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Oryza sativa
cluster # 7985 cluster # 7985       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7985#0 length = 1258 sequences # 3  
consensus_7985#1 length = 1236 sequences # 1  
consensus_7985#2 length = 731 sequences # 1  

consensusID : consensus_7985#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1258
fasta sequence
                              [CCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATTAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTGTCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACATAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCAAACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTCACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATGGAAAATGTTGATAATAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCAAATTATAGTACCTATACTTACAAGATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGATATTCCAGAGCTCCGAGTGCATTAGTATAGAAATTCATGCACGAACACAATATATATAAGGCGTTGCTGTCATGTACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCA]

[+] EMBL AK067059             [CCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATTAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTGTCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACATAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCAAACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTCACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATGGAAAATGTTGATAATAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCAAATTATAGTACCTATACTTACAAGATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGATATTCCAGAGCTCCGAGTGCATTAGTATAGAAATTCATGCACGAACACAATATATATAAGGCGTTGCTGTCATGTACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCA]
[+] EMBL AK072307             [CCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATTAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTGTCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACATAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCAAACCATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTCACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCCATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATGGAAAATGTTGATAATAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCAAATTATAGTACCTATACTTACAAGATGTTTGGGAGGTAGG                                                                                                                                          ]
[-] EMBL CB672022             [                                                     TGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCGGACATGTTCCCGTCGTAGCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATTAGAGCGGCTCACGACAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATACTCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCACCATGGCAACCGTCAAAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAATGGGCCCTGTCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATACGACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACATAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_7985#0 CCTGGCGCTGCGCGCAATCATGGGGGAGTGCTTCCGGTGGCGGGAGGAGTTCCTGGAGAC GCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTCGGCGTCGCCGACATGTTCCCGTCGTC GCGGCTCCTCCGCGCCGTCGGGAGCACGGTGCGCGACGTGAAGCTGCTGAACGCCAAGCT GTTCGAGCTGGTGGAGTGCGCCATCGAGCAGCATCGGGAGCAGATTAGAGCGGCTCACGA CAACGGCGGCGACGACGACGACGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATAC TCTGATGAGAATTCAGAAGGAAGGTGATGATCTTGATGACACTCACCATGGCAACCGTCA AAGCTGTCATTCTTGACATGTTTGCAGGTGGAAGTGAATCAACATCAACAACACTTGAAT GGGCCCTGTCAGAGCTTGTGAGGAACCCTCATGTGATGCAAAAGGCACAAGCAGAGATAC GACATGCTTTGCAAGGCAGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACC CAAAGAACATAATCAAGGAAACACTACGGTTACACCCTGTAGCACCTCTACTTGTCCCAA AAGAGTGTCAGGAGTCGTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGT TCGTAAATGCATGGGCTATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTA TGCCAGAGCGTTTTGAGAAAGTTGCAGTTGATTTCAGAGGCACAAACTTTGAGTTCAAAC CATTTGGAGCAGGACGGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAA TGGCCCTCACTGCTCTTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGG ATGGGTTGGACATGGAGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATC TACGACCGACACTCCATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATG GAAAATGTTGATAATAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCA AATTATAGTACCTATACTTACAAGATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGAT ATTCCAGAGCTCCGAGTGCATTAGTATAGAAATTCATGCACGAACACAATATATATAAGG CGTTGCTGTCATGTACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCA



