cluster # 8002

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Oryza sativa
cluster # 8002 cluster # 8002 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8002#0 length = 2552 sequences # 5
consensusID : consensus_8002#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2552
fasta sequence
                              [CCCCCAAAACCCCCCTGCCTTCTCTCGCCGATTCCGCCACCGCCGCCGCGCCGCGCCTCGCCGCCGGCCGCCCTTCGATCTCCTCCTCCTCCTCGGAATGGATCTCTACATGGACGACTACATCGACCCCTACGAGGAGGCCGAGGCGGAGGCCGCCGCGGAAGCCGCCGGGCTGACGTCCGCGGCAGCGGCGGAGGACTCCTCCGACGAGGGCGACTCCGAGGACGACTCCGAGGCCGAGAGCGACTACGAGGAGAGGTCCTACGGCCTCCTCCGCTCCGGCAACCACCGCGTGCGCAACCCGGACGGCACCTTCCGCTGCCCCTTCTGCCCCGGCAAGAAGAAGCAGGACTACAAGCTCAAGGACCTCCTCCAGCACGCCGACGGCATTGGCGCCTCCAGCAAGCGCCGCCGCCACGGCCGCGAGCGCGCCTTCCACCGCGCCTTCGCCCGATTCGTCCGCACCGACCCTTCCTTCGCCCAAGACCTCGCCGCCATCAACGGGATCGCCACCACTGCTGATGCTATCTCTAATTCTAGTGCTGCCGGTGCCAAGGAGAAGGCGGATGCCAATGGCGACACAGACGGATCCGCTTCGGTGGCGGCTGTGGCCGCGGGGAATAGACGGGAGGAGGAGAGGTTTGCTTGGCCATGGAGTGGGGTTCTTGCAGCTGGTGCAGGGTTCAATGCCGAGGACTTCGCGGATAGGGTCGCAATGTTTGGTTTGGATGATGTTGTGCCTTTAGTTGTCGATGATGCGGAAGGCGCTGATAGCTTTGC-GATTGTGAGGTTCGCTAATGGTTGGGGTGGATTCGGCGATGCGCTCACGCTCGAGAACCATTTCAACAAGAATAAGCTTGGGAAGAATGAATGGGATGCAAGGGGTAGTGCTGGAGATGCTGTGAAGGGAGATGATGGGGACACAGATGTTAAGGTTTATGGTTGGGTTGCCCGAGAAGGGGACTATAATGCCGGGAATGTGGTGGGCAGGTATTTGAGGAAGCATACGAACCTGACAACCATAGATGAGGTCTCCAAGAGTGAATCGGAAAAGTCGGGGAAGATGGTAGCGATACTGGCAACTCAGATCGAGGCGAAAAATCGATTCTTGCAGGACTTGGAGACAAAAAAGAATGCAACCGAACTCTCCATTGCACGGCTCGAGGAGGACAACAGGAAGCTACACGATGCATATAATGAAGAAATGCGCAATCTACACCGGAGAGCTCGTGATTATGCTTTAAGAGTTTTCCAGGATAATGAAAACTTGAAGCTTGAATTAGATAGCAGGAGGAGAGAATTGAATTCACGTGCTAAGCAGCTTGAAAAGATAACAGCTGAGAATGCAAGCGACAGGAAAAAACTTGATGATCAGAAGCAAAAGGCAAAGGATGATAATAGTGAACTTGAGCTAGCAAGCATAGAACAGCAGAGGGCTGATGAAGATGTAATGAAGCTAGTTGAGGATCAGAAGAG-GGAAAAGGAAGATGTCCTTGCAAGAATGCTTCAGCTGGAAAAAGAGCTGCATGAAAAACAACAGCTTGAGCTTGAAGTAACACGGCTGAATGGTACACTTCAAGTGATGAAGCATTTGGAAGGAGACGATGATGGGGATATTCATGATAAGATGGAGAAATTGAGTGAAAGATTAGAACATGAAAAGAAACGTTT-GGAAGAATTGAGCGGAGAGCTGG-TGAAGAAAGAACGTGAAAGCAACGATGAGTTA-CAAGAGGCCAGAAAAGAACTGATAATGGGTTTGGAGGACATGCTAACTGGGCGAACTGCTATTGGGATAAAAAGGATGGGGGAACTTGATGAGAAACCTTTCCAAAATGCATGCAAGAGAAAGTACGGAAACGATGACTATGAGATCAAAGCTGCGGAGCTGGTCTCAAGTTGGCAGGAGGAAATAAAGAAGCCATCCTGGCATCCTTATAAGATTATAACGGTTGATGGCGAAGATAAGGAAGTTGTAGATGATGACGACACGAAGCTGCGGCACTTGTGGATCGAGTACGGTGACGATGTGTGCAATGCAGTGAAGACCGCCCTGAGCGAGGTCAATGAGTACAATGCCAGTGGACGGTATGTTGTGCCCGAGCTGTGGAACTTCAGGAAAGGCCGAAAGGCGACAATGAAGGAGGTGCTCAAGTACATCTTTGGACAGATAGAGACAACCAGCAAGCGCAGGAGGCCGTGAAGTTCGTCCTTCGATGGATGAAGAAGCTGACAGGCAAGCGAAGGATGG--TTTGAGG-TGCTGGGTATTGGTGCTAGGTATCAAGAGCTGCTGCCTTCTGTTATCATCTCAGGTCAGGTTGGAGGCGCTGGTCAATTGATGGGTCTAAGTTGATGAATACTAGTGTATTGATCAATGGATGCCCATAAGGCTGTGCCAATCCTTAGTTATAATGATTATGGTTATGGTCAGTGTCAGGCTGTAGAAATAATCCTGTGTTGTGTCCCTTTGAGTTGTAGAATAATCGTCTGTAATAATTTCGATATACTTTCGTGGTCCAAGACATCATAAATCTAAGTGATTAGCTACTAAAAAA]

[+] EMBL AK066686             [CCCCCAAAACCCCCCTGCCTTCTCTCGCCGATTCCGCCACCGCCGCCGCGCCGCGCCTCGCCGCCGGCCGCCCTTCGATCTCCTCCTCCTCCTCGGAATGGATCTCTACATGGACGACTACATCGACCCCTACGAGGAGGCCGAGGCGGAGGCCGCCGCGGAAGCCGCCGGGCTGACGTCCGCGGCAGCGGCGGAGGACTCCTCCGACGAGGGCGACTCCGAGGACGACTCCGAGGCCGAGAGCGACTACGAGGAGAGGTCCTACGGCCTCCTCCGCTCCGGCAACCACCGCGTGCGCAACCCGGACGGCACCTTCCGCTGCCCCTTCTGCCCCGGCAAGAAGAAGCAGGACTACAAGCTCAAGGACCTCCTCCAGCACGCCGACGGCATTGGCGCCTCCAGCAAGCGCCGCCGCCACGGCCGCGAGCGCGCCTTCCACCGCGCCTTCGCCCGATTCGTCCGCACCGACCCTTCCTTCGCCCAAGACCTCGCCGCCATCAACGGGATCGCCACCACTGCTGATGCTATCTCTAATTCTAGTGCTGCCGGTGCCAAGGAGAAGGCGGATGCCAATGGCGACACAGACGGATCCGCTTCGGTGGCGGCTGTGGCCGCGGGGAATAGACGGGAGGAGGAGAGGTTTGCTTGGCCATGGAGTGGGGTTCTTGCAGCTGGTGCAGGGTTCAATGCCGAGGACTTCGCGGATAGGGTCGCAATGTTTGGTTTGGATGATGTTGTGCCTTTAGTTGTCGATGATGCGGAAGGCGCTGATAGCTTTGC GATTGTGAGGTTCGCTAATGGTTGGGGTGGATTCGGCGATGCGCTCACGCTCGAGAACCATTTCAACAAGAATAAGCTTGGGAAGAATGAATGGGATGCAAGGGGTAGTGCTGGAGATGCTGTGAAGGGAGATGATGGGGACACAGATGTTAAGGTTTATGGTTGGGTTGCCCGAGAAGGGGACTATAATGCCGGGAATGTGGTGGGCAGGTATTTGAGGAAGCATACGAACCTGACAACCATAGATGAGGTCTCCAAGAGTGAATCGGAAAAGTCGGGGAAGATGGTAGCGATACTGGCAACTCAGATCGAGGCGAAAAATCGATTCTTGCAGGACTTGGAGACAAAAAAGAATGCAACCGAACTCTCCATTGCACGGCTCGAGGAGGACAACAGGAAGCTACACGATGCATATAATGAAGAAATGCGCAATCTACACCGGAGAGCTCGTGATTATGCTTTAAGAGTTTTCCAGGATAATGAAAACTTGAAGCTTGAATTAGATAGCAGGAGGAGAGAATTGAATTCACGTGCTAAGCAGCTTGAAAAGATAACAGCTGAGAATGCAAGCGACAGGAAAAAACTTGATGATCAGAAGCAAAAGGCAAAGGATGATAATAGTGAACTTGAGCTAGCAAGCATAGAACAGCAGAGGGCTGATGAAGATGTAATGAAGCTAGTTGAGGATCAGAAGAG GGAAAAGGAAGATGTCCTTGCAAGAATGCTTCAGCTGGAAAAAGAGCTGCATGAAAAACAACAGCTTGAGCTTGAAGTAACACGGCTGAATGGTACACTTCAAGTGATGAAGCATTTGGAAGGAGACGATGATGGGGATATTCATGATAAGATGGAGAAATTGAGTGAAAGATTAGAACATGAAAAGAAACGTTT GGAAGAATTGAGCGGAGAGCTGG TGAAGAAAGAACGTGAAAGCAACGATGAGTTA CAAGAGGCCAGAAAAGAACTGATAATGGGTTTGGAGGACATGCTAACTGGGCGAACTGCTATTGGGATAAAAAGGATGGGGGAACTTGATGAGAAACCTTTCCAAAATGCATGCAAGAGAAAGTACGGAAACGATGACTATGAGATCAAAGCTGCGGAGCTGGTCTCAAGTTGGCAGGAGGAAATAAAGAAGCCATCCTGGCATCCTTATAAGATTATAACGGTTGATGGCGAAGATAAGGAAGTTGTAGATGATGACGACACGAAGCTGCGGCACTTGTGGATCGAGTACGGTGACGATGTGTGCAATGCAGTGAAGACCGCCCTGAGCGAGGTCAATGAGTACAATGCCAGTGGACGGTATGTTGTGCCCGAGCTGTGGAACTTCAGGAAAGGCCGAAAGGCGACAATGAAGGAGGTGCTCAAGTACATCTTTGGACAGATAGAGACAACCAGCAAGCGCAGGAGGCCGTGAAGTTCGTCCTTCGATGGATGAAGAAGCTGACAGGCAAGCGAAGGATGG  TTTGAGG TGCTGGGTATTGGTGCTAGGTATCAAGAGCTGCTGCCTTCTGTTATCATCTCAGGTCAGGTTGGAGGCGCTGGTCAATTGATGGGTCTAAGTTGATGAATACTAGTGTATTGATCAATGGATGCCCATAAGGCTGTGCCAATCCTTAGTTATAATGATTATGGTTATGGTCAGTGTCAGGCTGTAGAAATAATCCTGTGTTGTGTCCCTTTGAGTTGTAGAATAATCGTCTGTAATAATTTCGATATACTTTCGTGGTCCAAGACATCATAAATCTAAGTG                ]
[+] EMBL CB639802             [            CCCTGCCTTCTCTCGCCGATTCCGCCACCGCCGCCGCGCCGCGCCTCGCCGCCGGCCGCCCTTCGATCTCCTCCTCCTCCTCGGAATGGATCTCTACATGGACGACTACATCGACCCCTACGAGGAGGCCGAGGCGGAGGCCGCCGCGGAAGCCGCCGGGCTGACGTCCGCGGTTTTTGCGGAGGACTCCTCCGACGAGGGCGACTCCGAGGACGACTCCGAGGCCGAGAGCGACTACGAGGAGAGGTCCTACGGCCTCCTCCGCTCCGGCAACCACCGCGTGCGCAACCCGGACGGCACCTTCCGCTGCCCCTTCTGCCCCGGCAAGAAGAAGCAGGACTACAAGCTCAAGGACCTCCTCCAGCACGCCGACAGCATTGGCGCCTCCAGCAAGCGCCGCCGCCACGGCCGCGAGCGCGCCTTCCACCGCGCCTTCGCCCGATTCGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C27232               