These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7940#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1006 fasta sequence [CCCAAGTCCAACCAAGAGTGGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA-GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA-CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTTATAAGAAAATAACG] [+] EMBL AK070044 [CCCAAGTCCAACCAAGAGTGGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAAT ] [+] EMBL AK058897 [ ACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAA GGAGAACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTTATAAGAAAATAACG] [+] EMBL CF303273 [ AAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTATTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTATGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGG ] [+] EMBL BI805532 [ GTTTC TGATCGTCTAAATTTACCATGGAAGATAATCTTCCCA CCCCAA CCTTAAGGGAGAACTCTAATGC AACATCGCAA CAGAGGCTTAAGATGATACTGTTCTCC ACAGGTGTGAAGTGAGTGACGA GCCAAGAAGAAGATTGTTGAGAACATCGTTGA GCACTCTCTGAATTCGTGGAGATAGAATCACGAGAC ACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACACCTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCCAC AGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTC ATTTGTTGAAGGCTTTCTTCGC ATCTTGGTTAGTCTAATGTACATATCTAGGCTTTAGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGC AATATCAGTACCGTGGGGTTAGTCC ACTTGGATTTTCCGAAGAAATGTTTATTTATA ] [+] EMBL CA767352 [ TTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATCCTGGCCTTGGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACA CTGGAGAAACATCAGGCCGCGTCGATGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCCCAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGTCTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATTTTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAAGAAATGTTTATTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||