consensusID : consensus_7985#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1236
fasta sequence
                              [AGGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTTGGCGCCATCGCCGCCGCCGCCGCCGCTCCCGGCGGCGATCAGCCGCCGCCGGTGAACGTGAGCTGGCAGATCGCCGGGGCGCTTACCGACCTGACGCTGCGCGCCATCATGGGGGAGTGCGGCTTCCGATGGCGGGAGGAGTTCCTGGAGACGCTGGGCGAGGCGCAGAGGAAGGCGAGCAGGTTCGGCGTCGCCGACCTGTTCCCGTCGTCGAGGCTCCTCCGCGCCGTCGGGAGCACGGCGGTGCGCGACGTGAGGGCGTTGAACGCCAAGCTGTTCGAGCTGGTGGACCGCGCCATCGAGCAGCACCGGGAGGCGGCGGCGACGACTGCGGCTGGCGGCGACCACGACGACGGCGGCGACGACGACGCGCGTGACGACAACGAGTGCTTGCTGAATACTCTCATGAGAATCCAGAAGGAAGGTGGTGGCACTCTCTCCATGTCAACAGTCAAAGCCGTTATTCTTGACATGTTTGCAGGTGGAAGCGAAACAACATCAACAATACTTGAATGGGCCATGTCAGAGCTTGTGAAGAATCCTCAAGTGATGCAGAAGGCGCAAGCACAGATACGACTTGCTTTGCAAGGAAGATCTAGAATAACAGAAGATGACTTGATAAATTTAAGTTACCCAAAGAATATAATCAAGGAAACACTAAGACTGCATCCTGTAGCACCCCTACTTATGCCAAAAGAGTGTCAAGAGTCATGCAAAATATTAGGATATAACATTCCAAAAGGGTCAATCATGTTGGTGAATGTATGGGCCATCGGTAGAGACCACAGATATTGGGATGATGCGGAAGTATTTTTGCCAAAGCGTTTTGAGGAAATCACAGTTGATTTTGGAGGCACAAACTATGAATTCATACCATTTGGGGGAGGACGGAGAATATGTCCAGGCATAACATTTGCACATGCCACACTCGAGTTGGCCCTCACTGCTCTCCTATACCATTTTGATTGGCATCTTCCTCCTAGTGTTACACCAGATGGGTTGGACATGGAAGAGGAATTCGGGATGAACGTTCGTAGAAAAAGGGATCTTCATCTACATCCAGTAATTCATGTTGGAGTAAAAAAGGTATAATGAGCTAGATATATGGTTAATGTAAGTGCATTTTTATAGGTGTGTATCGACTTCTTGAATAATCATCCTCAATAAAGTTGCACGACTCTC]

[+] EMBL AK108697             [AGGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTTGGCGCCATCGCCGCCGCCGCCGCCGCTCCCGGCGGCGATCAGCCGCCGCCGGTGAACGTGAGCTGGCAGATCGCCGGGGCGCTTACCGACCTGACGCTGCGCGCCATCATGGGGGAGTGCGGCTTCCGATGGCGGGAGGAGTTCCTGGAGACGCTGGGCGAGGCGCAGAGGAAGGCGAGCAGGTTCGGCGTCGCCGACCTGTTCCCGTCGTCGAGGCTCCTCCGCGCCGTCGGGAGCACGGCGGTGCGCGACGTGAGGGCGTTGAACGCCAAGCTGTTCGAGCTGGTGGACCGCGCCATCGAGCAGCACCGGGAGGCGGCGGCGACGACTGCGGCTGGCGGCGACCACGACGACGGCGGCGACGACGACGCGCGTGACGACAACGAGTGCTTGCTGAATACTCTCATGAGAATCCAGAAGGAAGGTGGTGGCACTCTCTCCATGTCAACAGTCAAAGCCGTTATTCTTGACATGTTTGCAGGTGGAAGCGAAACAACATCAACAATACTTGAATGGGCCATGTCAGAGCTTGTGAAGAATCCTCAAGTGATGCAGAAGGCGCAAGCACAGATACGACTTGCTTTGCAAGGAAGATCTAGAATAACAGAAGATGACTTGATAAATTTAAGTTACCCAAAGAATATAATCAAGGAAACACTAAGACTGCATCCTGTAGCACCCCTACTTATGCCAAAAGAGTGTCAAGAGTCATGCAAAATATTAGGATATAACATTCCAAAAGGGTCAATCATGTTGGTGAATGTATGGGCCATCGGTAGAGACCACAGATATTGGGATGATGCGGAAGTATTTTTGCCAAAGCGTTTTGAGGAAATCACAGTTGATTTTGGAGGCACAAACTATGAATTCATACCATTTGGGGGAGGACGGAGAATATGTCCAGGCATAACATTTGCACATGCCACACTCGAGTTGGCCCTCACTGCTCTCCTATACCATTTTGATTGGCATCTTCCTCCTAGTGTTACACCAGATGGGTTGGACATGGAAGAGGAATTCGGGATGAACGTTCGTAGAAAAAGGGATCTTCATCTACATCCAGTAATTCATGTTGGAGTAAAAAAGGTATAATGAGCTAGATATATGGTTAATGTAAGTGCATTTTTATAGGTGTGTATCGACTTCTTGAATAATCATCCTCAATAAAGTTGCACGACTCTC]