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGCCTTTAGTTGTCGATGATGCGGAAGGCGCTGATAGCTTTGCNGTGTGTGAGGTTCGCTAATGGTTGGGGTGGATTCGGCGATGCGCTCACGCTCGAGAACCATTTCAACAAGAATAAGCTTGGGAAGAATGAATGGGATGCAAGGGGTAGTGCTGGAGATGCTGTGAAGGGAGATGATGGGGACACAGATGTTAAGGTTTATGGTTGGGTTGCCCGAGAAGGGGACTATAATGCCGGGAATGTNGTGGGCAGGTATTTNAGGAAGCATACGAACCTGACAACCATAGATGAGGTCTCCAAGAGTGAATCGGAAAAGTCGGGGAAGATGGTAGCGATACTTGCAACTCAGATCGAGGCGAAAAATCGATTCTTGCAGGACTTGGAGACAAAAAAG ATGCAACCG ACTNT CATTGCAC GCTCGA GAAGAC ACAGG AGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU030178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAAAAAACTTGATGATCAGAAGCAAAAGGCAAAGGATGATAATAGTGAACTTGAGCTAGCAAGCATAGAACAGCAGAGGGCTGATGAAGATGTAATGAAGCTAGTTGAGGATCAGAAGAGCCGAAAAGGAAGATGTCCTTGCAAGAATGCTTCAGCTGGAAAAAGAGCTGCATGAAAAACAACAGCTTGAGCTTGAAGTAACACGGCTGAATGGTACACTTCAAGTGATGAAGCATTTGGAAGGAGACGATGATGGGGATATTCATGATAAGATGGAG AATTGAGTGACAGATTAGACCATGAAAAG AACGTTTGGGAAGAATTGAGCGGAGANCTGGTTGAAGAAAG ACGTGAAAGC ACGATGAGTTACCAAGAGGCCAG AAAG ACTGATATTGGGTTTTGAGGACtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU030179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGGGTTTTGAGGTTGCTGGGTATTGGTNCTAGGTATCAAGAGCTGCTGCCTTCTGTTATCATCTCAGGTCAGGTTGGAGGCGCTGGTCAATTGATGGGTCTAAGTTGATGAATACTAGTGTATTGATCAATGGATGCCCATAAGGCTGTGCCAATCCTTAGTTATAATGATTATGGTTATGGTCAGTGTCAGGCTGTAGAAATAATCCTGTGTTGTGTCCCTTTGAATTGTAGAATAATCGTCTGTAATAATTTCGATATACTTTCGTGGTCCAAGACATCATAAATCTAAGTGATTAGCTACTAAAAAA]




>consensus_8002#0
CCCCCAAAACCCCCCTGCCTTCTCTCGCCGATTCCGCCACCGCCGCCGCGCCGCGCCTCG
CCGCCGGCCGCCCTTCGATCTCCTCCTCCTCCTCGGAATGGATCTCTACATGGACGACTA
CATCGACCCCTACGAGGAGGCCGAGGCGGAGGCCGCCGCGGAAGCCGCCGGGCTGACGTC
CGCGGCAGCGGCGGAGGACTCCTCCGACGAGGGCGACTCCGAGGACGACTCCGAGGCCGA
GAGCGACTACGAGGAGAGGTCCTACGGCCTCCTCCGCTCCGGCAACCACCGCGTGCGCAA
CCCGGACGGCACCTTCCGCTGCCCCTTCTGCCCCGGCAAGAAGAAGCAGGACTACAAGCT
CAAGGACCTCCTCCAGCACGCCGACGGCATTGGCGCCTCCAGCAAGCGCCGCCGCCACGG
CCGCGAGCGCGCCTTCCACCGCGCCTTCGCCCGATTCGTCCGCACCGACCCTTCCTTCGC
CCAAGACCTCGCCGCCATCAACGGGATCGCCACCACTGCTGATGCTATCTCTAATTCTAG
TGCTGCCGGTGCCAAGGAGAAGGCGGATGCCAATGGCGACACAGACGGATCCGCTTCGGT
