGTTGTATAAAGAGTTTTTCCAGAACTTTTTTGTTCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGTAAGTTTTGGATCATTTTTTTTCTGTTCCTTTCACAAGACTAAAGTGACAGAGTTGTATTTACTATTTTTACTGTATATTCAATTTAAGTATTTTATTGCGTATGCAATTTATGTCAATTTCATTACATATGTTCTTGTGACAGTTATATTCACTATCTTATTGTATATTCAATTTGTATTTTATTGTGTATGCAATTTATGTCTATTTCATTACATATGTTTTCTGAAACATTTTATTCAACAGAAACACACAAAATAATTCTAAAACTTCAATCCTAGTACTAGTGGTAAGTGTACATTCTAAAACTTTTTGACTGCTCCTAAATAATTGGATGTATCATGGAATAATTAACCTAATAAATATATAAATATGGAAAAAATGTATTTATTGCTTATATCATTCAACATCTTCCTGCAACCTGAAAAAACAGGAGCTGCAATATTACCATGACTCTACCAGGGCACTATTTTTTGTAGAGTTAATGTTATTAAATCCATGAACTAACTGGCACCAGGACAAAGTCTCCTTGAAATTTTACTAATTCAGTAATTCATAACATGTTTAATTGTGCAAACCATCCAATTACCAACAAACAATTGTGCAAACTATCCAAACACATAATCACTGCTTAGCATTGTTTGTTTTTGCAGGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAATAAATTGATTGGATGTACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGGTAATACATTGCAGT] [+] EMBL AK121726 [GAAGCTGTTCCCACTTCCCACGGCAGCACAAGACAATGTGGGGCCTACTGAGGCGGCGAAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGAGGTCACCGCCGCCGTCGACGGTTCCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGACTGCATGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTGAGGGATGAGATAGTGAGACAGCTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTTGATGTCTTCTGTGAGGAGATTTGCGGAGAATTTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTGTAAGCAGATCTAATGTTTATGTATATTGGAAATATTTGGTAGAACAAAACATTATGCTTCCTCGCAAAAAGAAAAAAAAAACATTATGCTGTTTTACAGAATTATTGTAGCAGCAAAACCTTCTGCAACATAGAGAATTTGGGTGCTAAATAAACTGGAATGAGCATTTGAGCTGGCTATTGGGATTCAGACACTCAAAGCATGCTTAATAGACAGTATTTATGTATTACTGGGTTATGTCATTAGTACAGTCATTTTCTGGAAGATAAAACAGTCCATCAGACCTCTACTAAAAAACTTTTATTCCATCTATGTTGAAGTGTTCTTTTTTTACATTGCCTTTTTTTGGCGAGGAATACGTCATCCATTTTATGTTTGAGAAAATAGTTTTAGTCTTCTCTGTTTAAAGTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGTAGGCCCCCTCTTACAGTCCCTTAAACTGCATACTAAAACTTTTTTATTTTAAGTAGGTTTTGCCAAAATTCATAGAATATTATTGTTTTATTTTCTATTTGTTACTAAGACAGATGTACTTTACACATTTGTGTGTGGTCATATTTCACTTGACTGATCTTGTAACCATGTTTGGTTACAAACGTGCAAAATTTCTGTTATTATTGTGTAACTGCATCGTGCAATTAATCATGCAATGCAGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTAACAGCTACAAGCACCCTTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATCTGGGTATTACTTTCTGACCCAACGTATACTCCTTTTTACATTTGTTTACCTTTTCAATCGATCAAAGGTAAGAAAACAGATCTGCACAAAAACATCATATTCGAAATTAATTATTTTTATTCTCTCCCGCTAGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGTTCCACTTTTCTTCTTGTTTTCCTTTAAGCTCGTATTTGGAACAACTGGTGGTTCACACTAACTCTTGTTTATTTAATTGTACACACTGTTTGTCCTCAAAATTACACAATTTTGTAATCTTGTAAAATGGAAAAGAAATTGTAGTAGGCTATTTTTCTTGAAATTACTAACTGTAATATGTTAGACATGCTGTTAACTAAATCATGTAGATCTTTGGCTGAGACAGTAATATGAAGTTATCACAAAATAGATCTCATAATAGCAAAGCTATGCAGAGGATGGATGTCAAAGCCCTGTTATTTTTGTTATGGAGCTGTTCTGTGAATAGATGATATCAATGATCGCATTACTATTTCAAAAAGTTTCACATATTTTCTTGATGATGAATGTTTGTCTGCTAAAAGGAGCAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGGGCATATCTGACAAATGCATATAGTTCTTGGCAAAATAAAGCTAAATCAATCTTCATGGATGGTTCATCGAATCTCAGACAGTATTTGCTTTTATCTTTCTGGCTAGTTGAGTTTTTGCTTCGTTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCACATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTCTAGCCTATTAATCTGATTTACTTCTCTTCCAGTTGTATAAAGAGTTTTTCCAGAACTTTTTTGTTCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGTAAGTTTTGGATCATTTTTTTTCTGTTCCTTTCACAAGACTAAAGTGACAGAGTTGTATTTACTATTTTTACTGTATATTCAATTTAAGTATTTTATTGCGTATGCAATTTATGTCAATTTCATTACATATGTTCTTGTGACAGTTATATTCACTATCTTATTGTATATTCAATTTGTATTTTATTGTGTATGCAATTTATGTCTATTTCATTACATATGTTTTCTGAAACATTTTATTCAACAGAAACACACAAAATAATTCTAAAACTTCAATCCTAGTACTAGTGGTAAGTGTACATTCTAAAACTTTTTGACTGCTCCTAAATAATTGGATGTATCATGGAATAATTAACCTAATAAATATATAAATATGGAAAAAATGTATTTATTGCTTATATCATTCAACATCTTCCTGCAACCTGAAAAAACAGGAGCTGCAATATTACCATGACTCTACCAGGGCACTATTTTTTGTAGAGTTAATGTTATTAAATCCATGAACTAACTGGCACCAGGACAAAGTCTCCTTGAAATTTTACTAATTCAGTAATTCATAACATGTTTAATTGTGCAAACCATCCAATTACCAACAAACAATTGTGCAAACTATCCAAACACATAATCACTGCTTAGCATTGTTTGTTTTTGCAGGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAATAAATTGATTGGATGTACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGGTAATACATTGCAGT] consensusID : consensus_7918#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1267 fasta sequence [AAGCTGTTCCCACTTCCCACGGCAGCACAAGACAATGTGGGGCCTACTGAGGCGGCGAAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGAGGTCACCGCCGCCGTCGACGGTTCCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGACTGCATGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTGAGGGATGAGATAGTGAGACAGCTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTTGATGTCTTCTGTGAGGAGATTTGCGGAGAATTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTAACAGCTACAAGCACCCTTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATCTGGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGAGCAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAATAAATTGATTGGATGTACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGGTAATACATTGCAGT] [+] EMBL AK063968 [AAGCTGTTCCCACTTCCCACGGCAGCACAAGACAATGTGGGGCCTACTGAGGCGGCGAAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGAGGTCACCGCCGCCGTCGACGGTTCCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAGTTCTCGCGATGCGGGGACTGCATGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTGAGGGATGAGATAGTGAGACAGCTTCCGGCTGCAAAGATTGAGATGCTGGATCTTGACCTCAGCTTGATGTCTTCTGTGAGGAGATTTGCGGAGAATTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAACAAATCACCTTGGGCATTTTCTACTGACCGATCTTTTACTTGAGAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTAACAGCTACAAGCACCCTTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATCTGGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATACTGCATTCCAATTTACTATCTAGCAATCTGAAGGAGCAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGAGCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAATAAATTGATTGGATGTACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGGTAATACATTGCAGT] consensusID : consensus_7918#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 920 fasta sequence [CATGGCTGGTTCATCGAATCTCAGACAGTATTTGCTTTTATCTTTCTGGCTAGTTGAGTTTTTGCTTCGTTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCACATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTCTAGCCTATTAATCTGATTTACTTCTCTTCCAGTTGTATAAAGAGTTTTTCCAGAACTTTTTTGTTCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAACCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAAAGAATTGATTGGATGTACTTCTTCAAAAAAAAAAACAAAAAGG] [+] EMBL