cluster # 7940

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Oryza sativa
cluster # 7940 cluster # 7940 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7940#0 length = 1006 sequences # 5
consensusID : consensus_7940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1006
fasta sequence
                              [CCCAAGTCCAACCAAGAGTGGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA-GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA-CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTTATAAGAAAATAACG]

[+] EMBL AK070044             [CCCAAGTCCAACCAAGAGTGGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAAT                      ]
[+] EMBL AK058897             [                            ACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTTATAAGAAAATAACG]
[+] EMBL CF303273             [                                          AAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTATTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTATGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI805532             [                                                                                                                                                                                                                                                                                                                                                                   GTTTC TGATCGTCTAAATTTACCATGGAAGATAATCTTCCCA CCCCAA CCTTAAGGGAGAACTCTAATGC AACATCGCAA  CAGAGGCTTAAGATGATACTGTTCTCC ACAGGTGTGAAGTGAGTGACGA GCCAAGAAGAAGATTGTTGAGAACATCGTTGA GCACTCTCTGAATTCGTGGAGATAGAATCACGAGAC ACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACACCTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCCAC AGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTC ATTTGTTGAAGGCTTTCTTCGC ATCTTGGTTAGTCTAATGTACATATCTAGGCTTTAGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGC AATATCAGTACCGTGGGGTTAGTCC ACTTGGATTTTCCGAAGAAATGTTTATTTATA           ]
[+] EMBL CA767352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATCCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCCGCGTCGATGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTT              ]




>consensus_7940#0
CCCAAGTCCAACCAAGAGTGGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGG
CAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGT
CCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGT
TTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCA
TTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACT
TCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTC
TTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAAGGAGAACT
CTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAG
TGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCG
TGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCA
CAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAG
AGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACACTGGAGAAACATCAGGCA
GCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCC
CTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTT
CTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCA
TGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGT
CCAACTTGGATTTTCCGAAGAAATGTTTATTTATAAGAAAATAACG
clustalw multiple alignements is not computed in this case