>consensus_7985#1 AGGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTTGGCGCC ATCGCCGCCGCCGCCGCCGCTCCCGGCGGCGATCAGCCGCCGCCGGTGAACGTGAGCTGG CAGATCGCCGGGGCGCTTACCGACCTGACGCTGCGCGCCATCATGGGGGAGTGCGGCTTC CGATGGCGGGAGGAGTTCCTGGAGACGCTGGGCGAGGCGCAGAGGAAGGCGAGCAGGTTC GGCGTCGCCGACCTGTTCCCGTCGTCGAGGCTCCTCCGCGCCGTCGGGAGCACGGCGGTG CGCGACGTGAGGGCGTTGAACGCCAAGCTGTTCGAGCTGGTGGACCGCGCCATCGAGCAG CACCGGGAGGCGGCGGCGACGACTGCGGCTGGCGGCGACCACGACGACGGCGGCGACGAC GACGCGCGTGACGACAACGAGTGCTTGCTGAATACTCTCATGAGAATCCAGAAGGAAGGT GGTGGCACTCTCTCCATGTCAACAGTCAAAGCCGTTATTCTTGACATGTTTGCAGGTGGA AGCGAAACAACATCAACAATACTTGAATGGGCCATGTCAGAGCTTGTGAAGAATCCTCAA GTGATGCAGAAGGCGCAAGCACAGATACGACTTGCTTTGCAAGGAAGATCTAGAATAACA GAAGATGACTTGATAAATTTAAGTTACCCAAAGAATATAATCAAGGAAACACTAAGACTG CATCCTGTAGCACCCCTACTTATGCCAAAAGAGTGTCAAGAGTCATGCAAAATATTAGGA TATAACATTCCAAAAGGGTCAATCATGTTGGTGAATGTATGGGCCATCGGTAGAGACCAC AGATATTGGGATGATGCGGAAGTATTTTTGCCAAAGCGTTTTGAGGAAATCACAGTTGAT TTTGGAGGCACAAACTATGAATTCATACCATTTGGGGGAGGACGGAGAATATGTCCAGGC ATAACATTTGCACATGCCACACTCGAGTTGGCCCTCACTGCTCTCCTATACCATTTTGAT TGGCATCTTCCTCCTAGTGTTACACCAGATGGGTTGGACATGGAAGAGGAATTCGGGATG AACGTTCGTAGAAAAAGGGATCTTCATCTACATCCAGTAATTCATGTTGGAGTAAAAAAG GTATAATGAGCTAGATATATGGTTAATGTAAGTGCATTTTTATAGGTGTGTATCGACTTC TTGAATAATCATCCTCAATAAAGTTGCACGACTCTC



consensusID : consensus_7985#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [TCTTTCTCTCCCCTTCCACCGTCCGCGGGGAGCACGGGTTGAAGCGGCGACGGGGCGGGGGCTGGAGTGGTGGTGACCGGTGGGAGCTGAAGCGGCGGTGGCGGTAGCGGGCTAGAGCTAACGCGGGTGGAGGCGGTAGGAGAAGGAGGCGGCGGCGATGGAAACCGCCCCACGCCACAGACCTCCAACGAGGCGGCTGCGGCTGCCTCCGACAAGCGCGTTGGATTATCCCCAGCCTCCGTAAGCTCCAGCCCACTGCCACCGCTGCTCCAGCTAGCTCCGGCTCCCGACGACGCCGAACCAGGTCACCTTCTTCTGCGCCTCGCCCAACGTCTTCAGGAACTCCTCACGCCACCGGAAGCCGCACTCCCCCATGATGGCGCGCAACGTCAGGTTGGTTAGCGTCCCGGTGATCTGCCTGCTCACGTTCAGTGCCGGCGGTGGCGGCGATGGCGCTGACGAGGCGGGCGACCTGCTCCTCCCTAGCGGAACGAGCGCACCTTGCCGAAGAGTACCCCCCCCCCCCCGGTGGCGTCGATGGAGTTCCTCACTGTACGCCCAGCCATGGAGGTGGGAGCCCCCGGGCTAGGCGCCAGGAGGAGGCCGAGCTCCATCCTCGACTTTGGCCATGATGGTATGCATGTAGCAACTCCTGCCTTGGGACGAAGGCAAGGCATATCATCACCTTCTCGGCATGATTTGTGATGAGCAGGAATTAGTAATCGAGCTAC]