CB681671 [CATGGCTGGTTCATCGAATCTCAGACAGTATTTGCTTTTATCTTTCTGGCTAGTTGAGTTTTTGCTTCGTTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCACATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTCTAGCCTATTAATCTGATTTACTTCTCTTCCAGTTGTATAAAGAGTTTTTCCAGAACTTTTTTGTTCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAACCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAG ] [-] EMBL CB681672 [ TAAAGAGTTTTTCCAGAACTTTTTTGTTCATTAAAGTGCATGATCATTCCATATACAAAAAATTCTTGAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGTGCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAACAATGCACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGTAAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAACCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAAAGAATTGATTGGATGTACTTCTTCAAAAAAAAAAACAAAAAGG] [+] EMBL BM419141 [ ccgGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATCTCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCATTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAAGTTAGGGCACTGAAGTGNGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATGGAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAACTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGCATNNATTGATTGGATGTACTTCTTCAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7918#0 GAAGCTGTTCCCACTTCCCACGGCAGCACAAGACAATGTGGGGCCTACTGAGGCGGCGAA 60 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGAGGTCACCGCCGCCGTCGACGGTT 120 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 CCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGGGATTGGTGCTGAAACATGCCGAG 180 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTCTCGCGATGCGGGGACTGCATGTTGTGATGGGGGTAAGGAACTCATCTGCCGGTGCGC 240 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GTGTGAGGGATGAGATAGTGAGACAGCTTCCGGCTGCAAAGATTGAGATGCTGGATCTTG 300 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ACCTCAGCTTGATGTCTTCTGTGAGGAGATTTGCGGAGAATTTCAATGCTCTGAATCTTC 360 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 CTCTGAACATCCTGGTGTAAGCAGATCTAATGTTTATGTATATTGGAAATATTTGGTAGA 420 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ACAAAACATTATGCTTCCTCGCAAAAAGAAAAAAAAAACATTATGCTGTTTTACAGAATT 480 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ATTGTAGCAGCAAAACCTTCTGCAACATAGAGAATTTGGGTGCTAAATAAACTGGAATGA 540 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GCATTTGAGCTGGCTATTGGGATTCAGACACTCAAAGCATGCTTAATAGACAGTATTTAT 600 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GTATTACTGGGTTATGTCATTAGTACAGTCATTTTCTGGAAGATAAAACAGTCCATCAGA 660 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 CCTCTACTAAAAAACTTTTATTCCATCTATGTTGAAGTGTTCTTTTTTTACATTGCCTTT 720 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTTTGGCGAGGAATACGTCATCCATTTTATGTTTGAGAAAATAGTTTTAGTCTTCTCTGT 780 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTAAAGTAATAATGCAGGGATTGCGTTTGTACCATTTAAGCTATCAGAGGAGGGCATTGA 840 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GCTGCATTTTTCAACAAATCACCTTGGTAGGCCCCCTCTTACAGTCCCTTAAACTGCATA 