GGCGGCTGTGGCCGCGGGGAATAGACGGGAGGAGGAGAGGTTTGCTTGGCCATGGAGTGG
GGTTCTTGCAGCTGGTGCAGGGTTCAATGCCGAGGACTTCGCGGATAGGGTCGCAATGTT
TGGTTTGGATGATGTTGTGCCTTTAGTTGTCGATGATGCGGAAGGCGCTGATAGCTTTGC
GATTGTGAGGTTCGCTAATGGTTGGGGTGGATTCGGCGATGCGCTCACGCTCGAGAACCA
TTTCAACAAGAATAAGCTTGGGAAGAATGAATGGGATGCAAGGGGTAGTGCTGGAGATGC
TGTGAAGGGAGATGATGGGGACACAGATGTTAAGGTTTATGGTTGGGTTGCCCGAGAAGG
GGACTATAATGCCGGGAATGTGGTGGGCAGGTATTTGAGGAAGCATACGAACCTGACAAC
CATAGATGAGGTCTCCAAGAGTGAATCGGAAAAGTCGGGGAAGATGGTAGCGATACTGGC
AACTCAGATCGAGGCGAAAAATCGATTCTTGCAGGACTTGGAGACAAAAAAGAATGCAAC
CGAACTCTCCATTGCACGGCTCGAGGAGGACAACAGGAAGCTACACGATGCATATAATGA
AGAAATGCGCAATCTACACCGGAGAGCTCGTGATTATGCTTTAAGAGTTTTCCAGGATAA
TGAAAACTTGAAGCTTGAATTAGATAGCAGGAGGAGAGAATTGAATTCACGTGCTAAGCA
GCTTGAAAAGATAACAGCTGAGAATGCAAGCGACAGGAAAAAACTTGATGATCAGAAGCA
AAAGGCAAAGGATGATAATAGTGAACTTGAGCTAGCAAGCATAGAACAGCAGAGGGCTGA
TGAAGATGTAATGAAGCTAGTTGAGGATCAGAAGAGGGAAAAGGAAGATGTCCTTGCAAG
AATGCTTCAGCTGGAAAAAGAGCTGCATGAAAAACAACAGCTTGAGCTTGAAGTAACACG
GCTGAATGGTACACTTCAAGTGATGAAGCATTTGGAAGGAGACGATGATGGGGATATTCA
TGATAAGATGGAGAAATTGAGTGAAAGATTAGAACATGAAAAGAAACGTTTGGAAGAATT
GAGCGGAGAGCTGGTGAAGAAAGAACGTGAAAGCAACGATGAGTTACAAGAGGCCAGAAA
AGAACTGATAATGGGTTTGGAGGACATGCTAACTGGGCGAACTGCTATTGGGATAAAAAG
GATGGGGGAACTTGATGAGAAACCTTTCCAAAATGCATGCAAGAGAAAGTACGGAAACGA
TGACTATGAGATCAAAGCTGCGGAGCTGGTCTCAAGTTGGCAGGAGGAAATAAAGAAGCC
ATCCTGGCATCCTTATAAGATTATAACGGTTGATGGCGAAGATAAGGAAGTTGTAGATGA
TGACGACACGAAGCTGCGGCACTTGTGGATCGAGTACGGTGACGATGTGTGCAATGCAGT
GAAGACCGCCCTGAGCGAGGTCAATGAGTACAATGCCAGTGGACGGTATGTTGTGCCCGA
GCTGTGGAACTTCAGGAAAGGCCGAAAGGCGACAATGAAGGAGGTGCTCAAGTACATCTT
TGGACAGATAGAGACAACCAGCAAGCGCAGGAGGCCGTGAAGTTCGTCCTTCGATGGATG
AAGAAGCTGACAGGCAAGCGAAGGATGGTTTGAGGTGCTGGGTATTGGTGCTAGGTATCA
AGAGCTGCTGCCTTCTGTTATCATCTCAGGTCAGGTTGGAGGCGCTGGTCAATTGATGGG
TCTAAGTTGATGAATACTAGTGTATTGATCAATGGATGCCCATAAGGCTGTGCCAATCCT
TAGTTATAATGATTATGGTTATGGTCAGTGTCAGGCTGTAGAAATAATCCTGTGTTGTGT
CCCTTTGAGTTGTAGAATAATCGTCTGTAATAATTTCGATATACTTTCGTGGTCCAAGAC
ATCATAAATCTAAGTGATTAGCTACTAAAAAA
clustalw multiple alignements is not computed in this case