[+] EMBL AK107829             [TCTTTCTCTCCCCTTCCACCGTCCGCGGGGAGCACGGGTTGAAGCGGCGACGGGGCGGGGGCTGGAGTGGTGGTGACCGGTGGGAGCTGAAGCGGCGGTGGCGGTAGCGGGCTAGAGCTAACGCGGGTGGAGGCGGTAGGAGAAGGAGGCGGCGGCGATGGAAACCGCCCCACGCCACAGACCTCCAACGAGGCGGCTGCGGCTGCCTCCGACAAGCGCGTTGGATTATCCCCAGCCTCCGTAAGCTCCAGCCCACTGCCACCGCTGCTCCAGCTAGCTCCGGCTCCCGACGACGCCGAACCAGGTCACCTTCTTCTGCGCCTCGCCCAACGTCTTCAGGAACTCCTCACGCCACCGGAAGCCGCACTCCCCCATGATGGCGCGCAACGTCAGGTTGGTTAGCGTCCCGGTGATCTGCCTGCTCACGTTCAGTGCCGGCGGTGGCGGCGATGGCGCTGACGAGGCGGGCGACCTGCTCCTCCCTAGCGGAACGAGCGCACCTTGCCGAAGAGTACCCCCCCCCCCCCGGTGGCGTCGATGGAGTTCCTCACTGTACGCCCAGCCATGGAGGTGGGAGCCCCCGGGCTAGGCGCCAGGAGGAGGCCGAGCTCCATCCTCGACTTTGGCCATGATGGTATGCATGTAGCAACTCCTGCCTTGGGACGAAGGCAAGGCATATCATCACCTTCTCGGCATGATTTGTGATGAGCAGGAATTAGTAATCGAGCTAC]


>consensus_7985#2 TCTTTCTCTCCCCTTCCACCGTCCGCGGGGAGCACGGGTTGAAGCGGCGACGGGGCGGGG GCTGGAGTGGTGGTGACCGGTGGGAGCTGAAGCGGCGGTGGCGGTAGCGGGCTAGAGCTA ACGCGGGTGGAGGCGGTAGGAGAAGGAGGCGGCGGCGATGGAAACCGCCCCACGCCACAG ACCTCCAACGAGGCGGCTGCGGCTGCCTCCGACAAGCGCGTTGGATTATCCCCAGCCTCC GTAAGCTCCAGCCCACTGCCACCGCTGCTCCAGCTAGCTCCGGCTCCCGACGACGCCGAA CCAGGTCACCTTCTTCTGCGCCTCGCCCAACGTCTTCAGGAACTCCTCACGCCACCGGAA GCCGCACTCCCCCATGATGGCGCGCAACGTCAGGTTGGTTAGCGTCCCGGTGATCTGCCT GCTCACGTTCAGTGCCGGCGGTGGCGGCGATGGCGCTGACGAGGCGGGCGACCTGCTCCT CCCTAGCGGAACGAGCGCACCTTGCCGAAGAGTACCCCCCCCCCCCCGGTGGCGTCGATG GAGTTCCTCACTGTACGCCCAGCCATGGAGGTGGGAGCCCCCGGGCTAGGCGCCAGGAGG AGGCCGAGCTCCATCCTCGACTTTGGCCATGATGGTATGCATGTAGCAACTCCTGCCTTG GGACGAAGGCAAGGCATATCATCACCTTCTCGGCATGATTTGTGATGAGCAGGAATTAGT AATCGAGCTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7985#0      ------------------------------------------------------------
consensus_7985#1      AGGCGGGTGCGCTCGTTCCGCCCCATCCGGGAGGAGCAGGTCGCCCGCCTCGTTGGCGCC 60
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      ------------------------------------------------------------
consensus_7985#1      ATCGCCGCCGCCGCCGCCGCTCCCGGCGGCGATCAGCCGCCGCCGGTGAACGTGAGCTGG 120
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      -----------------------CCTGGCGCTGCGCGCAATCATGGGGGAGTGC---TTC 34
consensus_7985#1      CAGATCGCCGGGGCGCTTACCGACCTGACGCTGCGCGCCATCATGGGGGAGTGCGGCTTC 180
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      CGGTGGCGGGAGGAGTTCCTGGAGACGCTGGCGGAGGCGCTCAAGAAGACGACCGGGCTC 94
consensus_7985#1      CGATGGCGGGAGGAGTTCCTGGAGACGCTGGGCGAGGCGCAGAGGAAGGCGAGCAGGTTC 240
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      GGCGTCGCCGACATGTTCCCGTCGTCGCGGCTCCTCCGCGCCGTCGGGAGCACGG---TG 151
consensus_7985#1      GGCGTCGCCGACCTGTTCCCGTCGTCGAGGCTCCTCCGCGCCGTCGGGAGCACGGCGGTG 300
consensus_7985#2      -------------TCTTTCTCTCCCC----TTCCACCGT-CCGCGGGGAGCACGGGTTGA 42
                                   * ** *  **  *     *** ***  ***  **********     