900 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 CTAAAACTTTTTTATTTTAAGTAGGTTTTGCCAAAATTCATAGAATATTATTGTTTTATT 960 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTCTATTTGTTACTAAGACAGATGTACTTTACACATTTGTGTGTGGTCATATTTCACTTG 1020 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ACTGATCTTGTAACCATGTTTGGTTACAAACGTGCAAAATTTCTGTTATTATTGTGTAAC 1080 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TGCATCGTGCAATTAATCATGCAATGCAGGGCATTTTCTACTGACCGATCTTTTACTTGA 1140 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GAAGATGAAAGTTACAGCTATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTC 1200 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TAACAGCTACAAGCACCCTTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATC 1260 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TGGGTATTACTTTCTGACCCAACGTATACTCCTTTTTACATTTGTTTACCTTTTCAATCG 1320 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ATCAAAGGTAAGAAAACAGATCTGCACAAAAACATCATATTCGAAATTAATTATTTTTAT 1380 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TCTCTCCCGCTAGGTATAACAAAATCTTCGCTTACGGCCAATCCAAGCTTGCCAACATAC 1440 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TGCATTCCAATTTACTATCTAGCAATCTGAAGGTTCCACTTTTCTTCTTGTTTTCCTTTA 1500 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 AGCTCGTATTTGGAACAACTGGTGGTTCACACTAACTCTTGTTTATTTAATTGTACACAC 1560 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TGTTTGTCCTCAAAATTACACAATTTTGTAATCTTGTAAAATGGAAAAGAAATTGTAGTA 1620 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GGCTATTTTTCTTGAAATTACTAACTGTAATATGTTAGACATGCTGTTAACTAAATCATG 1680 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TAGATCTTTGGCTGAGACAGTAATATGAAGTTATCACAAAATAGATCTCATAATAGCAAA 1740 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------AAGCTGTTCCCACTTCCCACGGCAGCACAAGACAAT 36 consensus_7918#0 GCTATGCAGAGGATGGATGTCAAAGCCCTGTTATTTTTGTTATGGAGCTGTTCTGTGAAT 1800 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 GTGGGGCCTACTGAGGCGGCGAAGCCCCTCCGGGTTCTCGCCGTCGTCCACCGCGGAGGA 96 consensus_7918#0 AGATGATATCAATGATCGCATTACTATTTCAAAAAGTTTCACATATTTTCTTGATGATGA 1860 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 GGTCACCGCCGCCGTCGACGGTTCCGGCCTCGTCGCCGTCGTAACCGGTGCCTCCAGTGG 156 consensus_7918#0 ATGTTTGTCTGCTAAAAGGAGCAAGATGCAAAAGTAACAGTCAACTCTCTGCATCCTGGA 1920 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 G-ATTGGT--GCTGAAACATGCCGAGTTCTCGCGATGCGGGGA---CTGCATGTTGTGAT 210 consensus_7918#0 GCTGTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGGGCATATCTGAC 1980 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 GGGGGTAAGGAACTCATCTGCCGGTGCGCGTGTGAGGGATGAGATAGTGAGACAGCTTCC 270 consensus_7918#0 AAATGCATATAGTTCTTGGCAAAATAAAGCTAAATCAATCTTCATGGATGGTTCATCGAA 2040 consensus_7918#2 ------------------------------------------CATGGCTGGTTCATCGAA 18 consensus_7918#1 GGCTGCAAAGATTGAGATGCTGGATC---TTGACCTCAGCTTGATGTCTTCTGTGAGGAG 327 *** * * ** consensus_7918#0 TCTCAGACAGTATT---TGCTTTTA---TCTTTCTGGCTAGTTGAGTTTTTGCTTCG--- 2091 consensus_7918#2 TCTCAGACAGTATT---TGCTTTTA---TCTTTCTGGCTAGTTGAGTTTTTGCTTCG--- 69 consensus_7918#1 