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Oryza sativa
cluster # 7976 cluster # 7976       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7976#0 length = 883 sequences # 5  

consensusID : consensus_7976#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 883
fasta sequence
                              [AAAGAGAATCTCCTTGTAGTTTCTTGTTGTGTGCAAGAAGTAAGAGAGGAATTAGCTTGGTAGCCATGACAAAGACGCAGCCGCAACTAGTGGAGTCGGAGCCGGTGAAGAAGCTCCAACGCTTGCCACCAGTGTTTAGTCGTGTGTTGGAGCTTCCATTCCCAAGGGATACCAATGTTCGTAAGCTCTTTACCACCAACGCTGACCTCTTTTTTGTGCCACATGGTGTCGGTGGTGAACCTGATGTTGTTAAGGTACACATTGTGAGACTCGAGCGCTGGGATATGACTAGGGTGGTGGTGCACATTGGACCTGGGGAGCCAGACTTAAGGAATGATCTAGTCTATGACAAGTGGCGCTTCCCCCTAGCTGAGACATCCATTCTATCGATGGTTAT-GCAGGGTATGTGAATGGTCAACTCATTGTGGTTGTGCCCAGGATGGATGCAA-CGGTGATGGTGGGAATGAGGGGATCCCAATGTGGCCCAACATTGATAAAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCGGATTCGGGCTTCTTGCTGGTGCAAGCTACATTCCTACCAAGTAGCACC-ATCATTAGTGGTAACGGTGCAACTACTATAGTATACTAGTAGAGTTTTGCCAATAAGGTCTTCCACCAAATCCATCTT-TATGCCCAAACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCCTC-TTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCC-AAAGATCTATGCTTGGTCCAGTCAGTGTCATTGTAAC-ATCAGTTGGTA-CCATGGGCAAGCAATGTGTAACAAAAATAATAATATAAGTTTGCAAAAACGAGCGTAAAAA]

[+] EMBL AU174461             [AAAGAGAATCTCCTTGTAGTTTCTTGTTGTGTGCAAGAAGTAAGAGAGGAATTAGCTTGGTAGCCATGACAAAGACGCAGCCGCAACTAGTGGAGTCGGAGCCGGTGAAGAAGCTCCAACGCTTGCCACCAGTGTTTAGTCGTGTGTTGGAGCTTCCATTCCCAAGGGATACCAATGTTCGTAAGCTCTTTACCACCAACGCTGACCTCTTTTTTGTGCCACATGGTGTCGGTGGTGAACCTGATGTTGTTAAGGTACACATTGTGAGACTCGAGCGCTGGGATATGACTAGGGTGGTGGTGCACATTGGACCTGGGGAGCCAGACTTAAGGAATGATCTAGTCTATGACAAGTGGCGCTTCCCCCTAGCTGAGACATCCATTCTATCGATGGTTATGGCAGGGTATGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI802484             [                                                                                                                                                                                                                                                                                                                                      TTAAGGAATGATCTAGTCTATGACAAGTGGCGCTTCCCCCTAGCTGAGACATCCATTCTATCGATGGTTAT GCAGGGTATGTGAATGGTCAACTCATTGTGGTTGTGCCCAGGATGGATGCAA CGGTGATGGTGGGAATGAGGGGATCCCAATGTGGCCCAACATTGATAAAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCGGATTCGGGCTTCTTGCTGGTGCAAGCTACATTCCTACCAAGTAGCACC ATCATTAGTGGTAACGGTGCAACTACTATAGTATACTAGTAGAGTTTTGCC ATAAGGTCTTCCACCAAATCCATCTTGTATGCCCAAACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCCTC TTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCC AAAGATCTATGCTTGGTCCAGTCAGTGTCATTGTAAC ATCAGTTGGTACCCATGGGCAAGCAATGTGTAAC AAAATAATAATATAAGTTTGCAAAAA            ]
[+] EMBL AU174462             [                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGTGCCCAGGATGGATGCAAGCGGTGATGGTGGGAATGAGGGGATCCCAATGTGGCCCAACATTGATAAAA   GAGGAGGAGGAGGAGGAGGAGGCGGCGGATTCGGGCTTCTTGCTGGTGCAAGCTACATTCCTACCAAGTAGCACC ATCATTTGTGGTAACGGTGCAACTACTATAGTATACTAGTAGAGTTTTGCCAATAAGGTCTTCCACCAAATCCATCTT TATGCCCAAACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCCTC TTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCCAAAATATCTATGCTTGGTCCAGTCAGTGTCATTGTAACAATCAGTTGGTA CCATGGGCAAGCAATGTGTAACAAAAATAATAATATAAGTTTGCAAAAAaa          ]
[+] EMBL BI800498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGAGGAGGAGGAGGCGGCGGATTCGGGCTTCTTGCTGGTGCAAGCTACATTCCTACCAAGTAGCACCTATCATTAGTGGTAACGGTGCAACTACTATAGTATACTAGTAGAGTTTTGCCAATAAGGTCTTCCACCAAATCCATCTT TATGCCCAAACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCCTCTTTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCCAAAAGATCTATGCTTGGTCCAGTCAGTGTCATTGTAACAATCAGTTGGTA CCATGGGCAAGC ATGTGTAACAAAAATAATAATATAAGTTTGCAACTTCGAGCGTAAAAA]
[+] EMBL BI801633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CATCTT TATGCCC AACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCCTC TTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCC AAAGATCTATGCTTGGTCCAGTCAGTGTCATTGTAAC ATCAGTTGGTA CCATGGGCAAGC ATGTGTAACAAAAATAATAATATAAGTTTGCAACTTCGAGCGTAAAAA]


>consensus_7976#0 AAAGAGAATCTCCTTGTAGTTTCTTGTTGTGTGCAAGAAGTAAGAGAGGAATTAGCTTGG TAGCCATGACAAAGACGCAGCCGCAACTAGTGGAGTCGGAGCCGGTGAAGAAGCTCCAAC GCTTGCCACCAGTGTTTAGTCGTGTGTTGGAGCTTCCATTCCCAAGGGATACCAATGTTC GTAAGCTCTTTACCACCAACGCTGACCTCTTTTTTGTGCCACATGGTGTCGGTGGTGAAC CTGATGTTGTTAAGGTACACATTGTGAGACTCGAGCGCTGGGATATGACTAGGGTGGTGG TGCACATTGGACCTGGGGAGCCAGACTTAAGGAATGATCTAGTCTATGACAAGTGGCGCT TCCCCCTAGCTGAGACATCCATTCTATCGATGGTTATGCAGGGTATGTGAATGGTCAACT CATTGTGGTTGTGCCCAGGATGGATGCAACGGTGATGGTGGGAATGAGGGGATCCCAATG TGGCCCAACATTGATAAAAGAGGAGGAGGAGGAGGAGGAGGAGGCGGCGGATTCGGGCTT CTTGCTGGTGCAAGCTACATTCCTACCAAGTAGCACCATCATTAGTGGTAACGGTGCAAC TACTATAGTATACTAGTAGAGTTTTGCCAATAAGGTCTTCCACCAAATCCATCTTTATGC CCAAACTAAGTAGCACCCTCCACCATCTTTGTTTTCTGGGTTTAAAGATGGATAGAACCC TCTTTTTTTTTGTTTGGTTTGGTTCAGATCGTTTCAGTTCATTAAAGTTTGGCCAAAGAT CTATGCTTGGTCCAGTCAGTGTCATTGTAACATCAGTTGGTACCATGGGCAAGCAATGTG TAACAAAAATAATAATATAAGTTTGCAAAAACGAGCGTAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)