These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7953#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 648 fasta sequence [CTAGGGTTTGTTCGTTGCTGCGTGCTGTGCTGTGCTTCGTCGGCGGTTGGCGNCGAGGAAGATGTCGAAGAAGAACAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG-G-AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC-TGGTCAAGTGACCATATTCCATCTAGCCTTGG-AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTT-TAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA] [+] EMBL AK121390 [CTAGGGTTTGTTCGTTGCTGCGTGCTGTGCTGTGCTTCGTCGGCGGTTGGCGGCGAGGAAGATGTCGAAGAAGAACAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGT ] [+] EMBL C27813 [ GNAGNGNAAGATGTCGAAGAAGAACAACCTCGCCAAGCGANAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAA NATGNG AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTCTTGGTCAAGTGACCATATTCCATCTAGCCTTCG AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTT TAG ] [+] EMBL AU100878 [ gccaAGGAAGATGTCGAAGAAGANCAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGNCAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGACCATATTCCATCTAGCCTTGGCAGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTTGTAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA] [+] EMBL AU160993 [ cnAGGAAGATGTCGAAGAAGANCAACCTCGCCAAGCGGAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTNATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCGCAAGCAATG G AGGTCGACAAGTAACTGGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGACCATATTCCATCTAGCCTTGGCAGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACGTTGGTTTGTAGAGTACCTTTGTAGTGGCAGAGCCTGGAATTAACATCTCGAACACTTTTAAAATATTAAAGTGAGATCGTTGCATTTGGAAGTAGATTTTTTGCTATTTCATGCTATTTGGATGAAACAACTACATCTGCAGCAAACTTGGCACATGTGTGAAAAA] [+] EMBL C27812 [ nanggnAAGATGTCGAAGAAGAACAACCTCGCCAAGC GAAGAAGCAGCACGAGTTCGACCTCCAAAGGGAAAAGGAGGCGAAGGAGAAACTGGCCAAGAAGCTGCAGGCCAAGAAATCCAAGATGAAGATAGATGGTGATGTGAAAAGGAAGGGTGGCAAATTTAAGGTTGGCAAGAAAAAGGTGAAGACAAAACTTTCAGCCTTAACAAAAGCCAAAGCTGCG AA NATNG GAAGGTCGACAAGTAACTTGGGAGTTTTACTTCCTACAATCTGTGTTCCATTGCTAAACTGTGCTCCAGTGTTGATATAGTTTTGATGGAAGAGAACAAGTTCTATGCTCAGATGAGTGCATTTGCTC TGGTCAAGTGA CATATTCCATCTAGCCTTGG AGTCTACTCAGTTGGAGCTTGTTACTCTTTTCTATACCTTGGTTT TAGg ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||