ATTTGCGGAGAATTCAATGCTCTGAATCTTCCTCTGAACATCCTGGTTAATAATGCAGGG 387 * ** *** **** * * * **** * *** * * * consensus_7918#0 -TTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCAC 2150 consensus_7918#2 -TTGTGCTCATATTCATCTATAGTACAGCTATGAGACATCCATTTCTTCTATGTAGTCAC 128 consensus_7918#1 ATTGCGTTTGTAC-CATTTAAGCTATCAGAGGAGGGCATTGAGCTGCATTTTTCAA-CAA 445 *** * * ** *** ** ** * *** * * * * * ** consensus_7918#0 ATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTC 2210 consensus_7918#2 ATAAGTTTAGGCTTCAGTTGCCATCACTATTATCTTAATTGCATGGATACATCTTCTTTC 188 consensus_7918#1 ATCACCTTGGGCATTTTCTACTG--ACCGATCTTTTACTTGAGAAGATGAAAGTTACAGC 503 ** * ** *** * * * ** * * *** *** *** * ** * consensus_7918#0 TA---------GCCTATTAATCTGATTTACT----TCTCTTCCAGTTG-TATAAAGAGTT 2256 consensus_7918#2 TA---------GCCTATTAATCTGATTTACT----TCTCTTCCAGTTG-TATAAAGAGTT 234 consensus_7918#1 TATAGAAAGTGGGATAGAAGGAAGGGTTGTGATAGTTGCTTCTAACAGCTACAAGCACCC 563 ** * ** * * ** * **** * * ** ** * consensus_7918#0 TT-TCCAGAACTTTTTTGTTC-ATTAAAGTGCATGATCATTCCATATACAAAAAATTCTT 2314 consensus_7918#2 TT-TCCAGAACTTTTTTGTTC-ATTAAAGTGCATGATCATTCCATATACAAAAAATTCTT 292 consensus_7918#1 TTATCGAGAGGGGATTCGTTTTGATAAGATCAATGATGAATCTGGGTATAACAAAATCTT 623 ** ** *** ** *** *** * ***** * ** ** ** *** **** consensus_7918#0 GAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGT 2374 consensus_7918#2 GAGAGCATTACCTTATTAAAGAAATATTTCATTCATCGAAGATCACTATGGTTGTCCAGT 352 consensus_7918#1 C-GCTTACGGCCA-ATCCAAGC--TTGCCAACATACTGCATTCCAATTTA-CTATCTA-- 676 * * ** ** *** * * * * * ** * * * ** * consensus_7918#0 GCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAAC 2434 consensus_7918#2 GCAAATTGTAAAAGCCCCACATTTGTGCTTTATTATTTGAATGAATAATGAACTGGAAAC 412 consensus_7918#1 GCAATCTGAAGGAGCAAGATGCAAAAG---TAACAGTCAACTCTCTG-CATCCTGGAGCT 732 **** ** * *** * * ** * * * * * ***** consensus_7918#0 AATG-CACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGT 2493 consensus_7918#2 AATG-CACAGTGATTGTTCTTCCTTGTTTTTTAATTTCAGGTATGCTATCTACACTTGGT 471 consensus_7918#1 GTTGTCACCAACATTATGCGTCACTGGTATTTCGTAAATGGTATGCTATCTACACTTGGT 792 ** *** *** * * ** ** * *** * ********************* consensus_7918#0 AAATTTTTCGTTAAAGGTGTTGAACAAGTAAGTTTTGGATCATTTTTTTTC-TGTTCCTT 2552 consensus_7918#2 AAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAACCACAGTGTGCTATGTGGCATTGCAT 531 consensus_7918#1 AAATTTTTCGTTAAAGGTGTTGAACAAGGTGCAGCCACAGTGTGCTATGTGGCATTGCAT 852 **************************** * * * * * ** * * consensus_7918#0 TCACAAG--ACTAAAGTGACAGAGTTGTA-TTTACTATTTTTACTGTATATTCAATTTAA 2609 consensus_7918#2 CCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGT-CACTGAATTAAA 590 consensus_7918#1 CCTCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGT-CACTGAATTAAA 911 * ** * ** *** ** * ** *** * * * *** * * **** ** consensus_7918#0 GTATTTTATTGCGTATGCAATTTATGTCAATTTCATTACATATGTTCTTGTGACAGTTAT 2669 consensus_7918#2 ATCTCATGCGCTCGACATGGGCCTCGCCAAAAG-ATTGTG-GGATTTCAGTCTCAACCTA 648 consensus_7918#1 ATCTCATGCGCTCGACATGGGCCTCGCCAAAAG-ATTGTG-GGATTTCAGTCTCAACCTA 969 * * * * * *** *** ** ** ** consensus_7918#0 