consensus_7985#0      CGCGACGTGAAGCTGCTGAACGCCAAGCTGTTCGAGCTGGTGGAGTGCGCCATCGAGCAG 211
consensus_7985#1      CGCGACGTGAGGGCGTTGAACGCCAAGCTGTTCGAGCTGGTGGACCGCGCCATCGAGCAG 360
consensus_7985#2      AGCGGCGACGGGGCGGGGGCTG--GAGTGGTGGTGACCGGTGGGA-GCTGAAGCG-GCGG 98
                       *** **    *  *  *   *   **  **     * *****   **   * ** ** *

consensus_7985#0      CATCGGGAGCAG------ATTAGAGCGGCTCACGACAAC----GGCGGCGACGACGACGA 261
consensus_7985#1      CACCGGGAGGCGGCGGCGACGACTGCGGCTGGCGGCGAC----CACGACGACGGCGGCGA 416
consensus_7985#2      TGGCGGTAGCGGGCTAGAGCTAACGCGGGTGGAGGCGGTAGGAGAAGGAGGCGGCGGCGA 158
                         *** **  *         *  **** *   * *          *  * ** ** ***

consensus_7985#0      CGCGCATGGCCATGGCGACAAGGAGTGCTTCCTGAATACTCTGATGAGAATTCAGAAGGA 321
consensus_7985#1      CGACGACGCGCGTGACGACAACGAGTGCTTGCTGAATACTCTCATGAGAATCCAGAAGGA 476
consensus_7985#2      TGGAAAC-CGCCCCACGCCACAGACCTCCAACGAGGCGGCTGCGGCTGCCTCCGACAAGC 217
                       *   *    *    ** **  **   *   *               *  * *   * * 

consensus_7985#0      AGGTGATGATCTTGATGACACTCACCATGGCAACCGTCAAAGCTGTCATT-CTTGACATG 380
consensus_7985#1      AGGTGGTGGC-------ACTCTCTCCATGTCAACAGTCAAAGCCGTTATT-CTTGACATG 528
consensus_7985#2      GCGTTG-GATTATCCCCAGCCTCCGTAAGCTCCAGCCCACTGCCACCGCTGCTCCAGCTA 276
                        **   *         *  ***   * *        **  **      * **  *  * 

consensus_7985#0      TTTGCAGGTGGAAGTGAATCAACATCAA-CAACACTTGAATGGGCCCTGTCAGAGCTTGT 439
consensus_7985#1      TTTGCAGGTGGAAGCGAAACAACATCAA-CAATACTTGAATGGGCCATGTCAGAGCTTGT 587
consensus_7985#2      GCTCCGGCTCCCGACGACGCCGAACCAGGTCACCTTCTTCTGCGCCTCGCCCAACGTCTT 336
                        * * * *      **  *   * **    *   *    ** ***  * *  *  *  *

consensus_7985#0      GAGGAA-CCCTCATGTGATGCAAAAGGCACAAGCAGAGAT-ACGACATGCTTTGCAAGGC 497
consensus_7985#1      GAAGAA-TCCTCAAGTGATGCAGAAGGCGCAAGCACAGAT-ACGACTTGCTTTGCAAGGA 645
consensus_7985#2      CAGGAACTCCTCACGCCAC-CGGAAGCCGCACTCCCCCATGATGGCGCGCAACGTCAGGT 395
                       * ***  ***** *  *  *  *** * **  *    ** * * *  **   *  *** 

consensus_7985#0      AGGACTAGGGTAACTGAAGATGATTTAATTAATTTAAAGTACCCAAAGAACATAATCAAG 557
consensus_7985#1      AGATCTAGAATAACAGAAGATGACTTGATAAATTTAAGTTACCCAAAGAATATAATCAAG 705
consensus_7985#2      TGGT-TAGCGTCCCGGTGATCTGCCTGCTCACGTTCAGTG--CCGGCGGTGGCGGCGATG 452
                       *   ***  *  * *         *  * *  ** *     **   *         * *

consensus_7985#0      GAAACACTACGGTTA-CACCCTGTAGCACCTCTACTTGTCCCAAAAGAGTGTCAGGAGTC 616
consensus_7985#1      GAAACACTAAGACTG-CATCCTGTAGCACCCCTACTTATGCCAAAAGAGTGTCAAGAGTC 764
consensus_7985#2      GCGCTGACGAGGCGGGCGACCTG-----CTCCTCCCTA-GCGGAACGAGCGC-----ACC 501
                      *         *     *  ****     *  ** * *   *  ** *** *        *