ATTCACTATCTTATTGTATATTCAATTTGTATTTTATTGTGTATGCAATTTATGTCTATT 2729 consensus_7918#2 ATCCATTAGTAGAAACTGT-TGCAAGTGGTGTGTAAA-GCCTATTTTTTGGAAACGAACT 706 consensus_7918#1 ATCCATTAGTAGAAACTGT-TGCAAGTGGTGTGTAAA-GCCTATTTTTTGGAAACGAACT 1027 ** ** ** * * * * *** * ** * * * * *** * * * * consensus_7918#0 TCATTACATATGTTTTCTGAAACATTTTATTCAACAGAAACACACAAAATAATTCTAAAA 2789 consensus_7918#2 GAATCAAGTTAGGGCACTGAAGTGTGTGAAG-AACATGA-TAAAAGTATTTCTACAAAAA 764 consensus_7918#1 GAATCAAGTTAGGGCACTGAAGTGTGTGAAG-AACATGA-TAAAAGTATTTCTACAAAAA 1085 ** * * * ***** * * * **** * * * * * * * **** consensus_7918#0 CTTCAATCCTAGTACTAGTGGTAAGTGTACATTCTAAAACTTTTTGACTGCTCCTAAATA 2849 consensus_7918#2 TTGCGAATGGAGGACATGTTGTTAA--TAGATGTGAAATTTATCCAGTTGTTCGGTAGGT 822 consensus_7918#1 TTGCGAATGGAGGACATGTTGTTAA--TAGATGTGAAATTTATCCAGTTGTTCGGTAGGT 1143 * * * ** ** ** ** * ** ** *** * * ** ** * consensus_7918#0 ATTGGATGTATCATGGAATAATTAACCTAATAAATATATAAATATGGAAAAAATGTATTT 2909 consensus_7918#2 GTGATATCAAACTGCTGGAAGACAGCCCG--AACCAGCCACATTTGTAAAGCTTGAAAGA 880 consensus_7918#1 GTGATATCAAACTGCTGGAAGACAGCCCG--AACCAGCCACATTTGTAAAGCTTGAATAA 1201 * ** * * * * ** ** * * ** ** *** ** * consensus_7918#0 ATTGCTTATATCATTCAACATCTTCCTGCA-ACCTGAAAAAACAGGAGCTGCAATATTAC 2968 consensus_7918#2 ATTG--------ATTGGATGTACTTCTTCA-AAAAAAAAAACAAAAAGG----------- 920 consensus_7918#1 ATTG--------ATTGGATGTACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGG 1253 **** *** * * * ** ** * * consensus_7918#0 CATGACTCTACCAGGGCACTATTTTTTGTAGAGTTAATGTTATTAAATCCATGAACTAAC 3028 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 TAATACATTGCAGT---------------------------------------------- 1267 consensus_7918#0 TGGCACCAGGACAAAGTCTCCTTGAAATTTTACTAATTCAGTAATTCATAACATGTTTAA 3088 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTGTGCAAACCATCCAATTACCAACAAACAATTGTGCAAACTATCCAAACACATAATCAC 3148 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TGCTTAGCATTGTTTGTTTTTGCAGGGTGCAGCCACAGTGTGCTATGTGGCATTGCATCC 3208 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TCAGGTTGCTGGAGTCACTGGCAAATACTTTGTTGACTGCAATGTCACTGAATTAAAATC 3268 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TCATGCGCTCGACATGGGCCTCGCCAAAAGATTGTGGGATTTCAGTCTCAACCTAATCCA 3328 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 TTAGTAGAAACTGTTGCAAGTGGTGTGTAAAGCCTATTTTTTGGAAACGAACTGAATCAA 3388 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GTTAGGGCACTGAAGTGTGTGAAGAACATGATAAAAGTATTTCTACAAAAATTGCGAATG 3448 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 GAGGACATGTTGTTAATAGATGTGAAATTTATCCAGTTGTTCGGTAGGTGTGATATCAAA 3508 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 CTGCTGGAAGACAGCCCGAACCAGCCACATTTGTAAAGCTTGAATAAATTGATTGGATGT 3568 consensus_7918#2 ------------------------------------------------------------ consensus_7918#1 ------------------------------------------------------------ consensus_7918#0 ACTTCTTCATATGTTTGTACTTCTTCACAGCGTTTGTGGTAATACATTGCAGT 3621 consensus_7918#2 ----------------------------------------------------- consensus_7918#1 ----------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||