consensus_7985#0      GTGTAAAATCCTCGGCTATGATGTTCCTAAGGGAACAATCATGTTCGTAAATGCATGGGC 676
consensus_7985#1      ATGCAAAATATTAGGATATAACATTCCAAAAGGGTCAATCATGTTGGTGAATGTATGGGC 824
consensus_7985#2      TTGCCGAAGAGTAC-CCCCCCCCCCCCGGTGGCGTCGATGGAGTTCCTCACTGTACGC-C 559
                       **   **   *             **    *   * **   ***  * * ** * *  *

consensus_7985#0      TATCGGCAGAGACCCTAGATATTGGAACGATGCAGAAGTGTTTATGCCAGAGCGTTTTGA 736
consensus_7985#1      CATCGGTAGAGACCACAGATATTGGGATGATGCGGAAGTATTTTTGCCAAAGCGTTTTGA 884
consensus_7985#2      CAGCCATGGAGGTGGGAGCCCCCGGGCTAG-GCGCCAGGAG--GAGGCCGAGCTCCATCC 616
                       * *    ***     **     **      **   **       * *  ***    *  

consensus_7985#0      GAAAGTTGCAGTTGATTTCAGAGGCACAAAC-TTTGAGTTCAAACCATTTGGAGCAGGAC 795
consensus_7985#1      GGAAATCACAGTTGATTTTGGAGGCACAAAC-TATGAATTCATACCATTTGGGGGAGGAC 943
consensus_7985#2      TCGACT-----TTGGCCATGATGGTATGCATGTAGCAACTCCTGCC-TTGGGACGAAGGC 670
                         * *     ***        ** *   *  *   *  **   ** ** **   * * *

consensus_7985#0      GGAGGATGTGCCCAGGAATAACATTTGCAAATGCAACAATCGAAATGGCCCTCACTGCTC 855
consensus_7985#1      GGAGAATATGTCCAGGCATAACATTTGCACATGCCACACTCGAGTTGGCCCTCACTGCTC 1003
consensus_7985#2      AAGGCATAT-------CATCACCTTCTCG---GCATGATTTGTGATGAGCAGGAATTAGT 720
                         * ** *        ** ** **  *    **   * * *   **  *   * *    

consensus_7985#0      TTCTATACCACTTCGATTGGCATCTCCCTCCAGGTGTAACACCGGATGGGTTGGACATGG 915
consensus_7985#1      TCCTATACCATTTTGATTGGCATCTTCCTCCTAGTGTTACACCAGATGGGTTGGACATGG 1063
consensus_7985#2      AATCGAGCTAC------------------------------------------------- 731
                             * *                                                  

consensus_7985#0      AGGAGGAATTCGGCATGAGCGTTTCAAGGAAAAGGGATCTTTATCTACGACCGACACTCC 975
consensus_7985#1      AAGAGGAATTCGGGATGAACGTTCGTAGAAAAAGGGATCTTCATCTACATCCAGTAATTC 1123
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      ATATGGGACTTGAAACAATATGATGAATACACGCGTGTTGTCATGGAAAATGT-TGATAA 1034
consensus_7985#1      ATGTTGGAGTAAAAAAGGTATAATGAGC-TAGATATATGGTTAATGTAAGTGCATTTTTA 1182
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      TAGCCGAATGGTGTATGTACCTAGTAGAAAAAAAATACTTTCTGCAAATTATAGTACCTA 1094
consensus_7985#1      TAGGTG-----TGTATCGACTTC-TTGAATAATCATCCTCAATA-AAGTTGCACGACTCT 1235
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      TACTTACAAGATGTTTGGGAGGTAGGAACTCCTGAGATATTCAGATATTCCAGAGCTCCG 1154
consensus_7985#1      C----------------------------------------------------------- 1236
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      AGTGCATTAGTATAGAAATTCATGCACGAACACAATATATATAAGGCGTTGCTGTCATGT 1214
consensus_7985#1      ------------------------------------------------------------
consensus_7985#2      ------------------------------------------------------------
                                                                                  

consensus_7985#0      ACAAGAGCTGTGTTTTTTAAAGATAAAAGTACTGTACGTTTCCA 1258
consensus_7985#1      --------------------------------------------
consensus_7985#2      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)